Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1591

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
1,789,542	+		Psyr_1590	0.23	+0.4
1,789,542	+		Psyr_1590	0.23	-0.1
1,789,542	+		Psyr_1590	0.23	-2.1
1,789,542	+		Psyr_1590	0.23	+0.8
1,789,542	+		Psyr_1590	0.23	-0.2
1,789,542	+		Psyr_1590	0.23	-0.3
1,789,542	+		Psyr_1590	0.23	+1.3
1,789,542	+		Psyr_1590	0.23	-0.1
1,789,543	-		Psyr_1590	0.23	-1.7
1,789,543	-		Psyr_1590	0.23	-0.6
1,789,857	+		Psyr_1590	0.49	+0.5
1,789,857	+		Psyr_1590	0.49	+0.2
1,789,857	+				-0.1
1,789,857	+		Psyr_1590	0.49	-1.5
1,789,857	+		Psyr_1590	0.49	+0.9
1,789,857	+		Psyr_1590	0.49	+0.1
1,789,857	+		Psyr_1590	0.49	-2.7
1,789,857	+		Psyr_1590	0.49	-0.1
1,789,857	+		Psyr_1590	0.49	+2.5
1,789,857	+		Psyr_1590	0.49	-2.3
1,789,857	+		Psyr_1590	0.49	+0.4
1,789,857	+		Psyr_1590	0.49	+0.2
1,789,858	-		Psyr_1590	0.49	+0.6
1,789,858	-		Psyr_1590	0.49	-1.7
1,789,858	-		Psyr_1590	0.49	-2.1
1,789,858	-		Psyr_1590	0.49	-0.8
1,789,858	-		Psyr_1590	0.49	+1.0
1,789,858	-		Psyr_1590	0.49	+3.9
1,789,858	-		Psyr_1590	0.49	+0.6
1,789,858	-		Psyr_1590	0.49	-1.1
1,789,871	+		Psyr_1590	0.50	+0.7
1,789,871	+		Psyr_1590	0.50	+0.6
1,789,871	+		Psyr_1590	0.50	-0.1
1,789,872	-		Psyr_1590	0.50	-1.1
1,789,872	-		Psyr_1590	0.50	-0.4
1,789,872	-		Psyr_1590	0.50	-0.7
1,790,003	+		Psyr_1590	0.61	-0.6
1,790,004	-		Psyr_1590	0.62	-0.1
1,790,032	+		Psyr_1590	0.64	-1.1
1,790,033	-		Psyr_1590	0.64	+0.9
1,790,033	-		Psyr_1590	0.64	-0.1
1,790,204	-		Psyr_1590	0.78	-0.1
1,790,222	+		Psyr_1590	0.80	-1.8
1,790,255	+		Psyr_1590	0.83	+0.4
1,790,320	+		Psyr_1590	0.88	-0.2
1,790,320	+		Psyr_1590	0.88	+0.1
1,790,356	-				-0.7
1,790,356	-				-0.7
1,790,455	+				-0.1
1,790,496	-				-0.4
1,790,542	+				+0.7
1,790,542	+				-0.3
1,790,580	+		Psyr_1591	0.16	+0.9
1,790,580	+		Psyr_1591	0.16	+1.0
1,790,584	+		Psyr_1591	0.17	-1.1
1,790,584	+		Psyr_1591	0.17	-0.6
1,790,585	-		Psyr_1591	0.17	-0.3
1,790,844	+		Psyr_1591	0.83	-0.1
1,790,844	+		Psyr_1591	0.83	-0.6
1,790,844	+		Psyr_1591	0.83	-0.1
1,790,844	+		Psyr_1591	0.83	-0.3
1,790,844	+		Psyr_1591	0.83	+1.1
1,790,844	+		Psyr_1591	0.83	+0.3
1,790,845	-		Psyr_1591	0.83	+2.4
1,790,845	-		Psyr_1591	0.83	+0.3
1,790,845	-		Psyr_1591	0.83	+1.3
1,790,845	-		Psyr_1591	0.83	+0.3
1,790,845	-		Psyr_1591	0.83	-0.0
1,790,845	-		Psyr_1591	0.83	+0.4
1,790,845	-		Psyr_1591	0.83	+0.8
1,790,907	+				+1.2
1,790,908	-				-0.1
1,790,908	-				+1.0
1,791,012	+		Psyr_1592	0.13	-1.4
1,791,012	+		Psyr_1592	0.13	+0.7
1,791,012	+		Psyr_1592	0.13	+0.4
1,791,012	+		Psyr_1592	0.13	-2.1
1,791,012	+		Psyr_1592	0.13	-2.5
1,791,012	+		Psyr_1592	0.13	+1.3
1,791,012	+		Psyr_1592	0.13	+0.3
1,791,012	+		Psyr_1592	0.13	+0.9
1,791,012	+		Psyr_1592	0.13	+0.2
1,791,012	+		Psyr_1592	0.13	+1.5
1,791,012	+		Psyr_1592	0.13	+0.2
1,791,012	+		Psyr_1592	0.13	+0.3
1,791,012	+		Psyr_1592	0.13	+1.4
1,791,012	+		Psyr_1592	0.13	+0.6
1,791,013	-		Psyr_1592	0.14	+0.4
1,791,013	-		Psyr_1592	0.14	+0.3
1,791,013	-		Psyr_1592	0.14	+1.4
1,791,013	-		Psyr_1592	0.14	-0.1
1,791,013	-		Psyr_1592	0.14	-0.1
1,791,013	-		Psyr_1592	0.14	+2.4
1,791,013	-		Psyr_1592	0.14	+3.2
1,791,013	-		Psyr_1592	0.14	-0.9
1,791,013	-		Psyr_1592	0.14	+0.4
1,791,013	-		Psyr_1592	0.14	+0.5
1,791,013	-		Psyr_1592	0.14	-0.1
1,791,013	-		Psyr_1592	0.14	-0.6
1,791,013	-		Psyr_1592	0.14	+0.5
1,791,013	-		Psyr_1592	0.14	+1.0
1,791,013	-		Psyr_1592	0.14	+1.3
1,791,013	-		Psyr_1592	0.14	-0.9
1,791,086	+		Psyr_1592	0.28	+0.4
1,791,086	+		Psyr_1592	0.28	+0.2
1,791,086	+		Psyr_1592	0.28	+0.7
1,791,086	+		Psyr_1592	0.28	-2.9
1,791,087	-		Psyr_1592	0.28	+0.5
1,791,087	-		Psyr_1592	0.28	-0.9
1,791,087	-		Psyr_1592	0.28	+1.1
1,791,087	-		Psyr_1592	0.28	+0.5
1,791,087	-		Psyr_1592	0.28	-0.7
1,791,087	-		Psyr_1592	0.28	+0.6
1,791,162	+		Psyr_1592	0.42	-0.4
1,791,162	+		Psyr_1592	0.42	+0.2
1,791,162	+		Psyr_1592	0.42	-0.9
1,791,163	-		Psyr_1592	0.43	-0.1
1,791,163	-		Psyr_1592	0.43	+1.4
1,791,357	+		Psyr_1592	0.80	+0.3
1,791,358	-		Psyr_1592	0.80	+0.4
1,791,461	-				-0.4
1,791,584	-				+0.4
1,791,589	+				+0.9
1,791,590	-				-0.4
1,791,619	+				-0.4
1,791,619	+				+2.2
1,791,619	+				+1.7
1,791,624	-				+0.4
1,791,624	-				-1.5
1,791,624	-				+0.3
1,791,631	+				-1.1
1,791,631	+				-0.5
1,791,631	+				+2.7
1,791,632	-				-0.1
1,791,632	-				+0.2
1,791,639	+				-0.7
1,791,639	+				+0.3
1,791,639	+				+0.6
1,791,639	+				-0.4
1,791,639	+				+1.4
1,791,639	+				+3.3
1,791,640	-				-1.1
1,791,640	-				-0.1
1,791,640	-				-0.6
1,791,640	-				+2.0
1,791,640	-				-2.7
1,791,640	-				-0.4
1,791,640	-				-1.7
1,791,640	-				+0.9
1,791,807	+				-1.1
1,791,878	+		Psyr_1593	0.12	-0.6
1,791,878	+		Psyr_1593	0.12	-0.5
1,791,878	+		Psyr_1593	0.12	-0.1
1,791,879	-		Psyr_1593	0.12	+2.2
1,791,879	-		Psyr_1593	0.12	+0.2
1,791,879	-		Psyr_1593	0.12	-0.6
1,791,879	-		Psyr_1593	0.12	-1.7
1,791,882	+		Psyr_1593	0.12	-1.7
1,791,882	+		Psyr_1593	0.12	+0.2
1,791,882	+		Psyr_1593	0.12	-1.4
1,791,882	+		Psyr_1593	0.12	+0.3
1,791,882	+		Psyr_1593	0.12	-2.1
1,791,882	+		Psyr_1593	0.12	+0.3
1,791,882	+		Psyr_1593	0.12	-1.7
1,791,883	-		Psyr_1593	0.12	-0.1
1,791,883	-		Psyr_1593	0.12	-2.1
1,791,883	-		Psyr_1593	0.12	+0.0
1,791,883	-		Psyr_1593	0.12	-0.5
1,791,883	-		Psyr_1593	0.12	+0.4
1,791,883	-		Psyr_1593	0.12	-0.1