Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4217

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
5,021,550	+				-0.5
5,021,550	+				-1.9
5,021,560	+				-1.1
5,021,561	-				+0.1
5,021,562	+				+0.3
5,021,563	-				-0.1
5,021,616	-				+1.7
5,021,622	+				-0.9
5,021,622	+				-0.0
5,021,622	+				+1.1
5,021,622	+				+0.7
5,021,622	+				+3.1
5,021,622	+				+0.5
5,021,622	+				-0.5
5,021,622	+				-1.9
5,021,622	+				-0.9
5,021,622	+				+1.2
5,021,623	-				-0.6
5,021,623	-				+0.1
5,021,623	-				+0.1
5,021,623	-				+0.1
5,021,623	-				+0.1
5,021,623	-				-1.2
5,021,624	+				+0.1
5,021,624	+				+0.7
5,021,624	+				-0.9
5,021,624	+				+0.1
5,021,625	-				+1.1
5,021,625	-				+1.1
5,021,625	-				-0.1
5,021,625	-				-0.9
5,021,625	-				-0.9
5,021,625	-				+0.5
5,021,627	+				+0.3
5,021,635	+				+2.5
5,021,635	+				-0.5
5,021,635	+				+0.8
5,021,636	-				-0.9
5,021,636	-				+1.1
5,021,636	-				+1.5
5,021,673	-				+0.6
5,021,673	-				-1.0
5,021,673	-				-0.9
5,021,673	-				+0.1
5,021,714	+				+1.1
5,021,714	+				-0.2
5,021,714	+				-2.3
5,021,715	-				-1.0
5,021,715	-				+0.6
5,021,781	+		Psyr_4216	0.15	+0.7
5,021,781	+		Psyr_4216	0.15	+0.8
5,021,781	+		Psyr_4216	0.15	+0.5
5,021,781	+		Psyr_4216	0.15	+2.6
5,021,782	-		Psyr_4216	0.15	-0.0
5,021,787	+		Psyr_4216	0.16	+1.1
5,021,788	-		Psyr_4216	0.16	-0.6
5,021,852	+		Psyr_4216	0.24	+1.7
5,021,852	+		Psyr_4216	0.24	-1.9
5,021,852	+		Psyr_4216	0.24	-0.1
5,021,852	+		Psyr_4216	0.24	+0.5
5,021,852	+		Psyr_4216	0.24	+0.9
5,021,852	+		Psyr_4216	0.24	-2.4
5,021,853	-		Psyr_4216	0.24	+0.1
5,021,853	-		Psyr_4216	0.24	+0.5
5,021,892	+		Psyr_4216	0.29	-1.1
5,021,893	-		Psyr_4216	0.30	+2.5
5,021,895	+		Psyr_4216	0.30	-1.9
5,021,895	+		Psyr_4216	0.30	+1.1
5,021,895	+		Psyr_4216	0.30	+1.1
5,021,895	+		Psyr_4216	0.30	+1.0
5,021,896	-		Psyr_4216	0.30	+0.1
5,021,947	+		Psyr_4216	0.37	-1.0
5,021,955	+		Psyr_4216	0.38	+0.6
5,021,955	+		Psyr_4216	0.38	+0.2
5,021,956	-		Psyr_4216	0.38	-0.6
5,021,956	-		Psyr_4216	0.38	-1.0
5,021,956	-		Psyr_4216	0.38	-0.3
5,022,217	+		Psyr_4216	0.72	+1.5
5,022,329	+		Psyr_4216	0.87	+0.1
5,022,462	+				-2.2
5,022,463	-				+1.5
5,022,464	+				+0.5
5,022,464	+				+0.1
5,022,464	+				+0.3
5,022,465	-				-0.9
5,022,468	+				-0.2
5,022,468	+				+1.4
5,022,468	+				-1.6
5,022,468	+				-0.2
5,022,468	+				+3.3
5,022,468	+				+0.7
5,022,468	+				+0.5
5,022,468	+				+0.3
5,022,468	+				-0.1
5,022,468	+				+0.1
5,022,468	+				+1.5
5,022,468	+				+3.5
5,022,468	+				-1.7
5,022,469	-				-0.1
5,022,469	-				-0.2
5,022,469	-				+1.0
5,022,469	-				-0.1
5,022,469	-				+0.1
5,022,469	-				+1.7
5,022,469	-				-0.9
5,022,469	-				-0.1
5,022,469	-				-0.5
5,022,507	-				+0.2
5,022,535	+				+1.3
5,022,535	+				-0.9
5,022,535	+				-0.6
5,022,535	+				-0.3
5,022,535	+				+0.6
5,022,536	-				-2.5
5,022,536	-				+0.4
5,022,536	-				+2.0
5,022,536	-				-1.6
5,022,536	-				-1.9
5,022,652	+		Psyr_4217	0.14	+0.9
5,022,652	+		Psyr_4217	0.14	-1.1
5,022,652	+		Psyr_4217	0.14	+0.1
5,022,653	-		Psyr_4217	0.14	+0.9
5,022,653	-		Psyr_4217	0.14	-2.2
5,022,653	-		Psyr_4217	0.14	-1.2
5,022,653	-		Psyr_4217	0.14	+0.1
5,022,662	+		Psyr_4217	0.15	+0.5
5,022,662	+		Psyr_4217	0.15	+0.5
5,022,663	-		Psyr_4217	0.15	+0.5
5,022,663	-		Psyr_4217	0.15	+0.3
5,022,713	+		Psyr_4217	0.20	-1.0
5,022,823	+		Psyr_4217	0.32	+0.1
5,022,824	-		Psyr_4217	0.32	+2.1
5,022,836	+		Psyr_4217	0.33	-0.0
5,022,836	+		Psyr_4217	0.33	-0.5
5,022,836	+		Psyr_4217	0.33	-2.7
5,022,836	+		Psyr_4217	0.33	+0.4
5,022,836	+		Psyr_4217	0.33	+0.9
5,022,837	-		Psyr_4217	0.34	-0.3
5,022,837	-		Psyr_4217	0.34	-1.9
5,022,837	-		Psyr_4217	0.34	+0.1
5,022,837	-		Psyr_4217	0.34	+0.1
5,023,073	+		Psyr_4217	0.59	+1.5
5,023,073	+		Psyr_4217	0.59	+1.1
5,023,073	+		Psyr_4217	0.59	+0.9
5,023,073	+		Psyr_4217	0.59	+0.3
5,023,073	+		Psyr_4217	0.59	+0.8
5,023,073	+		Psyr_4217	0.59	-0.5
5,023,074	-		Psyr_4217	0.59	+0.7
5,023,116	+		Psyr_4217	0.64	+0.5
5,023,116	+		Psyr_4217	0.64	+2.7
5,023,116	+		Psyr_4217	0.64	+0.8
5,023,116	+		Psyr_4217	0.64	+1.0
5,023,117	-		Psyr_4217	0.64	+0.8
5,023,117	-		Psyr_4217	0.64	+0.5
5,023,123	+		Psyr_4217	0.65	-0.6
5,023,123	+		Psyr_4217	0.65	+0.5
5,023,124	-		Psyr_4217	0.65	-2.2
5,023,157	+		Psyr_4217	0.68	+0.6
5,023,158	-		Psyr_4217	0.68	-1.5
5,023,271	+		Psyr_4217	0.81	+0.9
5,023,271	+		Psyr_4217	0.81	+0.4
5,023,271	+		Psyr_4217	0.81	+0.3
5,023,272	-		Psyr_4217	0.81	-0.2
5,023,272	-		Psyr_4217	0.81	-1.0
5,023,272	-		Psyr_4217	0.81	+0.1
5,023,305	-		Psyr_4217	0.84	-1.1
5,023,357	+		Psyr_4217	0.90	+0.6
5,023,357	+		Psyr_4217	0.90	+0.3
5,023,357	+		Psyr_4217	0.90	-0.3
5,023,357	+		Psyr_4217	0.90	-1.3
5,023,358	-				+0.1
5,023,358	-				-1.2
5,023,358	-				+2.1
5,023,358	-				+0.1
5,023,358	-				-0.1
5,023,358	-				+0.7
5,023,358	-				+1.1
5,023,368	+				-1.2
5,023,368	+				-0.0
5,023,368	+				-0.9
5,023,368	+				-0.9
5,023,368	+				-0.1
5,023,368	+				+1.1
5,023,368	+				+0.9
5,023,369	-				+1.7
5,023,369	-				-0.6
5,023,387	+				-2.1
5,023,387	+				+0.8
5,023,388	-				+0.4
5,023,454	+				-0.7
5,023,455	-				-0.2
5,023,498	+				-2.7
5,023,501	+				+0.1
5,023,502	-				+2.1
5,023,534	+				+0.5
5,023,535	-				-0.2
5,023,600	+				+0.1
5,023,601	-				+0.5
5,023,601	-				+0.5
5,023,601	-				+1.1
5,023,601	-				-1.1
5,023,601	-				-0.5
5,023,612	+				-0.5
5,023,612	+				-1.5
5,023,612	+				-0.5
5,023,665	-				-1.0
5,023,678	+				-2.9
5,023,679	-				-0.9
5,023,679	-				-2.7
5,023,679	-				+0.1
5,023,679	-				+0.1
5,023,770	+				-0.2
5,023,770	+				+0.1
5,023,770	+				+1.7
5,023,770	+				+0.2
5,023,770	+				+2.5
5,023,770	+				+0.2
5,023,770	+				+1.6
5,023,771	-				-2.7
5,023,771	-				-0.3
5,023,771	-				+0.3
5,023,771	-				+0.5
5,023,771	-				+1.5
5,023,804	+				+1.5
5,023,804	+				+1.3
5,023,805	-				+0.7
5,023,805	-				+2.4
5,023,808	+				-0.7
5,023,808	+				+1.0
5,023,808	+				+1.5
5,023,808	+				-0.6
5,023,808	+				-0.9
5,023,808	+				+1.3
5,023,808	+				-1.3
5,023,809	-				+0.1
5,023,809	-				-1.5
5,023,809	-				-0.5
5,023,809	-				+2.3
5,023,809	-				+2.9
5,023,809	-				+0.3
5,023,844	+				+1.5
5,023,844	+				+2.5
5,023,844	+				+0.5
5,023,844	+				+0.3
5,023,844	+				+1.0
5,023,844	+				-0.5
5,023,844	+				+0.4
5,023,844	+				+0.1
5,023,844	+				+0.5
5,023,844	+				-1.9
5,023,844	+				-0.4
5,023,844	+				+0.5
5,023,844	+				-0.9
5,023,844	+				+0.2
5,023,845	-				-0.2
5,023,845	-				-0.3
5,023,845	-				-0.4
5,023,845	-				-0.5
5,023,845	-				-1.3
5,023,845	-				+0.1
5,023,845	-				-1.5
5,023,845	-				+0.1
5,023,845	-				-0.9
5,023,845	-				+0.8
5,023,845	-				-0.4
5,023,845	-				-1.9
5,023,845	-				+0.7
5,023,952	+		Psyr_4218	0.15	-0.9
5,023,953	-		Psyr_4218	0.15	-0.6
5,024,017	+		Psyr_4218	0.19	+1.6
5,024,089	+		Psyr_4218	0.23	+0.3
5,024,089	+		Psyr_4218	0.23	+0.8
5,024,090	-		Psyr_4218	0.23	-0.1
5,024,090	-		Psyr_4218	0.23	-0.5
5,024,090	-		Psyr_4218	0.23	+2.1
5,024,090	-		Psyr_4218	0.23	-0.4
5,024,090	-		Psyr_4218	0.23	-0.4
5,024,090	-		Psyr_4218	0.23	-0.9
5,024,090	-		Psyr_4218	0.23	+2.7
5,024,090	-		Psyr_4218	0.23	+1.1
5,024,189	-		Psyr_4218	0.29	+1.4
5,024,210	+				+0.1
5,024,266	+		Psyr_4218	0.34	+0.8
5,024,266	+		Psyr_4218	0.34	+1.0
5,024,266	+		Psyr_4218	0.34	-1.5
5,024,267	-		Psyr_4218	0.34	+0.7
5,024,267	-		Psyr_4218	0.34	+1.0
5,024,327	+		Psyr_4218	0.38	-0.2