Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22365 and BWI76_RS22370 are separated by 258 nucleotides BWI76_RS22370 and BWI76_RS22375 are separated by 117 nucleotides
BWI76_RS22365: BWI76_RS22365 - hydrogenase expression/formation protein HypE, at 4,660,584 to 4,661,594
_RS22365
BWI76_RS22370: BWI76_RS22370 - transcriptional regulator FhlA, at 4,661,853 to 4,663,925
_RS22370
BWI76_RS22375: BWI76_RS22375 - pectin acetylesterase, at 4,664,043 to 4,664,990
_RS22375
Position (kb)
4661
4662
4663
4664 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4661.187 kb on + strand, within BWI76_RS22365 at 4661.235 kb on + strand, within BWI76_RS22365 at 4661.416 kb on - strand, within BWI76_RS22365 at 4661.524 kb on + strand at 4661.639 kb on + strand at 4661.653 kb on - strand at 4662.124 kb on - strand, within BWI76_RS22370 at 4662.147 kb on - strand, within BWI76_RS22370 at 4662.375 kb on - strand, within BWI76_RS22370 at 4662.433 kb on + strand, within BWI76_RS22370 at 4662.439 kb on - strand, within BWI76_RS22370 at 4662.523 kb on + strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.560 kb on + strand, within BWI76_RS22370 at 4662.693 kb on - strand, within BWI76_RS22370 at 4662.770 kb on - strand, within BWI76_RS22370 at 4662.783 kb on - strand, within BWI76_RS22370 at 4662.965 kb on + strand, within BWI76_RS22370 at 4663.034 kb on + strand, within BWI76_RS22370 at 4663.065 kb on + strand, within BWI76_RS22370 at 4663.065 kb on + strand, within BWI76_RS22370 at 4663.755 kb on - strand at 4664.374 kb on - strand, within BWI76_RS22375 at 4664.410 kb on + strand, within BWI76_RS22375 at 4664.418 kb on - strand, within BWI76_RS22375 at 4664.420 kb on + strand, within BWI76_RS22375 at 4664.641 kb on - strand, within BWI76_RS22375 at 4664.752 kb on - strand, within BWI76_RS22375 at 4664.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 4,661,187 + BWI76_RS22365 0.60 -1.1 4,661,235 + BWI76_RS22365 0.64 -0.5 4,661,416 - BWI76_RS22365 0.82 -0.5 4,661,524 + +1.1 4,661,639 + +0.3 4,661,653 - -0.1 4,662,124 - BWI76_RS22370 0.13 -0.2 4,662,147 - BWI76_RS22370 0.14 +0.6 4,662,375 - BWI76_RS22370 0.25 +0.5 4,662,433 + BWI76_RS22370 0.28 -0.6 4,662,439 - BWI76_RS22370 0.28 -0.0 4,662,523 + BWI76_RS22370 0.32 -1.0 4,662,531 - BWI76_RS22370 0.33 +1.1 4,662,531 - BWI76_RS22370 0.33 -1.6 4,662,560 + BWI76_RS22370 0.34 -0.2 4,662,693 - BWI76_RS22370 0.41 +4.5 4,662,770 - BWI76_RS22370 0.44 +0.6 4,662,783 - BWI76_RS22370 0.45 -1.9 4,662,965 + BWI76_RS22370 0.54 +0.3 4,663,034 + BWI76_RS22370 0.57 -0.9 4,663,065 + BWI76_RS22370 0.58 -0.6 4,663,065 + BWI76_RS22370 0.58 +0.4 4,663,755 - -1.1 4,664,374 - BWI76_RS22375 0.35 -0.4 4,664,410 + BWI76_RS22375 0.39 +1.4 4,664,418 - BWI76_RS22375 0.40 -0.1 4,664,420 + BWI76_RS22375 0.40 -0.2 4,664,641 - BWI76_RS22375 0.63 +1.1 4,664,752 - BWI76_RS22375 0.75 -0.2 4,664,921 - -0.5
Or see this region's nucleotide sequence