Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3920

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
4,662,226	+		Psyr_3919	0.29	+0.7
4,662,227	-		Psyr_3919	0.30	+0.3
4,662,227	-		Psyr_3919	0.30	-2.4
4,662,244	+		Psyr_3919	0.31	+0.3
4,662,244	+		Psyr_3919	0.31	-0.0
4,662,244	+		Psyr_3919	0.31	-0.1
4,662,245	-		Psyr_3919	0.31	-0.3
4,662,245	-		Psyr_3919	0.31	-0.6
4,662,693	+		Psyr_3919	0.72	-1.3
4,662,694	-		Psyr_3919	0.72	+0.2
4,662,792	+		Psyr_3919	0.81	-1.0
4,662,792	+		Psyr_3919	0.81	-1.2
4,662,792	+		Psyr_3919	0.81	-1.2
4,662,793	-		Psyr_3919	0.81	-0.0
4,662,793	-		Psyr_3919	0.81	-0.0
4,662,793	-		Psyr_3919	0.81	+2.0
4,662,829	+		Psyr_3919	0.85	+0.3
4,662,830	-		Psyr_3919	0.85	+0.5
4,662,893	-				+1.3
4,663,003	-				-0.4
4,663,028	+				+1.3
4,663,047	+				-0.4
4,663,047	+				-0.5
4,663,048	-				+1.1
4,663,055	+				+0.1
4,663,056	-				-2.4
4,663,056	-				-0.5
4,663,256	+		Psyr_3920	0.39	+1.4
4,663,256	+		Psyr_3920	0.39	-1.4
4,663,256	+		Psyr_3920	0.39	+1.5
4,663,256	+		Psyr_3920	0.39	+1.8
4,663,256	+		Psyr_3920	0.39	+0.6
4,663,257	-		Psyr_3920	0.39	+1.7
4,663,257	-		Psyr_3920	0.39	+1.4
4,663,257	-		Psyr_3920	0.39	+0.8
4,663,295	+		Psyr_3920	0.52	+0.2
4,663,295	+		Psyr_3920	0.52	+2.4
4,663,295	+		Psyr_3920	0.52	+1.4
4,663,296	-		Psyr_3920	0.53	+0.3
4,663,296	-		Psyr_3920	0.53	+1.5
4,663,296	-		Psyr_3920	0.53	+0.4
4,663,301	+		Psyr_3920	0.55	-0.2
4,663,301	+		Psyr_3920	0.55	-1.4
4,663,301	+		Psyr_3920	0.55	-0.6
4,663,301	+		Psyr_3920	0.55	-1.6
4,663,301	+		Psyr_3920	0.55	-0.0
4,663,301	+		Psyr_3920	0.55	+0.7
4,663,301	+		Psyr_3920	0.55	+0.8
4,663,302	-		Psyr_3920	0.55	+1.0
4,663,302	-		Psyr_3920	0.55	-1.3
4,663,305	+		Psyr_3920	0.56	+0.6
4,663,305	+		Psyr_3920	0.56	+1.3
4,663,342	+		Psyr_3920	0.69	-1.0
4,663,457	+				-1.6
4,663,458	-				+2.3
4,663,461	+				+0.3
4,663,462	-				+0.5
4,663,463	+				+0.4
4,663,555	-				+0.2
4,663,590	+				-0.8
4,663,591	-				-0.1
4,663,591	-				+0.6
4,663,593	+				+1.9
4,663,594	-				+1.5
4,663,594	-				+0.7
4,663,686	+				+2.3
4,663,687	-				-0.0
4,663,693	-				-0.6
4,663,693	-				-0.2
4,663,693	-				-0.2
4,663,728	+				-0.0
4,663,969	+		Psyr_3921	0.22	-0.0
4,663,969	+		Psyr_3921	0.22	+0.4
4,663,969	+		Psyr_3921	0.22	-0.8
4,663,969	+		Psyr_3921	0.22	-0.2
4,663,969	+		Psyr_3921	0.22	+1.6
4,663,969	+		Psyr_3921	0.22	+1.0
4,663,969	+		Psyr_3921	0.22	-0.3
4,663,969	+		Psyr_3921	0.22	+1.6
4,663,969	+		Psyr_3921	0.22	-0.6
4,663,969	+		Psyr_3921	0.22	+0.1
4,663,969	+		Psyr_3921	0.22	-1.0
4,663,969	+		Psyr_3921	0.22	+1.3
4,663,969	+		Psyr_3921	0.22	-0.4
4,663,969	+		Psyr_3921	0.22	+0.7
4,663,969	+		Psyr_3921	0.22	-1.1
4,663,969	+		Psyr_3921	0.22	+0.3
4,663,970	-		Psyr_3921	0.22	+1.9
4,663,970	-		Psyr_3921	0.22	-1.0
4,663,970	-		Psyr_3921	0.22	+0.6
4,663,970	-		Psyr_3921	0.22	-1.0
4,663,970	-		Psyr_3921	0.22	-0.9
4,663,970	-		Psyr_3921	0.22	-0.8
4,663,970	-		Psyr_3921	0.22	-0.8
4,663,970	-		Psyr_3921	0.22	+0.8
4,663,970	-		Psyr_3921	0.22	+0.5
4,663,970	-		Psyr_3921	0.22	-0.3
4,663,970	-		Psyr_3921	0.22	-0.8
4,663,970	-		Psyr_3921	0.22	+0.5
4,663,970	-		Psyr_3921	0.22	-1.3
4,663,970	-		Psyr_3921	0.22	-2.3
4,663,980	+		Psyr_3921	0.23	+0.8
4,663,980	+		Psyr_3921	0.23	+0.3
4,663,980	+		Psyr_3921	0.23	+0.6
4,663,981	-		Psyr_3921	0.23	-0.6
4,663,981	-		Psyr_3921	0.23	-2.4
4,663,981	-		Psyr_3921	0.23	+0.5
4,663,981	-		Psyr_3921	0.23	-0.6
4,663,981	-		Psyr_3921	0.23	+0.2
4,663,981	-		Psyr_3921	0.23	+2.7
4,664,071	+		Psyr_3921	0.31	-2.8
4,664,071	+		Psyr_3921	0.31	-1.4
4,664,071	+		Psyr_3921	0.31	-1.6
4,664,071	+		Psyr_3921	0.31	-1.0
4,664,071	+		Psyr_3921	0.31	+0.4
4,664,071	+		Psyr_3921	0.31	-1.4
4,664,072	-		Psyr_3921	0.31	-0.0
4,664,072	-		Psyr_3921	0.31	-1.2
4,664,072	-		Psyr_3921	0.31	+0.1
4,664,072	-		Psyr_3921	0.31	+0.1
4,664,072	-		Psyr_3921	0.31	+0.7
4,664,155	+		Psyr_3921	0.38	-1.3
4,664,155	+		Psyr_3921	0.38	-1.3
4,664,155	+		Psyr_3921	0.38	+0.8
4,664,155	+		Psyr_3921	0.38	+0.6
4,664,155	+		Psyr_3921	0.38	+1.3
4,664,155	+		Psyr_3921	0.38	-1.4
4,664,155	+		Psyr_3921	0.38	+1.0
4,664,155	+		Psyr_3921	0.38	+1.5
4,664,155	+		Psyr_3921	0.38	+0.7
4,664,155	+		Psyr_3921	0.38	-1.0
4,664,155	+		Psyr_3921	0.38	+1.2
4,664,155	+		Psyr_3921	0.38	-1.0
4,664,155	+		Psyr_3921	0.38	+0.4
4,664,155	+		Psyr_3921	0.38	+0.2
4,664,155	+		Psyr_3921	0.38	+1.0
4,664,155	+		Psyr_3921	0.38	+0.4
4,664,155	+		Psyr_3921	0.38	+0.1
4,664,155	+		Psyr_3921	0.38	+1.6
4,664,156	-		Psyr_3921	0.38	-1.4
4,664,156	-		Psyr_3921	0.38	+0.6
4,664,156	-		Psyr_3921	0.38	+0.5
4,664,156	-		Psyr_3921	0.38	+0.8
4,664,156	-		Psyr_3921	0.38	-1.0
4,664,157	+		Psyr_3921	0.38	+1.3
4,664,157	+		Psyr_3921	0.38	+2.0
4,664,242	+		Psyr_3921	0.46	-2.0
4,664,281	+		Psyr_3921	0.49	-1.4
4,664,302	+		Psyr_3921	0.51	+1.7
4,664,302	+		Psyr_3921	0.51	-0.4
4,664,302	+		Psyr_3921	0.51	-0.4
4,664,302	+		Psyr_3921	0.51	-0.4
4,664,302	+		Psyr_3921	0.51	+0.2
4,664,302	+		Psyr_3921	0.51	+0.4
4,664,303	-		Psyr_3921	0.51	-2.0