Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11755 and BWI76_RS11760 are separated by 97 nucleotides BWI76_RS11760 and BWI76_RS11765 are separated by 74 nucleotides BWI76_RS11765 and BWI76_RS11770 are separated by 134 nucleotides BWI76_RS11770 and BWI76_RS11775 are separated by 91 nucleotides
BWI76_RS11755: BWI76_RS11755 - catalase HPII, at 2,472,558 to 2,474,816
_RS11755
BWI76_RS11760: BWI76_RS11760 - cell division protein, at 2,474,914 to 2,475,252
_RS11760
BWI76_RS11765: BWI76_RS11765 - bifunctional transporter/kinase, at 2,475,327 to 2,476,718
_RS11765
BWI76_RS11770: BWI76_RS11770 - hypothetical protein, at 2,476,853 to 2,477,443
_RS11770
BWI76_RS11775: BWI76_RS11775 - 2-deoxy-D-gluconate 3-dehydrogenase, at 2,477,535 to 2,478,296
_RS11775
Position (kb)
2475
2476
2477 Strain fitness (log2 ratio)
-1
0
1
2 at 2474.794 kb on + strand at 2475.122 kb on - strand, within BWI76_RS11760 at 2475.325 kb on + strand at 2475.325 kb on + strand at 2475.455 kb on - strand at 2475.854 kb on + strand, within BWI76_RS11765 at 2476.002 kb on + strand, within BWI76_RS11765 at 2476.055 kb on - strand, within BWI76_RS11765 at 2476.239 kb on - strand, within BWI76_RS11765 at 2476.273 kb on + strand, within BWI76_RS11765 at 2476.338 kb on + strand, within BWI76_RS11765 at 2476.356 kb on - strand, within BWI76_RS11765 at 2476.395 kb on - strand, within BWI76_RS11765 at 2476.532 kb on + strand, within BWI76_RS11765 at 2476.638 kb on + strand at 2476.643 kb on - strand at 2476.937 kb on + strand, within BWI76_RS11770 at 2476.976 kb on - strand, within BWI76_RS11770 at 2477.275 kb on - strand, within BWI76_RS11770 at 2477.451 kb on + strand at 2477.575 kb on - strand at 2477.628 kb on - strand, within BWI76_RS11775
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 2,474,794 + -1.5 2,475,122 - BWI76_RS11760 0.61 -1.4 2,475,325 + -1.1 2,475,325 + +1.7 2,475,455 - +1.6 2,475,854 + BWI76_RS11765 0.38 +1.2 2,476,002 + BWI76_RS11765 0.48 +1.3 2,476,055 - BWI76_RS11765 0.52 +1.8 2,476,239 - BWI76_RS11765 0.66 +1.8 2,476,273 + BWI76_RS11765 0.68 +1.2 2,476,338 + BWI76_RS11765 0.73 +0.8 2,476,356 - BWI76_RS11765 0.74 +1.3 2,476,395 - BWI76_RS11765 0.77 +1.4 2,476,532 + BWI76_RS11765 0.87 +1.3 2,476,638 + +1.2 2,476,643 - +2.1 2,476,937 + BWI76_RS11770 0.14 -0.7 2,476,976 - BWI76_RS11770 0.21 -1.1 2,477,275 - BWI76_RS11770 0.71 -0.1 2,477,451 + +0.1 2,477,575 - -0.2 2,477,628 - BWI76_RS11775 0.12 -0.4
Or see this region's nucleotide sequence