Experiment: nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23855 and BWI76_RS23860 are separated by 190 nucleotides BWI76_RS23860 and BWI76_RS23865 are separated by 186 nucleotides BWI76_RS23865 and BWI76_RS23870 are separated by 60 nucleotides
BWI76_RS23855: BWI76_RS23855 - 6-phospho-beta-glucosidase, at 4,977,365 to 4,978,798
_RS23855
BWI76_RS23860: BWI76_RS23860 - protein disulfide oxidoreductase, at 4,978,989 to 4,979,480
_RS23860
BWI76_RS23865: BWI76_RS23865 - NAD(P)-dependent oxidoreductase, at 4,979,667 to 4,980,410
_RS23865
BWI76_RS23870: BWI76_RS23870 - Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) , at 4,980,471 to 4,983,344
_RS23870
Position (kb)
4978
4979
4980 Strain fitness (log2 ratio)
-2
-1
0
1 at 4978.026 kb on + strand, within BWI76_RS23855 at 4978.046 kb on + strand, within BWI76_RS23855 at 4978.173 kb on + strand, within BWI76_RS23855 at 4978.205 kb on + strand, within BWI76_RS23855 at 4978.223 kb on - strand, within BWI76_RS23855 at 4978.268 kb on - strand, within BWI76_RS23855 at 4978.352 kb on + strand, within BWI76_RS23855 at 4978.452 kb on - strand, within BWI76_RS23855 at 4978.618 kb on + strand, within BWI76_RS23855 at 4978.636 kb on - strand, within BWI76_RS23855 at 4978.672 kb on - strand at 4978.686 kb on + strand at 4978.834 kb on - strand at 4979.169 kb on + strand, within BWI76_RS23860 at 4979.524 kb on + strand at 4979.556 kb on - strand at 4979.580 kb on + strand at 4979.590 kb on + strand at 4979.598 kb on - strand at 4979.606 kb on - strand at 4979.844 kb on + strand, within BWI76_RS23865 at 4980.004 kb on + strand, within BWI76_RS23865 at 4980.012 kb on - strand, within BWI76_RS23865 at 4980.038 kb on + strand, within BWI76_RS23865 at 4980.154 kb on + strand, within BWI76_RS23865 at 4980.162 kb on - strand, within BWI76_RS23865 at 4980.213 kb on + strand, within BWI76_RS23865 at 4980.309 kb on - strand, within BWI76_RS23865 at 4980.309 kb on - strand, within BWI76_RS23865 at 4980.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 20 mM remove 4,978,026 + BWI76_RS23855 0.46 -0.2 4,978,046 + BWI76_RS23855 0.47 -2.0 4,978,173 + BWI76_RS23855 0.56 -0.1 4,978,205 + BWI76_RS23855 0.59 -0.1 4,978,223 - BWI76_RS23855 0.60 -1.3 4,978,268 - BWI76_RS23855 0.63 -0.4 4,978,352 + BWI76_RS23855 0.69 +0.1 4,978,452 - BWI76_RS23855 0.76 -0.8 4,978,618 + BWI76_RS23855 0.87 -0.4 4,978,636 - BWI76_RS23855 0.89 -0.3 4,978,672 - -1.4 4,978,686 + +0.6 4,978,834 - -0.3 4,979,169 + BWI76_RS23860 0.37 -1.3 4,979,524 + +0.2 4,979,556 - +1.0 4,979,580 + +0.4 4,979,590 + -0.1 4,979,598 - -0.6 4,979,606 - -0.1 4,979,844 + BWI76_RS23865 0.24 -0.4 4,980,004 + BWI76_RS23865 0.45 -2.5 4,980,012 - BWI76_RS23865 0.46 +0.0 4,980,038 + BWI76_RS23865 0.50 +0.6 4,980,154 + BWI76_RS23865 0.65 -0.7 4,980,162 - BWI76_RS23865 0.67 -0.3 4,980,213 + BWI76_RS23865 0.73 +0.4 4,980,309 - BWI76_RS23865 0.86 -0.9 4,980,309 - BWI76_RS23865 0.86 +0.9 4,980,339 - +0.2
Or see this region's nucleotide sequence