Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23675
Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,940,566 | + | +0.9 | |||
4,940,566 | + | -0.2 | |||
4,940,571 | + | +0.0 | |||
4,940,576 | + | -1.0 | |||
4,940,579 | - | -1.2 | |||
4,940,623 | + | +0.9 | |||
4,941,022 | - | BWI76_RS23670 | 0.55 | +0.3 | |
4,941,207 | - | BWI76_RS23670 | 0.78 | -0.1 | |
4,941,266 | + | BWI76_RS23670 | 0.86 | -1.3 | |
4,941,297 | + | BWI76_RS23670 | 0.89 | -1.0 | |
4,941,343 | + | +1.7 | |||
4,941,644 | - | BWI76_RS23675 | 0.22 | +1.7 | |
4,941,832 | + | BWI76_RS23675 | 0.49 | -2.2 | |
4,941,851 | + | BWI76_RS23675 | 0.52 | +0.2 | |
4,941,860 | + | BWI76_RS23675 | 0.53 | -1.8 | |
4,941,870 | + | BWI76_RS23675 | 0.55 | -1.1 | |
4,941,878 | - | BWI76_RS23675 | 0.56 | +0.6 | |
4,941,973 | + | BWI76_RS23675 | 0.70 | -1.4 | |
4,942,073 | - | BWI76_RS23675 | 0.84 | +1.5 | |
4,942,074 | - | BWI76_RS23675 | 0.84 | +0.4 | |
4,942,123 | - | +0.6 | |||
4,942,162 | - | +0.4 | |||
4,942,239 | + | +1.1 | |||
4,942,428 | - | BWI76_RS23680 | 0.25 | +0.4 | |
4,942,663 | + | BWI76_RS23680 | 0.50 | +0.8 | |
4,942,717 | + | BWI76_RS23680 | 0.56 | +0.7 | |
4,942,927 | - | BWI76_RS23680 | 0.78 | +0.9 | |
4,942,927 | - | BWI76_RS23680 | 0.78 | +0.2 | |
4,942,996 | + | BWI76_RS23680 | 0.85 | -0.2 | |
4,943,142 | - | +1.1 | |||
4,943,159 | - | -0.8 |
Or see this region's nucleotide sequence