Experiment: nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13870 and BWI76_RS13875 are separated by 189 nucleotides BWI76_RS13875 and BWI76_RS13880 are separated by 44 nucleotides BWI76_RS13880 and BWI76_RS13885 are separated by 85 nucleotides
BWI76_RS13870: BWI76_RS13870 - hypothetical protein, at 2,892,522 to 2,893,439
_RS13870
BWI76_RS13875: BWI76_RS13875 - CbbBc protein, at 2,893,629 to 2,895,929
_RS13875
BWI76_RS13880: BWI76_RS13880 - lysine transporter LysE, at 2,895,974 to 2,896,591
_RS13880
BWI76_RS13885: BWI76_RS13885 - AraC family transcriptional regulator, at 2,896,677 to 2,897,489
_RS13885
Position (kb)
2893
2894
2895
2896 Strain fitness (log2 ratio)
-2
-1
0
1 at 2892.643 kb on + strand, within BWI76_RS13870 at 2892.667 kb on + strand, within BWI76_RS13870 at 2892.734 kb on + strand, within BWI76_RS13870 at 2892.913 kb on + strand, within BWI76_RS13870 at 2893.156 kb on + strand, within BWI76_RS13870 at 2893.192 kb on - strand, within BWI76_RS13870 at 2893.354 kb on - strand at 2893.496 kb on + strand at 2893.505 kb on + strand at 2893.584 kb on + strand at 2893.867 kb on + strand, within BWI76_RS13875 at 2894.211 kb on - strand, within BWI76_RS13875 at 2894.583 kb on + strand, within BWI76_RS13875 at 2895.073 kb on + strand, within BWI76_RS13875 at 2895.274 kb on + strand, within BWI76_RS13875 at 2895.397 kb on + strand, within BWI76_RS13875 at 2895.561 kb on + strand, within BWI76_RS13875 at 2895.792 kb on - strand at 2896.045 kb on + strand, within BWI76_RS13880 at 2896.468 kb on - strand, within BWI76_RS13880 at 2896.549 kb on - strand at 2896.575 kb on + strand at 2896.628 kb on - strand at 2896.632 kb on + strand at 2896.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 20 mM remove 2,892,643 + BWI76_RS13870 0.13 +0.1 2,892,667 + BWI76_RS13870 0.16 +0.2 2,892,734 + BWI76_RS13870 0.23 -0.7 2,892,913 + BWI76_RS13870 0.43 -0.2 2,893,156 + BWI76_RS13870 0.69 -1.9 2,893,192 - BWI76_RS13870 0.73 -0.3 2,893,354 - -1.9 2,893,496 + -0.3 2,893,505 + +0.7 2,893,584 + +0.0 2,893,867 + BWI76_RS13875 0.10 -1.5 2,894,211 - BWI76_RS13875 0.25 -0.6 2,894,583 + BWI76_RS13875 0.41 -0.9 2,895,073 + BWI76_RS13875 0.63 -1.1 2,895,274 + BWI76_RS13875 0.71 -0.2 2,895,397 + BWI76_RS13875 0.77 +0.4 2,895,561 + BWI76_RS13875 0.84 -0.1 2,895,792 - -0.4 2,896,045 + BWI76_RS13880 0.11 -1.6 2,896,468 - BWI76_RS13880 0.80 +0.2 2,896,549 - -0.4 2,896,575 + +0.5 2,896,628 - -0.9 2,896,632 + -0.3 2,896,708 - +0.1
Or see this region's nucleotide sequence