Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02465

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02460 and BWI76_RS02465 are separated by 119 nucleotidesBWI76_RS02465 and BWI76_RS02470 are separated by 24 nucleotides BWI76_RS02460: BWI76_RS02460 - elongation factor P lysine(34) lysyltransferase, at 503,733 to 504,710 _RS02460 BWI76_RS02465: BWI76_RS02465 - miniconductance mechanosensitive channel MscM, at 504,830 to 508,156 _RS02465 BWI76_RS02470: BWI76_RS02470 - phosphatidylserine decarboxylase, at 508,181 to 509,143 _RS02470 Position (kb) 504 505 506 507 508 509Strain fitness (log2 ratio) -2 -1 0 1 2at 504.818 kb on - strandat 504.869 kb on + strandat 504.905 kb on + strandat 504.913 kb on - strandat 505.004 kb on - strandat 505.183 kb on - strand, within BWI76_RS02465at 505.285 kb on - strand, within BWI76_RS02465at 505.339 kb on + strand, within BWI76_RS02465at 505.870 kb on + strand, within BWI76_RS02465at 506.056 kb on - strand, within BWI76_RS02465at 506.356 kb on + strand, within BWI76_RS02465at 506.585 kb on + strand, within BWI76_RS02465at 506.586 kb on - strand, within BWI76_RS02465at 506.623 kb on + strand, within BWI76_RS02465at 506.870 kb on - strandat 506.985 kb on - strand, within BWI76_RS02465at 506.990 kb on - strand, within BWI76_RS02465at 507.016 kb on - strand, within BWI76_RS02465at 507.054 kb on + strand, within BWI76_RS02465at 507.119 kb on - strand, within BWI76_RS02465at 507.301 kb on + strand, within BWI76_RS02465at 507.374 kb on - strand, within BWI76_RS02465at 507.506 kb on - strand, within BWI76_RS02465at 507.567 kb on + strand, within BWI76_RS02465at 507.631 kb on + strand, within BWI76_RS02465at 507.653 kb on - strand, within BWI76_RS02465at 507.806 kb on - strand, within BWI76_RS02465at 507.852 kb on - strandat 507.856 kb on + strandat 507.864 kb on - strandat 507.993 kb on - strandat 508.023 kb on + strandat 508.031 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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504,818 - -1.0
504,869 + +1.6
504,905 + +0.2
504,913 - -0.7
505,004 - +2.6
505,183 - BWI76_RS02465 0.11 -0.7
505,285 - BWI76_RS02465 0.14 -1.1
505,339 + BWI76_RS02465 0.15 -2.0
505,870 + BWI76_RS02465 0.31 -1.5
506,056 - BWI76_RS02465 0.37 -0.7
506,356 + BWI76_RS02465 0.46 -1.7
506,585 + BWI76_RS02465 0.53 -0.5
506,586 - BWI76_RS02465 0.53 -0.6
506,623 + BWI76_RS02465 0.54 -0.7
506,870 - +1.0
506,985 - BWI76_RS02465 0.65 -0.7
506,990 - BWI76_RS02465 0.65 -0.5
507,016 - BWI76_RS02465 0.66 -0.1
507,054 + BWI76_RS02465 0.67 -0.8
507,119 - BWI76_RS02465 0.69 -0.6
507,301 + BWI76_RS02465 0.74 -1.5
507,374 - BWI76_RS02465 0.76 -0.7
507,506 - BWI76_RS02465 0.80 +1.6
507,567 + BWI76_RS02465 0.82 +0.6
507,631 + BWI76_RS02465 0.84 -0.7
507,653 - BWI76_RS02465 0.85 +0.6
507,806 - BWI76_RS02465 0.89 -1.2
507,852 - +0.7
507,856 + -0.7
507,864 - -2.0
507,993 - +0.8
508,023 + -1.5
508,031 - -0.1

Or see this region's nucleotide sequence