Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0147

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSynpcc7942_0146 and Synpcc7942_0147 are separated by 303 nucleotidesSynpcc7942_0147 and Synpcc7942_0148 are separated by 154 nucleotides Synpcc7942_0146: Synpcc7942_0146 - hypothetical protein, at 147,160 to 147,855 _0146 Synpcc7942_0147: Synpcc7942_0147 - hypothetical protein, at 148,159 to 148,491 _0147 Synpcc7942_0148: Synpcc7942_0148 - hypothetical protein, at 148,646 to 150,190 _0148 Position (kb) 148 149Strain fitness (log2 ratio) -2 -1 0 1 2 3at 147.166 kb on + strandat 147.166 kb on + strandat 147.171 kb on + strandat 147.186 kb on - strandat 147.191 kb on - strandat 147.214 kb on + strandat 147.214 kb on + strandat 147.215 kb on - strandat 147.220 kb on + strandat 147.221 kb on + strandat 147.224 kb on - strandat 147.224 kb on - strandat 147.244 kb on + strand, within Synpcc7942_0146at 147.262 kb on + strand, within Synpcc7942_0146at 147.383 kb on + strand, within Synpcc7942_0146at 147.402 kb on - strand, within Synpcc7942_0146at 147.430 kb on + strand, within Synpcc7942_0146at 147.430 kb on + strand, within Synpcc7942_0146at 147.440 kb on + strand, within Synpcc7942_0146at 147.440 kb on + strand, within Synpcc7942_0146at 147.440 kb on + strand, within Synpcc7942_0146at 147.448 kb on - strand, within Synpcc7942_0146at 147.463 kb on + strand, within Synpcc7942_0146at 147.463 kb on + strand, within Synpcc7942_0146at 147.478 kb on + strand, within Synpcc7942_0146at 147.501 kb on + strand, within Synpcc7942_0146at 147.501 kb on + strand, within Synpcc7942_0146at 147.534 kb on + strand, within Synpcc7942_0146at 147.549 kb on - strand, within Synpcc7942_0146at 147.554 kb on + strand, within Synpcc7942_0146at 147.554 kb on + strand, within Synpcc7942_0146at 147.559 kb on - strand, within Synpcc7942_0146at 147.631 kb on + strand, within Synpcc7942_0146at 147.634 kb on + strandat 147.636 kb on + strand, within Synpcc7942_0146at 147.641 kb on + strand, within Synpcc7942_0146at 147.643 kb on - strand, within Synpcc7942_0146at 147.654 kb on + strand, within Synpcc7942_0146at 147.655 kb on + strand, within Synpcc7942_0146at 147.681 kb on + strand, within Synpcc7942_0146at 147.688 kb on + strand, within Synpcc7942_0146at 147.688 kb on + strand, within Synpcc7942_0146at 147.706 kb on - strand, within Synpcc7942_0146at 147.726 kb on + strand, within Synpcc7942_0146at 147.726 kb on + strand, within Synpcc7942_0146at 147.759 kb on + strand, within Synpcc7942_0146at 147.759 kb on + strand, within Synpcc7942_0146at 147.767 kb on - strand, within Synpcc7942_0146at 147.770 kb on + strand, within Synpcc7942_0146at 147.770 kb on + strand, within Synpcc7942_0146at 147.770 kb on + strand, within Synpcc7942_0146at 147.770 kb on + strand, within Synpcc7942_0146at 147.778 kb on + strand, within Synpcc7942_0146at 147.778 kb on - strand, within Synpcc7942_0146at 147.778 kb on - strand, within Synpcc7942_0146at 147.793 kb on + strandat 147.793 kb on + strandat 147.795 kb on - strandat 147.802 kb on - strandat 147.820 kb on + strandat 147.838 kb on + strandat 147.838 kb on + strandat 147.846 kb on - strandat 147.858 kb on - strandat 147.858 kb on - strandat 147.877 kb on - strandat 147.888 kb on + strandat 147.888 kb on + strandat 147.896 kb on - strandat 147.896 kb on - strandat 147.896 kb on - strandat 147.896 kb on - strandat 147.896 kb on - strandat 147.897 kb on - strandat 147.925 kb on - strandat 147.938 kb on + strandat 147.940 kb on + strandat 147.955 kb on + strandat 147.955 kb on + strandat 147.955 kb on + strandat 147.957 kb on + strandat 147.965 kb on - strandat 147.981 kb on - strandat 148.016 kb on - strandat 148.032 kb on + strandat 148.040 kb on - strandat 148.047 kb on + strandat 148.047 kb on + strandat 148.049 kb on + strandat 148.055 kb on - strandat 148.060 kb on + strandat 148.078 kb on - strandat 148.080 kb on + strandat 148.080 kb on + strandat 148.089 kb on + strandat 148.103 kb on + strandat 148.103 kb on + strandat 148.111 kb on - strandat 148.135 kb on + strandat 148.143 kb on - strandat 148.150 kb on + strandat 148.158 kb on - strandat 148.194 kb on + strand, within Synpcc7942_0147at 148.194 kb on + strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.201 kb on - strand, within Synpcc7942_0147at 148.251 kb on + strand, within Synpcc7942_0147at 148.251 kb on + strand, within Synpcc7942_0147at 148.251 kb on + strand, within Synpcc7942_0147at 148.251 kb on + strand, within Synpcc7942_0147at 148.251 kb on + strand, within Synpcc7942_0147at 148.251 kb on - strand, within Synpcc7942_0147at 148.253 kb on + strand, within Synpcc7942_0147at 148.259 kb on + strand, within Synpcc7942_0147at 148.259 kb on - strand, within Synpcc7942_0147at 148.259 kb on - strand, within Synpcc7942_0147at 148.259 kb on - strand, within Synpcc7942_0147at 148.261 kb on - strand, within Synpcc7942_0147at 148.261 kb on - strand, within Synpcc7942_0147at 148.261 kb on - strand, within Synpcc7942_0147at 148.287 kb on + strand, within Synpcc7942_0147at 148.287 kb on + strand, within Synpcc7942_0147at 148.287 kb on + strand, within Synpcc7942_0147at 148.287 kb on + strand, within Synpcc7942_0147at 148.292 kb on + strand, within Synpcc7942_0147at 148.295 kb on - strand, within Synpcc7942_0147at 148.295 kb on - strand, within Synpcc7942_0147at 148.304 kb on + strand, within Synpcc7942_0147at 148.312 kb on - strand, within Synpcc7942_0147at 148.312 kb on - strand, within Synpcc7942_0147at 148.317 kb on + strand, within Synpcc7942_0147at 148.317 kb on + strand, within Synpcc7942_0147at 148.376 kb on - strand, within Synpcc7942_0147at 148.381 kb on - strand, within Synpcc7942_0147at 148.393 kb on - strand, within Synpcc7942_0147at 148.394 kb on - strand, within Synpcc7942_0147at 148.408 kb on - strand, within Synpcc7942_0147at 148.415 kb on + strand, within Synpcc7942_0147at 148.427 kb on - strand, within Synpcc7942_0147at 148.439 kb on + strand, within Synpcc7942_0147at 148.466 kb on + strandat 148.505 kb on - strandat 148.519 kb on + strandat 148.522 kb on - strandat 148.522 kb on - strandat 148.524 kb on + strandat 148.532 kb on - strandat 148.569 kb on - strandat 148.570 kb on - strandat 148.592 kb on + strandat 148.596 kb on - strandat 148.607 kb on - strandat 148.625 kb on + strandat 148.636 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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147,166 + +1.7
147,166 + +1.2
147,171 + +0.2
147,186 - +1.7
147,191 - -0.4
147,214 + -2.3
147,214 + +2.1
147,215 - +1.0
147,220 + +1.6
147,221 + -1.2
147,224 - +1.2
147,224 - -0.8
147,244 + Synpcc7942_0146 0.12 -1.3
147,262 + Synpcc7942_0146 0.15 +1.9
147,383 + Synpcc7942_0146 0.32 -1.4
147,402 - Synpcc7942_0146 0.35 +1.6
147,430 + Synpcc7942_0146 0.39 +2.8
147,430 + Synpcc7942_0146 0.39 -0.5
147,440 + Synpcc7942_0146 0.40 -0.8
147,440 + Synpcc7942_0146 0.40 -0.1
147,440 + Synpcc7942_0146 0.40 +0.1
147,448 - Synpcc7942_0146 0.41 -0.1
147,463 + Synpcc7942_0146 0.44 +2.4
147,463 + Synpcc7942_0146 0.44 -2.1
147,478 + Synpcc7942_0146 0.46 +1.0
147,501 + Synpcc7942_0146 0.49 +0.7
147,501 + Synpcc7942_0146 0.49 -1.2
147,534 + Synpcc7942_0146 0.54 +0.2
147,549 - Synpcc7942_0146 0.56 -0.8
147,554 + Synpcc7942_0146 0.57 +1.0
147,554 + Synpcc7942_0146 0.57 -2.3
147,559 - Synpcc7942_0146 0.57 +0.2
147,631 + Synpcc7942_0146 0.68 +0.9
147,634 + +1.5
147,636 + Synpcc7942_0146 0.68 -0.3
147,641 + Synpcc7942_0146 0.69 +1.9
147,643 - Synpcc7942_0146 0.69 -1.8
147,654 + Synpcc7942_0146 0.71 +1.2
147,655 + Synpcc7942_0146 0.71 -0.3
147,681 + Synpcc7942_0146 0.75 -0.0
147,688 + Synpcc7942_0146 0.76 -2.6
147,688 + Synpcc7942_0146 0.76 +1.4
147,706 - Synpcc7942_0146 0.78 -0.4
147,726 + Synpcc7942_0146 0.81 +0.7
147,726 + Synpcc7942_0146 0.81 -0.7
147,759 + Synpcc7942_0146 0.86 +2.0
147,759 + Synpcc7942_0146 0.86 -0.9
147,767 - Synpcc7942_0146 0.87 +0.2
147,770 + Synpcc7942_0146 0.88 -2.1
147,770 + Synpcc7942_0146 0.88 +0.9
147,770 + Synpcc7942_0146 0.88 -0.8
147,770 + Synpcc7942_0146 0.88 -0.3
147,778 + Synpcc7942_0146 0.89 +1.6
147,778 - Synpcc7942_0146 0.89 -1.2
147,778 - Synpcc7942_0146 0.89 +0.0
147,793 + -0.7
147,793 + +0.6
147,795 - +2.9
147,802 - -2.4
147,820 + -2.5
147,838 + -0.7
147,838 + +1.3
147,846 - -1.0
147,858 - +1.8
147,858 - +1.5
147,877 - +0.0
147,888 + -0.0
147,888 + -0.4
147,896 - +1.7
147,896 - +1.3
147,896 - -1.4
147,896 - -0.4
147,896 - -2.2
147,897 - -0.3
147,925 - -0.5
147,938 + -0.5
147,940 + +1.9
147,955 + -0.1
147,955 + -0.1
147,955 + -1.6
147,957 + -0.7
147,965 - -1.3
147,981 - +1.9
148,016 - -1.3
148,032 + -0.4
148,040 - -1.1
148,047 + -2.1
148,047 + -0.7
148,049 + -0.3
148,055 - +1.0
148,060 + +0.3
148,078 - +0.1
148,080 + -1.2
148,080 + +1.9
148,089 + -1.9
148,103 + +2.5
148,103 + +0.1
148,111 - -0.3
148,135 + -1.5
148,143 - +0.0
148,150 + +0.1
148,158 - -1.5
148,194 + Synpcc7942_0147 0.11 -1.6
148,194 + Synpcc7942_0147 0.11 -0.8
148,201 - Synpcc7942_0147 0.13 -0.3
148,201 - Synpcc7942_0147 0.13 -0.3
148,201 - Synpcc7942_0147 0.13 -1.5
148,201 - Synpcc7942_0147 0.13 -1.6
148,201 - Synpcc7942_0147 0.13 +1.7
148,201 - Synpcc7942_0147 0.13 -1.3
148,251 + Synpcc7942_0147 0.28 -2.3
148,251 + Synpcc7942_0147 0.28 +1.8
148,251 + Synpcc7942_0147 0.28 +0.5
148,251 + Synpcc7942_0147 0.28 -1.0
148,251 + Synpcc7942_0147 0.28 +1.7
148,251 - Synpcc7942_0147 0.28 +0.6
148,253 + Synpcc7942_0147 0.28 -1.9
148,259 + Synpcc7942_0147 0.30 +0.2
148,259 - Synpcc7942_0147 0.30 -1.7
148,259 - Synpcc7942_0147 0.30 -1.2
148,259 - Synpcc7942_0147 0.30 +1.5
148,261 - Synpcc7942_0147 0.31 -0.6
148,261 - Synpcc7942_0147 0.31 +0.0
148,261 - Synpcc7942_0147 0.31 -1.1
148,287 + Synpcc7942_0147 0.38 +1.7
148,287 + Synpcc7942_0147 0.38 -0.1
148,287 + Synpcc7942_0147 0.38 -1.5
148,287 + Synpcc7942_0147 0.38 -0.3
148,292 + Synpcc7942_0147 0.40 -1.7
148,295 - Synpcc7942_0147 0.41 -0.2
148,295 - Synpcc7942_0147 0.41 -1.3
148,304 + Synpcc7942_0147 0.44 +0.2
148,312 - Synpcc7942_0147 0.46 +0.2
148,312 - Synpcc7942_0147 0.46 -0.1
148,317 + Synpcc7942_0147 0.47 +0.2
148,317 + Synpcc7942_0147 0.47 -0.1
148,376 - Synpcc7942_0147 0.65 -1.3
148,381 - Synpcc7942_0147 0.67 -0.8
148,393 - Synpcc7942_0147 0.70 +0.2
148,394 - Synpcc7942_0147 0.71 +0.3
148,408 - Synpcc7942_0147 0.75 -0.1
148,415 + Synpcc7942_0147 0.77 +0.2
148,427 - Synpcc7942_0147 0.80 +2.1
148,439 + Synpcc7942_0147 0.84 -2.2
148,466 + +1.4
148,505 - -1.1
148,519 + -1.2
148,522 - -0.9
148,522 - -0.8
148,524 + +1.4
148,532 - +1.5
148,569 - -0.7
148,570 - +2.6
148,592 + +0.7
148,596 - +1.8
148,607 - -1.3
148,625 + -1.8
148,636 + +1.3

Or see this region's nucleotide sequence