Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3762

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
4,478,810	+				-0.1
4,478,811	-				-0.1
4,478,849	+				+2.7
4,478,858	-				-2.4
4,478,911	+				+0.1
4,478,912	-				+0.1
4,479,015	+				+2.5
4,479,016	-				+0.9
4,479,152	-		Psyr_3761	0.29	-1.5
4,479,155	+		Psyr_3761	0.30	-0.8
4,479,155	+		Psyr_3761	0.30	+2.3
4,479,155	+		Psyr_3761	0.30	-0.2
4,479,155	+		Psyr_3761	0.30	+0.9
4,479,155	+		Psyr_3761	0.30	-1.6
4,479,155	+		Psyr_3761	0.30	-0.7
4,479,155	+		Psyr_3761	0.30	-0.1
4,479,155	+		Psyr_3761	0.30	+0.5
4,479,155	+		Psyr_3761	0.30	+0.8
4,479,155	+		Psyr_3761	0.30	+1.4
4,479,156	-		Psyr_3761	0.30	+0.1
4,479,156	-		Psyr_3761	0.30	+0.4
4,479,156	-		Psyr_3761	0.30	+0.9
4,479,156	-		Psyr_3761	0.30	-0.8
4,479,156	-		Psyr_3761	0.30	+0.3
4,479,156	-		Psyr_3761	0.30	-0.1
4,479,156	-		Psyr_3761	0.30	+0.4
4,479,156	-		Psyr_3761	0.30	-0.4
4,479,156	-		Psyr_3761	0.30	-0.1
4,479,156	-		Psyr_3761	0.30	+1.2
4,479,218	-		Psyr_3761	0.40	-0.1
4,479,218	-		Psyr_3761	0.40	+0.2
4,479,305	+		Psyr_3761	0.55	-1.1
4,479,721	-				+0.4
4,479,773	+				+1.3
4,479,773	+				-0.2
4,479,941	+		Psyr_3762	0.14	+2.7
4,479,942	-		Psyr_3762	0.14	+0.4
4,480,097	+		Psyr_3762	0.27	+0.9
4,480,097	+		Psyr_3762	0.27	-0.8
4,480,097	+		Psyr_3762	0.27	-0.3
4,480,097	+		Psyr_3762	0.27	-1.1
4,480,098	-		Psyr_3762	0.27	-0.6
4,480,224	+		Psyr_3762	0.37	-0.7
4,480,224	+		Psyr_3762	0.37	-0.1
4,480,224	+		Psyr_3762	0.37	+0.5
4,480,225	-		Psyr_3762	0.37	-0.6
4,480,225	-		Psyr_3762	0.37	-0.4
4,480,225	-		Psyr_3762	0.37	+1.2
4,480,482	+		Psyr_3762	0.59	-0.1
4,480,482	+		Psyr_3762	0.59	+0.2
4,480,482	+		Psyr_3762	0.59	-0.4
4,480,482	+		Psyr_3762	0.59	-0.9
4,480,483	-		Psyr_3762	0.59	+0.3
4,480,483	-		Psyr_3762	0.59	+0.9
4,480,483	-		Psyr_3762	0.59	-0.4
4,480,483	-		Psyr_3762	0.59	+1.3
4,480,483	-		Psyr_3762	0.59	-0.5
4,480,483	-		Psyr_3762	0.59	+0.5
4,480,483	-		Psyr_3762	0.59	-0.1
4,480,484	+		Psyr_3762	0.59	+0.3
4,480,484	+		Psyr_3762	0.59	-0.6
4,480,484	+		Psyr_3762	0.59	-0.3
4,480,484	+		Psyr_3762	0.59	-0.4
4,480,484	+		Psyr_3762	0.59	+0.5
4,480,484	+		Psyr_3762	0.59	+1.4
4,480,484	+		Psyr_3762	0.59	-1.6
4,480,484	+		Psyr_3762	0.59	-0.4
4,480,484	+		Psyr_3762	0.59	-1.5
4,480,484	+		Psyr_3762	0.59	+0.5
4,480,484	+		Psyr_3762	0.59	+1.5
4,480,485	-		Psyr_3762	0.59	-0.6
4,480,485	-		Psyr_3762	0.59	-1.5
4,480,485	-		Psyr_3762	0.59	+0.9
4,480,485	-		Psyr_3762	0.59	-1.1
4,480,485	-		Psyr_3762	0.59	+0.1
4,480,485	-		Psyr_3762	0.59	+1.1
4,480,485	-		Psyr_3762	0.59	+0.9
4,480,485	-		Psyr_3762	0.59	+0.8
4,480,485	-		Psyr_3762	0.59	-2.4
4,480,485	-		Psyr_3762	0.59	-1.1
4,480,488	+		Psyr_3762	0.59	-0.1
4,480,488	+		Psyr_3762	0.59	+0.9
4,480,488	+		Psyr_3762	0.59	-1.6
4,480,488	+		Psyr_3762	0.59	-0.1
4,480,489	-		Psyr_3762	0.59	+0.5
4,480,489	-		Psyr_3762	0.59	+1.8
4,480,489	-		Psyr_3762	0.59	+1.9
4,480,489	-		Psyr_3762	0.59	-0.4
4,480,489	-		Psyr_3762	0.59	-0.5
4,480,489	-		Psyr_3762	0.59	+2.4
4,480,489	-		Psyr_3762	0.59	+4.3
4,480,489	-		Psyr_3762	0.59	+1.2
4,480,489	-		Psyr_3762	0.59	+1.2
4,480,489	-		Psyr_3762	0.59	+0.4
4,480,489	-		Psyr_3762	0.59	-0.5
4,480,599	+		Psyr_3762	0.69	+0.6
4,480,599	+		Psyr_3762	0.69	-1.2
4,480,599	+		Psyr_3762	0.69	-2.0
4,480,600	-		Psyr_3762	0.69	-1.5
4,480,896	+				+0.2
4,480,896	+				-0.4
4,480,896	+				-0.5
4,480,896	+				-0.9
4,480,896	+				-0.5
4,480,896	+				-0.7
4,480,897	-				+0.8
4,480,897	-				-0.5
4,480,897	-				-0.5
4,480,897	-				+1.9
4,480,897	-				+0.1
4,480,897	-				+0.4
4,480,975	-				-0.6
4,481,058	+				-0.5
4,481,059	-				-0.1
4,481,059	-				-0.7
4,481,061	+				-0.9
4,481,061	+				+0.9
4,481,061	+				-0.2
4,481,061	+				-1.0
4,481,062	-				-0.1
4,481,062	-				+1.7
4,481,062	-				-0.5
4,481,062	-				-0.5
4,481,062	-				-0.1
4,481,062	-				+0.3
4,481,062	-				+1.7
4,481,068	+				-1.9
4,481,068	+				-0.9
4,481,108	-				+2.5
4,481,116	+				+0.1
4,481,117	-				-1.2
4,481,148	+				+1.1
4,481,148	+				-0.2
4,481,148	+				+0.2
4,481,148	+				-0.9
4,481,149	-				-0.1
4,481,178	+				-0.6
4,481,179	-				+0.7
4,481,179	-				+0.1
4,481,179	-				+0.4
4,481,257	+				-0.7
4,481,257	+				+1.1
4,481,258	-				+0.5
4,481,258	-				+2.6
4,481,275	+				-1.1
4,481,275	+				+0.9
4,481,275	+				-2.1
4,481,275	+				-0.1
4,481,275	+				-0.6
4,481,276	-				+1.7
4,481,276	-				-2.4
4,481,285	+				-2.4
4,481,285	+				-0.7
4,481,286	-				+0.2
4,481,322	-				+1.3
4,481,378	+				+0.4
4,481,378	+				+0.4
4,481,378	+				+0.9
4,481,378	+				-0.4
4,481,378	+				+1.5
4,481,379	-				-2.9
4,481,379	-				+2.7
4,481,379	-				+0.5
4,481,379	-				-0.1
4,481,379	-				-1.1
4,481,379	-				-0.8
4,481,379	-				+1.4
4,481,379	-				-1.0
4,481,379	-				+0.8
4,481,381	+				+0.9
4,481,381	+				-0.2
4,481,381	+				-1.6
4,481,381	+				-0.4
4,481,424	-		Psyr_3763	0.14	-0.6
4,481,450	+		Psyr_3763	0.16	-1.9
4,481,596	+		Psyr_3763	0.30	-1.8
4,481,596	+		Psyr_3763	0.30	+0.7
4,481,597	-		Psyr_3763	0.30	-1.4
4,481,597	-		Psyr_3763	0.30	+0.1
4,481,597	-		Psyr_3763	0.30	+1.5
4,481,597	-		Psyr_3763	0.30	-0.3
4,481,720	+		Psyr_3763	0.41	+1.2
4,481,720	+		Psyr_3763	0.41	+2.9
4,481,720	+		Psyr_3763	0.41	+0.1
4,481,721	-		Psyr_3763	0.41	+0.7
4,481,721	-		Psyr_3763	0.41	+1.7
4,481,747	+		Psyr_3763	0.44	+0.7
4,481,747	+		Psyr_3763	0.44	+1.2
4,481,748	-		Psyr_3763	0.44	-2.6
4,481,748	-		Psyr_3763	0.44	+0.4
4,481,748	-		Psyr_3763	0.44	-1.1
4,481,748	-		Psyr_3763	0.44	-1.2
4,481,752	+		Psyr_3763	0.44	+0.0
4,481,752	+		Psyr_3763	0.44	-0.6
4,481,752	+		Psyr_3763	0.44	-0.2
4,481,753	-		Psyr_3763	0.44	+1.0
4,481,753	-		Psyr_3763	0.44	+1.6
4,481,891	+		Psyr_3763	0.57	+0.6
4,481,892	-		Psyr_3763	0.57	+1.6
4,481,912	+		Psyr_3763	0.59	+0.6
4,481,972	+		Psyr_3763	0.65	-0.4
4,481,972	+		Psyr_3763	0.65	+0.1
4,481,972	+		Psyr_3763	0.65	+1.0
4,481,973	-		Psyr_3763	0.65	-1.1
4,481,973	-		Psyr_3763	0.65	-1.5
4,481,973	-		Psyr_3763	0.65	+1.1
4,481,973	-		Psyr_3763	0.65	-0.1