Experiment: Varel_Bryant medium with Irgasan 0.0025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0664 and BT0665 are separated by 8 nucleotides BT0665 and BT0666 overlap by 1 nucleotides
BT0664: BT0664 - hypothetical protein (NCBI ptt file), at 818,740 to 819,888
BT0664
BT0665: BT0665 - hypothetical protein (NCBI ptt file), at 819,897 to 820,535
BT0665
BT0666: BT0666 - hypothetical protein (NCBI ptt file), at 820,535 to 821,680
BT0666
Position (kb) 819
820
821 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 818.937 kb on - strand, within BT0664 at 819.061 kb on - strand, within BT0664 at 819.259 kb on - strand, within BT0664 at 819.309 kb on - strand, within BT0664 at 819.350 kb on - strand, within BT0664 at 819.429 kb on - strand, within BT0664 at 819.437 kb on - strand, within BT0664 at 819.474 kb on - strand, within BT0664 at 819.523 kb on - strand, within BT0664 at 819.545 kb on + strand, within BT0664 at 819.622 kb on + strand, within BT0664 at 819.689 kb on - strand, within BT0664 at 819.713 kb on - strand, within BT0664 at 819.742 kb on + strand, within BT0664 at 819.743 kb on - strand, within BT0664 at 819.743 kb on - strand, within BT0664 at 819.855 kb on + strand at 819.981 kb on - strand, within BT0665 at 820.034 kb on - strand, within BT0665 at 820.102 kb on - strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.206 kb on - strand, within BT0665 at 820.349 kb on - strand, within BT0665 at 820.355 kb on - strand, within BT0665 at 820.404 kb on - strand, within BT0665 at 820.419 kb on - strand, within BT0665 at 820.584 kb on + strand at 820.589 kb on - strand at 820.645 kb on + strand at 820.657 kb on - strand, within BT0666 at 820.670 kb on + strand, within BT0666 at 820.758 kb on - strand, within BT0666 at 820.789 kb on - strand, within BT0666 at 820.790 kb on - strand, within BT0666 at 820.790 kb on - strand, within BT0666 at 820.794 kb on - strand, within BT0666 at 820.853 kb on + strand, within BT0666 at 820.854 kb on - strand, within BT0666 at 820.864 kb on - strand, within BT0666 at 820.964 kb on - strand, within BT0666 at 821.018 kb on - strand, within BT0666 at 821.023 kb on + strand, within BT0666 at 821.194 kb on + strand, within BT0666 at 821.203 kb on - strand, within BT0666 at 821.203 kb on - strand, within BT0666 at 821.227 kb on - strand, within BT0666 at 821.229 kb on - strand, within BT0666 at 821.235 kb on - strand, within BT0666 at 821.267 kb on + strand, within BT0666 at 821.332 kb on + strand, within BT0666 at 821.524 kb on + strand, within BT0666 at 821.525 kb on - strand, within BT0666
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Irgasan 0.0025 mM remove 818,937 - BT0664 0.17 +0.4 819,061 - BT0664 0.28 +1.0 819,259 - BT0664 0.45 -0.2 819,309 - BT0664 0.50 -1.2 819,350 - BT0664 0.53 -3.0 819,429 - BT0664 0.60 -1.8 819,437 - BT0664 0.61 -0.6 819,474 - BT0664 0.64 +0.0 819,523 - BT0664 0.68 -1.3 819,545 + BT0664 0.70 +1.0 819,622 + BT0664 0.77 -1.3 819,689 - BT0664 0.83 +1.0 819,713 - BT0664 0.85 +1.0 819,742 + BT0664 0.87 -1.8 819,743 - BT0664 0.87 -1.6 819,743 - BT0664 0.87 +0.0 819,855 + +0.0 819,981 - BT0665 0.13 +0.4 820,034 - BT0665 0.21 +1.0 820,102 - BT0665 0.32 +0.0 820,123 + BT0665 0.35 +0.6 820,123 + BT0665 0.35 +0.8 820,123 + BT0665 0.35 +0.0 820,206 - BT0665 0.48 +0.4 820,349 - BT0665 0.71 +0.0 820,355 - BT0665 0.72 -0.6 820,404 - BT0665 0.79 +0.0 820,419 - BT0665 0.82 +2.0 820,584 + -0.6 820,589 - -1.1 820,645 + -1.0 820,657 - BT0666 0.11 +1.0 820,670 + BT0666 0.12 +0.0 820,758 - BT0666 0.19 +0.4 820,789 - BT0666 0.22 -0.1 820,790 - BT0666 0.22 -0.4 820,790 - BT0666 0.22 +0.0 820,794 - BT0666 0.23 -1.0 820,853 + BT0666 0.28 -0.3 820,854 - BT0666 0.28 -1.3 820,864 - BT0666 0.29 -0.8 820,964 - BT0666 0.37 -0.9 821,018 - BT0666 0.42 -0.2 821,023 + BT0666 0.43 +1.0 821,194 + BT0666 0.58 -0.1 821,203 - BT0666 0.58 +0.0 821,203 - BT0666 0.58 +1.0 821,227 - BT0666 0.60 -0.8 821,229 - BT0666 0.61 +1.4 821,235 - BT0666 0.61 -0.4 821,267 + BT0666 0.64 +0.3 821,332 + BT0666 0.70 +1.0 821,524 + BT0666 0.86 +1.0 821,525 - BT0666 0.86 +1.0
Or see this region's nucleotide sequence