Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5023

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
5,962,854	-				+2.0
5,962,854	-				+1.4
5,962,854	-				+0.4
5,962,854	-				+0.4
5,962,854	-				+1.6
5,962,854	-				-1.6
5,962,854	-				-0.6
5,962,854	-				+0.3
5,962,907	+				-1.3
5,962,948	-				+0.9
5,962,959	+				-0.4
5,962,959	+				-0.1
5,962,960	-				+0.0
5,962,960	-				+3.2
5,962,973	-				+0.4
5,963,038	-				-0.4
5,963,116	+				+0.4
5,963,116	+				+0.9
5,963,117	-				+0.9
5,963,120	+				-1.1
5,963,120	+				-2.2
5,963,121	-				+3.0
5,963,121	-				-0.9
5,963,121	-				+0.2
5,963,121	-				+1.0
5,963,355	-		Psyr_5021	0.78	+2.8
5,963,451	+				-2.6
5,963,451	+				+0.1
5,963,517	+				-1.1
5,963,517	+				-0.9
5,963,531	+				-1.0
5,963,531	+				+0.2
5,963,531	+				-4.0
5,963,531	+				-0.1
5,963,531	+				-0.1
5,963,531	+				+0.2
5,963,531	+				+0.8
5,963,531	+				+1.3
5,963,531	+				+0.3
5,963,531	+				-0.6
5,963,531	+				+1.3
5,963,531	+				-0.5
5,963,531	+				-0.7
5,963,531	+				+2.0
5,963,532	-				+0.1
5,963,532	-				+1.4
5,963,532	-				+0.3
5,963,532	-				-0.1
5,963,532	-				-1.6
5,963,532	-				+0.2
5,963,532	-				-1.4
5,963,532	-				+0.7
5,963,532	-				-0.7
5,963,532	-				-0.8
5,963,558	+		Psyr_5022	0.16	+0.5
5,963,558	+		Psyr_5022	0.16	-0.5
5,963,558	+		Psyr_5022	0.16	-0.1
5,963,558	+		Psyr_5022	0.16	-3.0
5,963,558	+		Psyr_5022	0.16	+0.1
5,963,558	+		Psyr_5022	0.16	-0.2
5,963,558	+		Psyr_5022	0.16	+0.6
5,963,559	-		Psyr_5022	0.16	-0.0
5,963,559	-		Psyr_5022	0.16	+0.4
5,963,559	-		Psyr_5022	0.16	-0.6
5,963,559	-		Psyr_5022	0.16	-0.6
5,963,559	-		Psyr_5022	0.16	-2.3
5,963,559	-		Psyr_5022	0.16	-0.6
5,963,559	-		Psyr_5022	0.16	+0.7
5,963,559	-		Psyr_5022	0.16	-0.1
5,963,559	-		Psyr_5022	0.16	-0.8
5,963,559	-		Psyr_5022	0.16	-1.0
5,963,851	+				-0.8
5,963,851	+				+0.4
5,963,851	+				-1.5
5,963,851	+				+1.0
5,963,851	+				+0.1
5,963,851	+				+0.1
5,963,851	+				-0.5
5,963,851	+				-0.6
5,963,852	-				-0.6
5,963,852	-				-0.2
5,963,852	-				+0.0
5,963,852	-				-1.9
5,963,852	-				-0.0
5,963,852	-				+0.7
5,963,860	-				-0.6
5,964,046	+		Psyr_5023	0.60	+0.9
5,964,046	+		Psyr_5023	0.60	+0.4
5,964,046	+		Psyr_5023	0.60	-0.1
5,964,046	+		Psyr_5023	0.60	+1.3
5,964,046	+		Psyr_5023	0.60	+0.2
5,964,046	+		Psyr_5023	0.60	-0.9
5,964,046	+		Psyr_5023	0.60	+0.4
5,964,047	-		Psyr_5023	0.60	+0.5
5,964,047	-		Psyr_5023	0.60	+0.7
5,964,047	-		Psyr_5023	0.60	+1.0
5,964,047	-		Psyr_5023	0.60	+0.3
5,964,047	-		Psyr_5023	0.60	+0.9
5,964,047	-		Psyr_5023	0.60	+2.6
5,964,429	+		Psyr_5024	0.13	+0.7
5,964,429	+		Psyr_5024	0.13	-0.9
5,964,429	+		Psyr_5024	0.13	-1.0
5,964,430	-		Psyr_5024	0.13	+0.5
5,964,430	-		Psyr_5024	0.13	-1.4
5,964,556	-		Psyr_5024	0.20	-3.1
5,964,729	+		Psyr_5024	0.28	-0.9
5,964,729	+		Psyr_5024	0.28	-0.6
5,964,729	+		Psyr_5024	0.28	-0.5
5,964,729	+		Psyr_5024	0.28	-0.6
5,964,729	+		Psyr_5024	0.28	-0.4
5,964,729	+		Psyr_5024	0.28	+1.1
5,964,729	+		Psyr_5024	0.28	+0.3
5,964,729	+		Psyr_5024	0.28	+0.1
5,964,729	+		Psyr_5024	0.28	+0.9
5,964,729	+		Psyr_5024	0.28	-1.3
5,964,730	-		Psyr_5024	0.28	+1.6
5,964,730	-		Psyr_5024	0.28	-0.1
5,964,730	-		Psyr_5024	0.28	+0.2
5,964,730	-		Psyr_5024	0.28	-0.4
5,964,730	-		Psyr_5024	0.28	+1.3
5,964,730	-		Psyr_5024	0.28	+1.4
5,964,730	-		Psyr_5024	0.28	+0.3
5,964,730	-		Psyr_5024	0.28	-0.4
5,964,730	-		Psyr_5024	0.28	-0.1
5,964,730	-		Psyr_5024	0.28	+1.0
5,964,730	-		Psyr_5024	0.28	+0.0
5,964,730	-		Psyr_5024	0.28	+1.4
5,964,730	-		Psyr_5024	0.28	+1.6
5,964,730	-		Psyr_5024	0.28	-0.9
5,964,730	-		Psyr_5024	0.28	+0.1
5,964,762	-		Psyr_5024	0.30	-2.1
5,964,762	-		Psyr_5024	0.30	+0.4
5,964,792	+		Psyr_5024	0.32	-1.9
5,964,792	+		Psyr_5024	0.32	-0.1
5,964,793	-		Psyr_5024	0.32	-2.1
5,964,793	-		Psyr_5024	0.32	-2.0
5,964,793	-		Psyr_5024	0.32	-1.1
5,964,793	-		Psyr_5024	0.32	+3.5
5,964,793	-		Psyr_5024	0.32	-0.7
5,964,793	-		Psyr_5024	0.32	+2.1
5,964,837	+		Psyr_5024	0.34	+0.4
5,964,837	+		Psyr_5024	0.34	+0.2
5,964,837	+		Psyr_5024	0.34	-0.3
5,964,837	+		Psyr_5024	0.34	+1.0
5,964,838	-		Psyr_5024	0.34	+0.8
5,964,838	-		Psyr_5024	0.34	+0.4
5,964,882	+		Psyr_5024	0.36	-2.6
5,964,882	+		Psyr_5024	0.36	+0.6
5,964,882	+		Psyr_5024	0.36	+1.4
5,964,882	+		Psyr_5024	0.36	+0.2
5,964,882	+		Psyr_5024	0.36	+0.2
5,964,882	+		Psyr_5024	0.36	+2.0
5,964,883	-		Psyr_5024	0.36	-0.8
5,964,883	-		Psyr_5024	0.36	+0.0
5,964,883	-		Psyr_5024	0.36	-1.6
5,964,883	-		Psyr_5024	0.36	+2.0
5,964,888	+		Psyr_5024	0.37	+0.1
5,964,888	+		Psyr_5024	0.37	-1.7
5,964,889	-		Psyr_5024	0.37	+0.3
5,964,889	-		Psyr_5024	0.37	-1.1
5,964,891	+		Psyr_5024	0.37	+1.6
5,964,891	+		Psyr_5024	0.37	-0.1
5,964,891	+		Psyr_5024	0.37	-0.3
5,964,891	+		Psyr_5024	0.37	-2.4
5,964,891	+		Psyr_5024	0.37	-2.0
5,964,892	-		Psyr_5024	0.37	+0.2
5,964,892	-		Psyr_5024	0.37	-2.4
5,964,892	-		Psyr_5024	0.37	+1.3
5,964,892	-		Psyr_5024	0.37	-1.6
5,964,892	-		Psyr_5024	0.37	-0.6
5,964,892	-		Psyr_5024	0.37	+1.2
5,964,892	-		Psyr_5024	0.37	-1.6
5,964,892	-		Psyr_5024	0.37	+0.6
5,964,892	-		Psyr_5024	0.37	-0.0
5,964,892	-		Psyr_5024	0.37	-0.9
5,964,892	-		Psyr_5024	0.37	-1.4
5,965,014	+		Psyr_5024	0.43	+1.6
5,965,015	-		Psyr_5024	0.43	+0.9
5,965,026	+		Psyr_5024	0.44	+0.2
5,965,026	+		Psyr_5024	0.44	+0.9
5,965,026	+		Psyr_5024	0.44	+1.4
5,965,026	+		Psyr_5024	0.44	+0.1
5,965,027	-		Psyr_5024	0.44	+0.1
5,965,027	-		Psyr_5024	0.44	+0.7
5,965,027	-		Psyr_5024	0.44	-0.0