Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19430

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19425 and BWI76_RS19430 are separated by 141 nucleotidesBWI76_RS19430 and BWI76_RS19435 are separated by 14 nucleotides BWI76_RS19425: BWI76_RS19425 - methionine--tRNA ligase, at 4,051,535 to 4,053,568 _RS19425 BWI76_RS19430: BWI76_RS19430 - MolR family transcriptional regulator, at 4,053,710 to 4,057,426 _RS19430 BWI76_RS19435: BWI76_RS19435 - hypothetical protein, at 4,057,441 to 4,061,037 _RS19435 Position (kb) 4053 4054 4055 4056 4057 4058Strain fitness (log2 ratio) -1 0 1 2at 4053.983 kb on + strandat 4053.991 kb on - strandat 4054.021 kb on + strandat 4054.047 kb on - strandat 4054.276 kb on + strand, within BWI76_RS19430at 4054.415 kb on + strand, within BWI76_RS19430at 4054.425 kb on - strand, within BWI76_RS19430at 4054.434 kb on + strand, within BWI76_RS19430at 4054.442 kb on - strand, within BWI76_RS19430at 4054.693 kb on - strand, within BWI76_RS19430at 4055.225 kb on - strand, within BWI76_RS19430at 4055.312 kb on - strand, within BWI76_RS19430at 4055.359 kb on - strand, within BWI76_RS19430at 4055.519 kb on + strand, within BWI76_RS19430at 4055.807 kb on + strand, within BWI76_RS19430at 4055.815 kb on - strand, within BWI76_RS19430at 4056.156 kb on + strand, within BWI76_RS19430at 4056.207 kb on + strand, within BWI76_RS19430at 4057.179 kb on + strandat 4057.272 kb on + strandat 4057.372 kb on + strandat 4057.578 kb on - strandat 4057.760 kb on + strandat 4057.768 kb on - strandat 4057.788 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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4,053,983 + -0.3
4,053,991 - -0.2
4,054,021 + -0.8
4,054,047 - +0.7
4,054,276 + BWI76_RS19430 0.15 -0.3
4,054,415 + BWI76_RS19430 0.19 +0.1
4,054,425 - BWI76_RS19430 0.19 -0.6
4,054,434 + BWI76_RS19430 0.19 +2.4
4,054,442 - BWI76_RS19430 0.20 -0.9
4,054,693 - BWI76_RS19430 0.26 +0.9
4,055,225 - BWI76_RS19430 0.41 -1.0
4,055,312 - BWI76_RS19430 0.43 +0.5
4,055,359 - BWI76_RS19430 0.44 -1.0
4,055,519 + BWI76_RS19430 0.49 -0.7
4,055,807 + BWI76_RS19430 0.56 +0.1
4,055,815 - BWI76_RS19430 0.57 -0.3
4,056,156 + BWI76_RS19430 0.66 +1.2
4,056,207 + BWI76_RS19430 0.67 -1.3
4,057,179 + +1.7
4,057,272 + +0.1
4,057,372 + -0.5
4,057,578 - -1.1
4,057,760 + +1.6
4,057,768 - +0.7
4,057,788 + -0.5

Or see this region's nucleotide sequence