Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04885

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04880 and BWI76_RS04885 are separated by 14 nucleotidesBWI76_RS04885 and BWI76_RS04890 are separated by 207 nucleotides BWI76_RS04880: BWI76_RS04880 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 1,020,006 to 1,022,669 _RS04880 BWI76_RS04885: BWI76_RS04885 - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 1,022,684 to 1,024,573 _RS04885 BWI76_RS04890: BWI76_RS04890 - dihydrolipoyl dehydrogenase, at 1,024,781 to 1,026,205 _RS04890 Position (kb) 1022 1023 1024 1025Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8at 1023.761 kb on + strand, within BWI76_RS04885

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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1,023,761 + BWI76_RS04885 0.57 +8.2

Or see this region's nucleotide sequence