Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2577

Experiment: Varel_Bryant medium with Irgasan 0.005 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Irgasan 0.005 mM
3,215,525	+		BT2576	0.48	+0.2
3,215,526	-		BT2576	0.48	+1.7
3,215,613	+		BT2576	0.55	-0.6
3,215,614	-		BT2576	0.55	+1.0
3,215,614	-		BT2576	0.55	+2.0
3,215,639	+		BT2576	0.57	-0.8
3,215,663	-		BT2576	0.59	-0.8
3,215,678	+		BT2576	0.60	-0.5
3,215,723	-		BT2576	0.64	+0.2
3,215,798	-		BT2576	0.70	+1.7
3,215,798	-		BT2576	0.70	-1.2
3,215,811	-		BT2576	0.71	-0.9
3,215,828	+		BT2576	0.72	-1.2
3,215,829	-		BT2576	0.72	-1.2
3,215,829	-		BT2576	0.72	-1.2
3,215,829	-		BT2576	0.72	-1.0
3,215,829	-		BT2576	0.72	-1.3
3,215,834	-		BT2576	0.73	-1.9
3,215,834	-		BT2576	0.73	-0.0
3,215,839	+		BT2576	0.73	-0.6
3,215,840	-		BT2576	0.73	+1.0
3,215,944	-		BT2576	0.82	-0.0
3,216,020	+		BT2576	0.88	-0.0
3,216,026	+		BT2576	0.88	-0.3
3,216,038	+		BT2576	0.89	-0.3
3,216,049	+				-1.1
3,216,050	-				-1.3
3,216,058	+				+0.7
3,216,065	+				+0.5
3,216,066	-				-1.6
3,216,102	+				-0.3
3,216,161	-				+2.0
3,216,187	+				-0.9
3,216,188	-				+2.6
3,216,188	-				-0.6
3,216,190	+				+0.4
3,216,190	+				-0.9
3,216,191	-				+0.1
3,216,226	-				+1.6
3,216,257	+				-1.2
3,216,266	+				-0.0
3,216,266	+				+1.0
3,216,267	-				-1.3
3,216,267	-				-1.0
3,216,268	+				-1.0
3,216,269	-				-0.4
3,216,269	-				+0.4
3,216,269	-				-0.2
3,216,269	-				+0.2
3,216,269	-				-0.7
3,216,269	-				-0.3
3,216,270	+				-0.2
3,216,270	+				-0.6
3,216,270	+				+2.0
3,216,271	-				+1.0
3,216,271	-				-0.0
3,216,280	+				+1.0
3,216,287	+				-1.0
3,216,317	+				-1.3
3,216,328	+				-0.0
3,216,329	-				-1.0
3,216,356	+				-0.4
3,216,356	+				-0.3
3,216,356	+				+0.3
3,216,356	+				+1.0
3,216,357	-				-1.0
3,216,367	-				-0.7
3,216,373	-				-0.7
3,216,382	-				-0.1
3,216,383	+				-0.6
3,216,405	+				-1.3
3,216,406	-				+0.6
3,216,406	-				-0.6
3,216,413	+				+1.0
3,216,413	+				-0.2
3,216,454	-				-0.6
3,216,488	+				-0.3
3,216,497	+				-0.0
3,216,498	-				-0.5
3,216,507	-				-0.5
3,216,520	-				-1.0
3,216,535	+				-0.6
3,216,536	-				-0.5
3,216,549	-				-0.6
3,216,557	+				+0.3
3,216,641	+				+1.0
3,216,649	+				+1.5
3,216,650	-				+0.6
3,216,656	+				+0.6
3,216,659	-				+0.6
3,216,712	+				+0.5
3,216,736	+				+2.6
3,216,759	+				+1.3
3,216,759	+				+1.3
3,216,762	+				+0.3
3,216,763	-				+2.1
3,216,792	+				+0.4
3,216,803	+				+0.7
3,216,804	-				+1.0
3,216,805	+				+0.8
3,216,805	+				-0.0
3,216,806	-				+0.6
3,216,806	-				+2.3
3,216,838	+				-0.5
3,216,839	-				+0.7
3,216,854	+				+0.6
3,216,885	-				+1.2
3,216,896	+				+1.9
3,216,897	-				+1.3
3,216,948	+		BT2577	0.10	+0.8
3,216,949	-		BT2577	0.10	+0.1
3,216,949	-				+1.2
3,216,949	-		BT2577	0.10	+2.4
3,216,950	+		BT2577	0.10	-0.0
3,216,951	-		BT2577	0.10	-0.1
3,216,951	-		BT2577	0.10	+1.6
3,216,951	-		BT2577	0.10	-0.3
3,216,956	-		BT2577	0.10	+2.0
3,216,980	+		BT2577	0.11	+0.7
3,217,014	+		BT2577	0.12	+0.6
3,217,081	+		BT2577	0.13	+0.9
3,217,082	-		BT2577	0.13	+2.0
3,217,083	+		BT2577	0.13	+0.0
3,217,083	+		BT2577	0.13	+0.6
3,217,083	+		BT2577	0.13	+0.3
3,217,084	-		BT2577	0.13	+0.6
3,217,112	+		BT2577	0.14	+1.0
3,217,112	+		BT2577	0.14	+2.6
3,217,262	-		BT2577	0.18	+0.7
3,217,284	+		BT2577	0.18	+0.7
3,217,284	+		BT2577	0.18	+1.0
3,217,307	-		BT2577	0.19	+0.6
3,217,313	-		BT2577	0.19	+0.5
3,217,328	+		BT2577	0.19	+1.0
3,217,328	+		BT2577	0.19	-0.3
3,217,329	-		BT2577	0.19	+1.0
3,217,333	-		BT2577	0.19	+0.4
3,217,333	-		BT2577	0.19	-0.1
3,217,382	+		BT2577	0.20	+0.6
3,217,383	-				+1.0
3,217,416	+		BT2577	0.21	+1.3
3,217,416	+		BT2577	0.21	-0.6
3,217,483	+		BT2577	0.23	+1.4
3,217,484	-		BT2577	0.23	+0.4
3,217,488	-		BT2577	0.23	+0.3
3,217,522	-		BT2577	0.24	+0.6
3,217,525	-		BT2577	0.24	+1.0
3,217,574	-		BT2577	0.25	+1.0
3,217,605	-		BT2577	0.26	+2.6
3,217,621	+		BT2577	0.26	+0.2
3,217,622	-		BT2577	0.26	+0.3
3,217,622	-		BT2577	0.26	-1.2
3,217,622	-		BT2577	0.26	+0.4
3,217,641	+		BT2577	0.27	+2.0
3,217,642	-		BT2577	0.27	+1.1
3,217,664	+		BT2577	0.27	+3.0
3,217,665	-		BT2577	0.27	-0.2
3,217,665	-		BT2577	0.27	-3.0
3,217,693	+		BT2577	0.28	+0.9
3,217,696	+		BT2577	0.28	+0.4
3,217,697	-		BT2577	0.28	+0.4
3,217,697	-		BT2577	0.28	+0.2
3,217,701	+		BT2577	0.28	+0.3
3,217,720	+		BT2577	0.28	+1.0
3,217,723	+		BT2577	0.29	+0.7
3,217,808	-		BT2577	0.31	+1.2
3,217,810	-		BT2577	0.31	+0.5
3,217,844	-		BT2577	0.31	+0.3
3,217,845	+		BT2577	0.31	+0.6
3,217,845	+		BT2577	0.31	-0.6
3,217,845	+		BT2577	0.31	+0.2
3,217,889	+		BT2577	0.32	-0.0
3,217,889	+		BT2577	0.32	+0.7
3,217,889	+		BT2577	0.32	-0.2
3,217,890	-		BT2577	0.32	+1.6
3,217,899	+		BT2577	0.33	+1.0
3,217,900	-		BT2577	0.33	+0.9
3,217,922	+		BT2577	0.33	+0.8
3,217,924	+		BT2577	0.33	+0.6
3,217,924	+		BT2577	0.33	+4.0
3,217,925	-		BT2577	0.33	-0.3
3,217,983	+		BT2577	0.35	+1.3
3,217,984	-		BT2577	0.35	+0.8
3,217,986	+		BT2577	0.35	+1.0
3,218,027	+		BT2577	0.36	+0.5
3,218,059	-		BT2577	0.36	+1.4
3,218,061	+		BT2577	0.37	-0.6
3,218,072	+		BT2577	0.37	+1.9
3,218,072	+		BT2577	0.37	+2.0
3,218,117	+		BT2577	0.38	+1.2
3,218,118	-		BT2577	0.38	-0.1
3,218,124	-		BT2577	0.38	+0.7
3,218,142	+		BT2577	0.38	-0.0
3,218,144	+		BT2577	0.38	+1.0
3,218,154	-		BT2577	0.39	+0.8
3,218,160	+		BT2577	0.39	+2.4
3,218,161	-		BT2577	0.39	+1.0
3,218,217	-		BT2577	0.40	+1.3
3,218,248	+		BT2577	0.41	+0.6
3,218,249	-		BT2577	0.41	+0.8
3,218,291	-		BT2577	0.42	+0.6
3,218,335	+		BT2577	0.43	+0.4
3,218,335	+		BT2577	0.43	+2.4
3,218,336	-		BT2577	0.43	+0.6
3,218,338	-		BT2577	0.43	+0.3
3,218,363	+		BT2577	0.44	-0.2
3,218,367	+		BT2577	0.44	-1.0
3,218,367	+		BT2577	0.44	+0.9
3,218,368	-		BT2577	0.44	+0.8
3,218,371	+		BT2577	0.44	+0.8
3,218,380	-		BT2577	0.44	+0.4
3,218,403	+		BT2577	0.45	+0.5
3,218,403	+		BT2577	0.45	+0.9
3,218,403	+		BT2577	0.45	+0.7
3,218,463	-		BT2577	0.46	-1.8
3,218,468	+		BT2577	0.46	+0.2
3,218,468	+		BT2577	0.46	+1.0
3,218,556	-		BT2577	0.48	-0.2
3,218,557	+		BT2577	0.48	-0.6
3,218,557	+		BT2577	0.48	+0.1
3,218,574	-		BT2577	0.49	+1.0
3,218,575	+		BT2577	0.49	+0.9
3,218,589	-		BT2577	0.49	+1.2
3,218,598	+		BT2577	0.49	+0.8
3,218,602	-		BT2577	0.49	-0.0
3,218,610	+		BT2577	0.50	+0.3
3,218,647	-		BT2577	0.50	+0.2
3,218,647	-		BT2577	0.50	+0.9
3,218,667	+		BT2577	0.51	+0.7
3,218,667	+		BT2577	0.51	+0.4
3,218,667	+		BT2577	0.51	+0.5
3,218,668	-		BT2577	0.51	-1.0
3,218,722	+		BT2577	0.52	-0.2
3,218,722	+		BT2577	0.52	+1.0
3,218,723	-		BT2577	0.52	+1.5
3,218,756	+		BT2577	0.53	+0.9
3,218,757	-		BT2577	0.53	+1.6
3,218,757	-		BT2577	0.53	+1.5
3,218,757	-		BT2577	0.53	+1.1
3,218,769	-		BT2577	0.53	+2.8
3,218,769	-		BT2577	0.53	+1.2
3,218,814	+		BT2577	0.54	+0.8
3,218,817	+		BT2577	0.54	+1.9
3,218,818	-		BT2577	0.54	+0.9
3,218,863	+		BT2577	0.56	+0.9
3,218,863	+		BT2577	0.56	+0.4
3,218,890	+		BT2577	0.56	+0.3
3,218,890	+		BT2577	0.56	+1.1
3,218,890	+		BT2577	0.56	+1.6
3,218,890	+		BT2577	0.56	+1.1
3,218,956	-		BT2577	0.58	+0.3
3,218,981	-		BT2577	0.58	-0.0
3,218,998	-		BT2577	0.59	+0.5
3,219,009	+		BT2577	0.59	+1.0
3,219,009	+		BT2577	0.59	+0.7
3,219,009	+		BT2577	0.59	+0.7
3,219,044	-		BT2577	0.60	+1.2
3,219,102	+		BT2577	0.61	+0.7
3,219,103	-		BT2577	0.61	+0.3
3,219,152	+		BT2577	0.62	+0.8
3,219,176	+		BT2577	0.63	+0.6
3,219,210	-		BT2577	0.64	+0.2
3,219,238	+		BT2577	0.64	+0.8
3,219,238	+		BT2577	0.64	-1.0
3,219,239	-		BT2577	0.64	-0.1
3,219,243	+		BT2577	0.65	+1.1
3,219,244	-		BT2577	0.65	+2.0
3,219,244	-		BT2577	0.65	+2.0
3,219,265	+		BT2577	0.65	+1.7
3,219,277	+		BT2577	0.65	+1.0
3,219,297	-		BT2577	0.66	+0.6
3,219,297	-		BT2577	0.66	+2.3
3,219,302	+		BT2577	0.66	+0.9
3,219,302	+		BT2577	0.66	+0.9
3,219,302	+		BT2577	0.66	+0.9
3,219,303	-		BT2577	0.66	+0.7
3,219,303	-		BT2577	0.66	+1.4
3,219,368	-		BT2577	0.67	+0.8
3,219,425	-		BT2577	0.69	-0.0
3,219,433	-		BT2577	0.69	+2.1
3,219,458	-		BT2577	0.70	+3.2
3,219,464	+		BT2577	0.70	+0.5
3,219,465	-		BT2577	0.70	+1.8
3,219,465	-		BT2577	0.70	-0.6
3,219,465	-		BT2577	0.70	+0.6
3,219,552	+		BT2577	0.72	+0.8
3,219,552	+		BT2577	0.72	+1.0
3,219,559	+		BT2577	0.72	+3.0
3,219,559	+		BT2577	0.72	+1.2
3,219,603	-		BT2577	0.73	+2.0
3,219,604	+		BT2577	0.73	+0.4
3,219,604	+		BT2577	0.73	+1.4
3,219,605	-		BT2577	0.73	+1.1
3,219,605	-		BT2577	0.73	+0.8
3,219,633	+		BT2577	0.74	+0.9
3,219,738	+		BT2577	0.76	+3.0
3,219,739	-		BT2577	0.76	+1.4
3,219,810	+		BT2577	0.78	+1.2
3,219,811	-		BT2577	0.78	-1.6
3,219,811	-		BT2577	0.78	+0.6
3,219,817	-		BT2577	0.78	+0.8
3,219,817	-		BT2577	0.78	+0.0
3,219,835	+		BT2577	0.79	-0.6
3,219,835	+		BT2577	0.79	+1.0
3,219,856	+		BT2577	0.79	+1.1
3,219,856	+		BT2577	0.79	+0.4
3,219,857	-		BT2577	0.79	+1.8
3,219,857	-		BT2577	0.79	+0.8
3,219,857	-		BT2577	0.79	+1.3
3,219,959	-		BT2577	0.81	+0.5
3,219,972	-		BT2577	0.82	+0.1
3,220,019	-		BT2577	0.83	+0.5
3,220,042	+		BT2577	0.83	-0.0
3,220,044	+		BT2577	0.83	+2.0
3,220,045	-		BT2577	0.83	+2.6
3,220,045	-		BT2577	0.83	+1.0
3,220,086	+		BT2577	0.84	+1.7
3,220,087	-		BT2577	0.84	-0.6
3,220,090	+		BT2577	0.85	+1.0
3,220,091	-		BT2577	0.85	+0.6
3,220,111	+		BT2577	0.85	+0.4
3,220,114	+		BT2577	0.85	+0.6
3,220,123	+		BT2577	0.85	+0.8
3,220,135	+		BT2577	0.86	+0.5
3,220,154	-		BT2577	0.86	-1.0
3,220,154	-		BT2577	0.86	+0.2
3,220,191	+		BT2577	0.87	+0.7
3,220,192	-		BT2577	0.87	+0.1
3,220,222	+		BT2577	0.88	+1.2
3,220,307	+		BT2577	0.90	+0.9
3,220,308	-		BT2577	0.90	-0.0
3,220,329	-				+1.3
3,220,387	+				+0.3
3,220,410	+				+1.0
3,220,410	+				+0.9
3,220,412	+				+1.2
3,220,413	-				+1.3
3,220,413	-				+1.9
3,220,437	+				+2.4
3,220,437	+				+0.8
3,220,437	+				+0.7
3,220,438	-				-0.6
3,220,452	-				+0.8
3,220,459	+				+0.7
3,220,459	+				+0.4
3,220,460	-				+0.5
3,220,460	-				+1.7
3,220,462	-				+0.7
3,220,491	-				+0.7
3,220,494	-				+0.7
3,220,509	-				+2.1
3,220,549	+				+0.6
3,220,579	+				+0.9
3,220,582	-				+0.5
3,220,585	+				+0.3
3,220,586	-				+1.1
3,220,640	+				+0.4
3,220,641	-				+1.4
3,220,652	-				+1.1
3,220,652	-				+0.7
3,220,703	+				+0.9
3,220,703	+				+0.4
3,220,706	+				+0.7
3,220,706	+				+0.5
3,220,706	+				+0.2
3,220,707	-				+1.4
3,220,715	+				+0.4
3,220,724	-				+1.0
3,220,734	+				+1.3
3,220,741	+				+0.8
3,220,741	+				+0.5
3,220,741	+				+1.0
3,220,742	-				+0.9
3,220,742	-				+0.8
3,220,742	-				+1.6
3,220,742	-				+0.4
3,220,742	-				-1.0
3,220,754	+				+0.4
3,220,755	-				+1.0
3,220,785	+				+0.7
3,220,785	+				+0.5
3,220,785	+				+2.2
3,220,785	+				+0.7
3,220,786	-				+0.8
3,220,866	-		BT2578	0.12	+2.0
3,220,878	+		BT2578	0.13	+0.3
3,220,938	+		BT2578	0.18	+1.2
3,220,939	-		BT2578	0.18	+2.6
3,220,940	+		BT2578	0.18	+1.8
3,221,006	+		BT2578	0.24	+0.8
3,221,009	+		BT2578	0.24	+1.5
3,221,009	+		BT2578	0.24	+2.0
3,221,010	-		BT2578	0.24	+0.7
3,221,044	+		BT2578	0.27	+0.8
3,221,070	-		BT2578	0.29	+0.9
3,221,105	+		BT2578	0.32	+0.7
3,221,106	-		BT2578	0.32	+3.0
3,221,106	-		BT2578	0.32	+0.9
3,221,127	-		BT2578	0.34	+1.0
3,221,204	+		BT2578	0.40	+1.5
3,221,206	+		BT2578	0.41	+1.2
3,221,206	+		BT2578	0.41	+0.4
3,221,206	+		BT2578	0.41	+2.2
3,221,249	+		BT2578	0.44	-1.3
3,221,275	-		BT2578	0.46	+0.7
3,221,289	+		BT2578	0.47	+0.1
3,221,307	+		BT2578	0.49	+0.9
3,221,335	+		BT2578	0.51	-0.2
3,221,457	-		BT2578	0.62	+1.7
3,221,459	-		BT2578	0.62	+0.7
3,221,545	+		BT2578	0.69	+1.5
3,221,583	+		BT2578	0.72	+0.1
3,221,627	-		BT2578	0.76	+1.0
3,221,649	-		BT2578	0.78	+0.6
3,221,650	+		BT2578	0.78	+0.9
3,221,650	+		BT2578	0.78	-0.3
3,221,658	-		BT2578	0.78	+1.6
3,221,659	+		BT2578	0.78	+0.7
3,221,659	+		BT2578	0.78	-1.0
3,221,660	-		BT2578	0.79	-0.6
3,221,660	-		BT2578	0.79	-0.5
3,221,665	-		BT2578	0.79	+0.6
3,221,665	-		BT2578	0.79	+0.8
3,221,703	-		BT2578	0.82	+0.9
3,221,705	+		BT2578	0.82	+1.2
3,221,705	+		BT2578	0.82	+0.8
3,221,705	+		BT2578	0.82	+0.9
3,221,705	+		BT2578	0.82	+0.7
3,221,706	-		BT2578	0.82	+1.5
3,221,706	-		BT2578	0.82	+0.7
3,221,706	-		BT2578	0.82	+1.1
3,221,718	+		BT2578	0.83	+0.4
3,221,734	-		BT2578	0.85	+1.0