Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003264

Experiment: Burk1_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Burk1_10
3,679,430	+		ABIE53_003262	0.42	+0.3
3,679,430	+		ABIE53_003262	0.42	+0.0
3,679,430	+		ABIE53_003262	0.42	+0.0
3,679,431	-		ABIE53_003262	0.42	-0.4
3,679,588	-		ABIE53_003262	0.69	+1.5
3,679,588	-		ABIE53_003262	0.69	-1.2
3,679,646	+		ABIE53_003262	0.78	-1.8
3,679,646	+		ABIE53_003262	0.78	+0.1
3,679,646	+		ABIE53_003262	0.78	+1.1
3,679,646	+		ABIE53_003262	0.78	-0.4
3,679,646	+		ABIE53_003262	0.78	+1.0
3,679,646	+		ABIE53_003262	0.78	-0.8
3,679,647	-		ABIE53_003262	0.79	+0.0
3,679,647	-		ABIE53_003262	0.79	+1.1
3,679,647	-		ABIE53_003262	0.79	+0.2
3,679,647	-		ABIE53_003262	0.79	+0.0
3,679,735	+				-0.4
3,679,736	-				+3.6
3,679,773	+				+0.0
3,679,773	+				+0.0
3,679,773	+				-0.7
3,679,774	-				-0.4
3,679,774	-				-0.6
3,679,806	+				+0.0
3,679,806	+				-1.2
3,679,806	+				+0.6
3,679,806	+				+0.0
3,679,806	+				-0.4
3,679,806	+				-0.1
3,679,807	-				+1.3
3,679,807	-				+1.6
3,680,143	+				+2.6
3,680,143	+				-0.1
3,680,143	+				-0.4
3,680,143	+				-1.2
3,680,143	+				-0.4
3,680,144	-				+1.1
3,680,144	-				+1.1
3,680,144	-				+1.1
3,680,144	-				+0.3
3,680,144	-				+0.0
3,680,144	-				-0.2
3,680,144	-				+0.2
3,680,144	-				+0.0
3,680,144	-				-0.4
3,680,144	-				+0.9
3,680,144	-				-0.7
3,680,236	-				+0.4
3,680,263	+				+0.4
3,680,263	+				+1.6
3,680,263	+				+0.2
3,680,263	+				-1.0
3,680,263	+				+0.6
3,680,264	-				+0.2
3,680,264	-				-0.8
3,680,297	+				+1.5
3,680,297	+				-2.5
3,680,297	+				+0.2
3,680,297	+				+1.2
3,680,298	-				-0.7
3,680,298	-				-0.7
3,680,298	-				+1.1
3,680,298	-				+1.6
3,680,298	-				-2.0
3,680,298	-				-0.2
3,680,298	-				-1.2
3,680,298	-				+0.3
3,680,298	-				-0.7
3,680,301	+				+0.0
3,680,301	+				-0.1
3,680,301	+				-0.2
3,680,301	+				-0.8
3,680,302	-				+0.2
3,680,302	-				-0.5
3,680,329	+				+0.3
3,680,329	+				+0.3
3,680,329	+				+2.2
3,680,330	-				+0.0
3,680,330	-				-0.4
3,680,396	-				-0.1
3,680,411	+				+0.4
3,680,411	+				-0.7
3,680,411	+				+1.6
3,680,411	+				-0.0
3,680,412	-				-1.2
3,680,412	-				-2.1
3,680,412	-				-0.0
3,680,412	-				+0.2
3,680,412	-				-0.1
3,680,468	+				-1.1
3,680,468	+				-1.0
3,680,468	+				+0.3
3,680,468	+				-0.6
3,680,468	+				-0.4
3,680,469	-				+0.6
3,680,469	-				+0.9
3,680,469	-				+0.7
3,680,469	-				+1.0
3,680,469	-				+0.2
3,680,489	+				-2.5
3,680,489	+				-1.0
3,680,489	+				+0.6
3,680,489	+				+0.6
3,680,490	-				+0.6
3,680,490	-				+0.6
3,680,490	-				-0.1
3,680,491	+				+0.3
3,680,491	+				-0.9
3,680,491	+				-1.2
3,680,491	+				+0.0
3,680,491	+				-1.0
3,680,491	+				-0.3
3,680,491	+				-0.5
3,680,491	+				+0.0
3,680,491	+				+0.1
3,680,491	+				-0.2
3,680,491	+				+1.0
3,680,491	+				-0.4
3,680,491	+				-1.7
3,680,491	+				-0.5
3,680,491	+				-1.4
3,680,491	+				+0.6
3,680,491	+				+0.9
3,680,491	+				-0.8
3,680,491	+				+0.1
3,680,492	-				-0.7
3,680,492	-				+0.7
3,680,492	-				+0.9
3,680,492	-				-0.4
3,680,492	-				+0.7
3,680,492	-				-0.6
3,680,492	-				+1.6
3,680,492	-				-1.0
3,680,492	-				-0.7
3,680,492	-				-0.1
3,680,492	-				+0.6
3,680,492	-				+1.6
3,680,492	-				-0.5
3,680,492	-				-0.4
3,680,492	-				+0.4
3,680,492	-				-0.3
3,680,492	-				-0.1
3,680,492	-				+0.2
3,680,492	-				+0.3
3,680,492	-				+0.2
3,680,492	-				-1.4
3,680,498	+				-0.3
3,680,499	-				-0.3
3,680,543	+				-0.4
3,680,543	+				+0.6
3,680,543	+				+0.0
3,680,544	-				-2.2
3,680,544	-				+0.7
3,680,544	-				-3.4
3,680,544	-				-0.5
3,680,594	+		ABIE53_003264	0.12	-0.1
3,680,594	+		ABIE53_003264	0.12	-0.7
3,680,594	+		ABIE53_003264	0.12	-0.0
3,680,594	+		ABIE53_003264	0.12	-0.4
3,680,594	+		ABIE53_003264	0.12	-0.4
3,680,594	+		ABIE53_003264	0.12	-1.5
3,680,594	+		ABIE53_003264	0.12	+0.4
3,680,594	+		ABIE53_003264	0.12	+0.8
3,680,602	+		ABIE53_003264	0.13	-0.6
3,680,602	+		ABIE53_003264	0.13	+0.1
3,680,602	+		ABIE53_003264	0.13	-0.1
3,680,603	-		ABIE53_003264	0.13	+1.6
3,680,603	-		ABIE53_003264	0.13	-1.1
3,680,603	-		ABIE53_003264	0.13	+0.7
3,680,630	+		ABIE53_003264	0.15	+1.0
3,680,630	+		ABIE53_003264	0.15	-0.2
3,680,630	+		ABIE53_003264	0.15	-1.0
3,680,631	-		ABIE53_003264	0.15	+0.8
3,680,680	+		ABIE53_003264	0.19	-1.1
3,680,681	+		ABIE53_003264	0.19	+1.3
3,680,682	-		ABIE53_003264	0.19	-1.6
3,680,833	+		ABIE53_003264	0.30	-0.6
3,680,833	+		ABIE53_003264	0.30	+1.6
3,680,833	+		ABIE53_003264	0.30	-0.4
3,680,833	+		ABIE53_003264	0.30	-1.4
3,680,833	+		ABIE53_003264	0.30	+0.4
3,680,833	+		ABIE53_003264	0.30	+0.3
3,680,833	+		ABIE53_003264	0.30	+0.2
3,680,834	-		ABIE53_003264	0.30	+0.5
3,680,834	-		ABIE53_003264	0.30	+2.6
3,680,834	-		ABIE53_003264	0.30	+0.3
3,680,899	+		ABIE53_003264	0.34	-0.3
3,680,929	+		ABIE53_003264	0.37	+0.3
3,680,929	+		ABIE53_003264	0.37	+0.2
3,680,929	+		ABIE53_003264	0.37	-0.3
3,681,004	+		ABIE53_003264	0.42	+0.6
3,681,004	+		ABIE53_003264	0.42	-0.1
3,681,005	-		ABIE53_003264	0.42	-0.3
3,681,005	-		ABIE53_003264	0.42	-0.9
3,681,071	+		ABIE53_003264	0.47	+0.3
3,681,072	-		ABIE53_003264	0.47	-0.1
3,681,072	-		ABIE53_003264	0.47	+0.1
3,681,072	-		ABIE53_003264	0.47	-1.0
3,681,072	-		ABIE53_003264	0.47	-0.1
3,681,072	-		ABIE53_003264	0.47	-0.7
3,681,072	-		ABIE53_003264	0.47	+1.0
3,681,073	-		ABIE53_003264	0.47	+0.0
3,681,161	+		ABIE53_003264	0.53	-0.7
3,681,241	+		ABIE53_003264	0.59	+0.0
3,681,281	+		ABIE53_003264	0.62	+1.6
3,681,281	+		ABIE53_003264	0.62	-0.6
3,681,282	-		ABIE53_003264	0.62	-0.4
3,681,282	-		ABIE53_003264	0.62	-0.8
3,681,287	+		ABIE53_003264	0.62	+1.0
3,681,287	+		ABIE53_003264	0.62	+1.9
3,681,287	+		ABIE53_003264	0.62	-2.0
3,681,287	+		ABIE53_003264	0.62	+0.6
3,681,287	+		ABIE53_003264	0.62	+0.3
3,681,287	+		ABIE53_003264	0.62	+0.3
3,681,287	+		ABIE53_003264	0.62	-1.7
3,681,287	+		ABIE53_003264	0.62	+1.6
3,681,287	+		ABIE53_003264	0.62	+0.2
3,681,287	+		ABIE53_003264	0.62	-0.7
3,681,287	+		ABIE53_003264	0.62	+0.2
3,681,288	-		ABIE53_003264	0.62	+0.1
3,681,288	-		ABIE53_003264	0.62	-0.4
3,681,288	-		ABIE53_003264	0.62	+0.5
3,681,288	-		ABIE53_003264	0.62	+0.1
3,681,288	-		ABIE53_003264	0.62	+0.0
3,681,288	-		ABIE53_003264	0.62	-0.9
3,681,288	-		ABIE53_003264	0.62	+1.2
3,681,288	-		ABIE53_003264	0.62	+0.9
3,681,288	-		ABIE53_003264	0.62	-1.1
3,681,288	-		ABIE53_003264	0.62	-0.4
3,681,288	-		ABIE53_003264	0.62	-0.7
3,681,288	-		ABIE53_003264	0.62	-0.4
3,681,288	-		ABIE53_003264	0.62	+0.7
3,681,374	+		ABIE53_003264	0.69	+0.6
3,681,443	+		ABIE53_003264	0.74	+0.0
3,681,444	-		ABIE53_003264	0.74	-1.0
3,681,444	-		ABIE53_003264	0.74	+1.0
3,681,444	-		ABIE53_003264	0.74	+1.6
3,681,473	+		ABIE53_003264	0.76	-0.3
3,681,611	+		ABIE53_003264	0.86	+0.0
3,681,611	+		ABIE53_003264	0.86	-0.8
3,681,611	+		ABIE53_003264	0.86	+0.6
3,681,611	+		ABIE53_003264	0.86	+0.0
3,681,611	+		ABIE53_003264	0.86	+1.3
3,681,611	+		ABIE53_003264	0.86	+0.0
3,681,611	+		ABIE53_003264	0.86	-1.8
3,681,611	+		ABIE53_003264	0.86	-0.7
3,681,611	+		ABIE53_003264	0.86	-0.6
3,681,611	+		ABIE53_003264	0.86	+1.6
3,681,611	+		ABIE53_003264	0.86	+1.1
3,681,611	+		ABIE53_003264	0.86	+0.7
3,681,611	+		ABIE53_003264	0.86	+0.3
3,681,612	-		ABIE53_003264	0.86	-0.5
3,681,612	-		ABIE53_003264	0.86	-0.4
3,681,612	-		ABIE53_003264	0.86	-0.5
3,681,612	-		ABIE53_003264	0.86	-1.2
3,681,612	-		ABIE53_003264	0.86	+1.6
3,681,612	-		ABIE53_003264	0.86	+1.2
3,681,631	+		ABIE53_003264	0.87	-1.0
3,681,631	+		ABIE53_003264	0.87	+0.4
3,681,632	-		ABIE53_003264	0.87	+1.6
3,681,632	-		ABIE53_003264	0.87	-1.1
3,681,764	+				-0.6
3,681,764	+				-0.7
3,681,764	+				+0.6
3,681,765	-				+2.6
3,681,765	-				-1.3
3,682,016	+				+0.4
3,682,017	-				+0.8
3,682,484	+		ABIE53_003265	0.25	-1.0
3,682,484	+		ABIE53_003265	0.25	-1.2
3,682,484	+		ABIE53_003265	0.25	-1.2
3,682,484	+		ABIE53_003265	0.25	+1.0
3,682,485	-		ABIE53_003265	0.25	-0.5
3,682,485	-		ABIE53_003265	0.25	-0.8
3,682,485	-		ABIE53_003265	0.25	+2.1
3,682,485	-		ABIE53_003265	0.25	+1.6
3,682,485	-		ABIE53_003265	0.25	-0.5
3,682,485	-		ABIE53_003265	0.25	+2.0
3,682,485	-		ABIE53_003265	0.25	-0.4
3,682,485	-		ABIE53_003265	0.25	+0.6
3,682,536	+		ABIE53_003265	0.28	+0.2
3,682,537	-		ABIE53_003265	0.28	+1.6
3,682,537	-		ABIE53_003265	0.28	+0.3
3,682,538	+		ABIE53_003265	0.28	-0.5
3,682,538	+		ABIE53_003265	0.28	-1.0
3,682,538	+		ABIE53_003265	0.28	-1.0
3,682,538	+		ABIE53_003265	0.28	+0.6
3,682,538	+		ABIE53_003265	0.28	-0.6
3,682,538	+		ABIE53_003265	0.28	-0.7
3,682,538	+		ABIE53_003265	0.28	-0.6
3,682,538	+		ABIE53_003265	0.28	-0.3
3,682,538	+		ABIE53_003265	0.28	-0.4
3,682,538	+		ABIE53_003265	0.28	-0.6
3,682,538	+		ABIE53_003265	0.28	+3.2
3,682,538	+		ABIE53_003265	0.28	+0.0
3,682,538	+		ABIE53_003265	0.28	-0.6
3,682,538	+		ABIE53_003265	0.28	-1.3
3,682,538	+		ABIE53_003265	0.28	+2.2
3,682,539	-		ABIE53_003265	0.29	+0.4
3,682,539	-		ABIE53_003265	0.29	-0.1
3,682,539	-		ABIE53_003265	0.29	-1.2
3,682,539	-		ABIE53_003265	0.29	-0.3
3,682,539	-		ABIE53_003265	0.29	-0.3
3,682,539	-		ABIE53_003265	0.29	+0.3
3,682,539	-		ABIE53_003265	0.29	+1.0
3,682,539	-		ABIE53_003265	0.29	+1.6
3,682,604	+		ABIE53_003265	0.33	-0.2
3,682,604	+		ABIE53_003265	0.33	+0.5
3,682,604	+		ABIE53_003265	0.33	-0.0
3,682,605	-		ABIE53_003265	0.33	+0.3
3,682,605	-		ABIE53_003265	0.33	+0.6
3,682,605	-		ABIE53_003265	0.33	-0.4
3,682,605	-		ABIE53_003265	0.33	-0.3
3,682,605	-		ABIE53_003265	0.33	+0.6
3,682,618	-		ABIE53_003265	0.34	+0.0
3,682,625	+		ABIE53_003265	0.35	-1.0
3,682,625	+		ABIE53_003265	0.35	+1.2
3,682,625	+		ABIE53_003265	0.35	-1.3
3,682,640	+		ABIE53_003265	0.36	+0.9
3,682,640	+		ABIE53_003265	0.36	+1.9
3,682,640	+		ABIE53_003265	0.36	-0.1
3,682,640	+		ABIE53_003265	0.36	-1.5
3,682,641	-		ABIE53_003265	0.36	-0.1
3,682,641	-		ABIE53_003265	0.36	-0.6
3,682,641	-		ABIE53_003265	0.36	+0.6
3,682,760	+		ABIE53_003265	0.44	-2.2
3,682,761	-		ABIE53_003265	0.44	-0.5
3,682,793	+		ABIE53_003265	0.47	+0.0
3,682,794	-		ABIE53_003265	0.47	+0.6
3,682,794	-		ABIE53_003265	0.47	+1.6
3,682,794	-		ABIE53_003265	0.47	+0.3
3,682,794	-		ABIE53_003265	0.47	+3.2