Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00465 and BWI76_RS00470 are separated by 48 nucleotides BWI76_RS00470 and BWI76_RS00475 are separated by 156 nucleotides
BWI76_RS00465: BWI76_RS00465 - formate dehydrogenase-N subunit alpha, at 94,761 to 97,175
_RS00465
BWI76_RS00470: BWI76_RS00470 - sulfate ABC transporter substrate-binding protein, at 97,224 to 97,811
_RS00470
BWI76_RS00475: BWI76_RS00475 - sulfurtransferase FdhD, at 97,968 to 98,804
_RS00475
Position (kb) 97
98 Strain fitness (log2 ratio) -1
0
1
2
3 at 96.456 kb on - strand, within BWI76_RS00465 at 96.574 kb on + strand, within BWI76_RS00465 at 96.574 kb on + strand, within BWI76_RS00465 at 96.582 kb on - strand, within BWI76_RS00465 at 96.582 kb on - strand, within BWI76_RS00465 at 96.582 kb on - strand, within BWI76_RS00465 at 96.604 kb on + strand, within BWI76_RS00465 at 96.813 kb on - strand, within BWI76_RS00465 at 96.861 kb on + strand, within BWI76_RS00465 at 97.211 kb on + strand at 97.222 kb on + strand at 97.349 kb on + strand, within BWI76_RS00470 at 97.406 kb on + strand, within BWI76_RS00470 at 97.492 kb on - strand, within BWI76_RS00470 at 97.529 kb on + strand, within BWI76_RS00470 at 97.529 kb on + strand, within BWI76_RS00470 at 97.529 kb on + strand, within BWI76_RS00470 at 97.529 kb on + strand, within BWI76_RS00470 at 97.534 kb on + strand, within BWI76_RS00470 at 97.537 kb on - strand, within BWI76_RS00470 at 97.637 kb on + strand, within BWI76_RS00470 at 97.660 kb on + strand, within BWI76_RS00470 at 97.668 kb on - strand, within BWI76_RS00470 at 97.668 kb on - strand, within BWI76_RS00470 at 97.701 kb on - strand, within BWI76_RS00470 at 97.737 kb on + strand, within BWI76_RS00470 at 97.774 kb on + strand at 97.793 kb on + strand at 97.806 kb on - strand at 97.882 kb on - strand at 97.944 kb on - strand at 98.110 kb on - strand, within BWI76_RS00475 at 98.237 kb on - strand, within BWI76_RS00475 at 98.312 kb on + strand, within BWI76_RS00475 at 98.315 kb on - strand, within BWI76_RS00475 at 98.386 kb on + strand, within BWI76_RS00475 at 98.443 kb on + strand, within BWI76_RS00475 at 98.499 kb on - strand, within BWI76_RS00475 at 98.529 kb on - strand, within BWI76_RS00475 at 98.560 kb on - strand, within BWI76_RS00475 at 98.561 kb on - strand, within BWI76_RS00475 at 98.652 kb on + strand, within BWI76_RS00475
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 96,456 - BWI76_RS00465 0.70 +1.5 96,574 + BWI76_RS00465 0.75 +0.7 96,574 + BWI76_RS00465 0.75 -0.5 96,582 - BWI76_RS00465 0.75 +1.3 96,582 - BWI76_RS00465 0.75 +1.7 96,582 - BWI76_RS00465 0.75 +2.0 96,604 + BWI76_RS00465 0.76 +1.0 96,813 - BWI76_RS00465 0.85 +3.3 96,861 + BWI76_RS00465 0.87 -0.1 97,211 + +3.3 97,222 + +3.6 97,349 + BWI76_RS00470 0.21 +1.5 97,406 + BWI76_RS00470 0.31 +1.9 97,492 - BWI76_RS00470 0.46 -0.1 97,529 + BWI76_RS00470 0.52 +1.5 97,529 + BWI76_RS00470 0.52 +1.3 97,529 + BWI76_RS00470 0.52 +1.6 97,529 + BWI76_RS00470 0.52 +3.2 97,534 + BWI76_RS00470 0.53 +3.0 97,537 - BWI76_RS00470 0.53 +1.8 97,637 + BWI76_RS00470 0.70 +0.5 97,660 + BWI76_RS00470 0.74 +3.1 97,668 - BWI76_RS00470 0.76 +0.2 97,668 - BWI76_RS00470 0.76 +2.6 97,701 - BWI76_RS00470 0.81 +0.5 97,737 + BWI76_RS00470 0.87 +1.2 97,774 + +2.3 97,793 + +0.7 97,806 - +0.6 97,882 - -0.4 97,944 - +3.3 98,110 - BWI76_RS00475 0.17 +1.4 98,237 - BWI76_RS00475 0.32 +1.6 98,312 + BWI76_RS00475 0.41 +1.8 98,315 - BWI76_RS00475 0.41 +0.9 98,386 + BWI76_RS00475 0.50 +2.1 98,443 + BWI76_RS00475 0.57 +1.9 98,499 - BWI76_RS00475 0.63 +1.4 98,529 - BWI76_RS00475 0.67 +1.3 98,560 - BWI76_RS00475 0.71 +1.6 98,561 - BWI76_RS00475 0.71 +0.0 98,652 + BWI76_RS00475 0.82 +2.4
Or see this region's nucleotide sequence