Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26585 and BWI76_RS26590 are separated by 87 nucleotides BWI76_RS26590 and BWI76_RS26595 are separated by 231 nucleotides
BWI76_RS26585: BWI76_RS26585 - MFS transporter, at 5,503,083 to 5,504,555
_RS26585
BWI76_RS26590: BWI76_RS26590 - transcriptional regulator, at 5,504,643 to 5,505,146
_RS26590
BWI76_RS26595: BWI76_RS26595 - FAD-dependent oxidoreductase, at 5,505,378 to 5,506,577
_RS26595
Position (kb) 5504
5505
5506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5503.692 kb on - strand, within BWI76_RS26585 at 5503.759 kb on - strand, within BWI76_RS26585 at 5503.894 kb on + strand, within BWI76_RS26585 at 5503.902 kb on - strand, within BWI76_RS26585 at 5503.924 kb on + strand, within BWI76_RS26585 at 5503.930 kb on - strand, within BWI76_RS26585 at 5504.044 kb on + strand, within BWI76_RS26585 at 5504.076 kb on + strand, within BWI76_RS26585 at 5504.078 kb on + strand, within BWI76_RS26585 at 5504.099 kb on + strand, within BWI76_RS26585 at 5504.106 kb on + strand, within BWI76_RS26585 at 5504.234 kb on + strand, within BWI76_RS26585 at 5504.251 kb on - strand, within BWI76_RS26585 at 5504.320 kb on - strand, within BWI76_RS26585 at 5504.583 kb on - strand at 5504.670 kb on - strand at 5504.741 kb on + strand, within BWI76_RS26590 at 5504.915 kb on + strand, within BWI76_RS26590 at 5504.930 kb on - strand, within BWI76_RS26590 at 5505.143 kb on - strand at 5505.380 kb on - strand at 5505.429 kb on + strand at 5505.437 kb on - strand at 5505.483 kb on - strand at 5505.499 kb on - strand, within BWI76_RS26595 at 5505.504 kb on - strand, within BWI76_RS26595 at 5505.628 kb on + strand, within BWI76_RS26595 at 5505.628 kb on + strand, within BWI76_RS26595 at 5505.984 kb on + strand, within BWI76_RS26595 at 5506.066 kb on + strand, within BWI76_RS26595 at 5506.074 kb on - strand, within BWI76_RS26595
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 5,503,692 - BWI76_RS26585 0.41 -0.9 5,503,759 - BWI76_RS26585 0.46 +1.6 5,503,894 + BWI76_RS26585 0.55 -0.6 5,503,902 - BWI76_RS26585 0.56 +1.0 5,503,924 + BWI76_RS26585 0.57 -0.1 5,503,930 - BWI76_RS26585 0.58 +2.3 5,504,044 + BWI76_RS26585 0.65 -0.6 5,504,076 + BWI76_RS26585 0.67 +0.8 5,504,078 + BWI76_RS26585 0.68 +0.4 5,504,099 + BWI76_RS26585 0.69 -0.7 5,504,106 + BWI76_RS26585 0.69 +0.6 5,504,234 + BWI76_RS26585 0.78 +1.2 5,504,251 - BWI76_RS26585 0.79 -1.6 5,504,320 - BWI76_RS26585 0.84 +0.2 5,504,583 - -0.5 5,504,670 - +0.3 5,504,741 + BWI76_RS26590 0.19 +2.0 5,504,915 + BWI76_RS26590 0.54 +0.4 5,504,930 - BWI76_RS26590 0.57 +0.3 5,505,143 - -0.5 5,505,380 - -0.9 5,505,429 + -0.0 5,505,437 - -2.1 5,505,483 - -0.6 5,505,499 - BWI76_RS26595 0.10 -0.1 5,505,504 - BWI76_RS26595 0.10 +0.2 5,505,628 + BWI76_RS26595 0.21 +0.1 5,505,628 + BWI76_RS26595 0.21 -1.4 5,505,984 + BWI76_RS26595 0.51 +2.1 5,506,066 + BWI76_RS26595 0.57 -0.1 5,506,074 - BWI76_RS26595 0.58 +0.6
Or see this region's nucleotide sequence