Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16780
Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,477,146 | + | BWI76_RS16775 | 0.80 | +0.8 | |
3,477,180 | - | BWI76_RS16775 | 0.83 | +0.6 | |
3,477,202 | + | BWI76_RS16775 | 0.85 | -0.1 | |
3,477,533 | + | -0.5 | |||
3,477,556 | - | +0.9 | |||
3,477,591 | + | -0.5 | |||
3,477,620 | + | +0.4 | |||
3,478,000 | - | BWI76_RS16780 | 0.18 | -0.4 | |
3,478,275 | + | BWI76_RS16780 | 0.31 | +1.0 | |
3,478,323 | + | BWI76_RS16780 | 0.33 | -1.0 | |
3,478,336 | - | BWI76_RS16780 | 0.34 | -0.1 | |
3,478,517 | - | BWI76_RS16780 | 0.42 | -0.2 | |
3,478,776 | + | BWI76_RS16780 | 0.55 | -0.7 | |
3,478,798 | - | BWI76_RS16780 | 0.56 | +0.3 | |
3,478,861 | + | BWI76_RS16780 | 0.58 | +1.1 | |
3,478,976 | - | BWI76_RS16780 | 0.64 | +0.0 | |
3,479,139 | + | BWI76_RS16780 | 0.71 | -0.4 | |
3,479,202 | + | BWI76_RS16780 | 0.74 | -1.4 | |
3,479,341 | - | BWI76_RS16780 | 0.81 | -1.6 | |
3,479,343 | - | BWI76_RS16780 | 0.81 | +0.1 | |
3,479,645 | - | -0.7 | |||
3,479,686 | - | +0.3 | |||
3,479,715 | - | -1.3 | |||
3,479,930 | + | -1.0 | |||
3,480,260 | + | BWI76_RS16785 | 0.31 | -1.6 | |
3,480,268 | - | BWI76_RS16785 | 0.32 | -1.9 | |
3,480,303 | - | BWI76_RS16785 | 0.35 | -0.0 | |
3,480,509 | - | BWI76_RS16785 | 0.52 | +0.8 | |
3,480,580 | + | BWI76_RS16785 | 0.59 | -0.8 |
Or see this region's nucleotide sequence