Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4173

Experiment: Citric Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citric Acid (C)
4,962,360	+		Psyr_4172	0.25	-1.2
4,962,360	+		Psyr_4172	0.25	-1.9
4,962,360	+		Psyr_4172	0.25	+0.1
4,962,360	+		Psyr_4172	0.25	+0.8
4,962,360	+		Psyr_4172	0.25	+1.7
4,962,361	-		Psyr_4172	0.25	-1.5
4,962,361	-		Psyr_4172	0.25	+1.8
4,962,361	-		Psyr_4172	0.25	+0.9
4,962,411	+		Psyr_4172	0.30	-0.7
4,962,411	+		Psyr_4172	0.30	-0.0
4,962,411	+		Psyr_4172	0.30	-1.2
4,962,411	+		Psyr_4172	0.30	+0.7
4,962,411	+		Psyr_4172	0.30	+1.1
4,962,412	-		Psyr_4172	0.30	+1.1
4,962,412	-		Psyr_4172	0.30	+0.4
4,962,412	-		Psyr_4172	0.30	+0.3
4,962,412	-		Psyr_4172	0.30	-1.8
4,962,585	+		Psyr_4172	0.47	+1.5
4,962,732	+		Psyr_4172	0.61	+1.1
4,962,801	+		Psyr_4172	0.68	-0.6
4,962,802	-		Psyr_4172	0.68	-0.1
4,962,802	-		Psyr_4172	0.68	-0.2
4,962,802	-		Psyr_4172	0.68	+0.1
4,962,802	-		Psyr_4172	0.68	-0.9
4,962,802	-		Psyr_4172	0.68	-1.5
4,962,825	+		Psyr_4172	0.71	+0.5
4,962,826	-		Psyr_4172	0.71	+0.8
4,962,826	-		Psyr_4172	0.71	+0.1
4,963,085	+				-1.9
4,963,138	-				+0.3
4,963,165	-				+1.3
4,963,210	-				-0.1
4,963,302	+				-0.6
4,963,303	-				-0.0
4,963,303	-				-1.9
4,963,371	+				-0.3
4,963,372	-				-0.0
4,963,491	+				-1.5
4,963,491	+				-1.9
4,963,491	+				+0.8
4,963,704	+		Psyr_4173	0.17	-0.6
4,963,752	+		Psyr_4173	0.18	+1.4
4,963,753	-		Psyr_4173	0.18	+2.4
4,963,753	-		Psyr_4173	0.18	+0.9
4,963,938	+		Psyr_4173	0.24	-0.4
4,963,938	+		Psyr_4173	0.24	-0.3
4,963,938	+		Psyr_4173	0.24	+0.1
4,963,938	+		Psyr_4173	0.24	+0.3
4,963,938	+		Psyr_4173	0.24	-0.3
4,963,939	-		Psyr_4173	0.24	-2.5
4,963,939	-		Psyr_4173	0.24	+0.3
4,963,998	+		Psyr_4173	0.26	+1.9
4,963,998	+		Psyr_4173	0.26	-0.1
4,963,998	+		Psyr_4173	0.26	-0.9
4,963,999	-		Psyr_4173	0.26	-0.8
4,963,999	-		Psyr_4173	0.26	-0.7
4,964,403	+		Psyr_4173	0.40	+0.2
4,964,403	+		Psyr_4173	0.40	-0.4
4,964,403	+		Psyr_4173	0.40	+2.0
4,964,403	+		Psyr_4173	0.40	-0.3
4,964,403	+		Psyr_4173	0.40	+1.3
4,964,403	+		Psyr_4173	0.40	+0.1
4,964,403	+		Psyr_4173	0.40	+1.0
4,964,403	+		Psyr_4173	0.40	-0.8
4,964,403	+		Psyr_4173	0.40	-0.2
4,964,404	-		Psyr_4173	0.40	-0.8
4,964,404	-		Psyr_4173	0.40	-1.3
4,964,404	-		Psyr_4173	0.40	+2.9
4,964,404	-		Psyr_4173	0.40	+1.7
4,964,404	-		Psyr_4173	0.40	+1.5
4,964,404	-		Psyr_4173	0.40	-0.2
4,964,404	-		Psyr_4173	0.40	+2.0
4,964,404	-		Psyr_4173	0.40	+0.7
4,964,404	-		Psyr_4173	0.40	-2.7
4,964,404	-		Psyr_4173	0.40	+0.1
4,964,404	-		Psyr_4173	0.40	+0.7
4,964,404	-		Psyr_4173	0.40	+2.1
4,964,404	-		Psyr_4173	0.40	+0.1
4,964,404	-		Psyr_4173	0.40	-0.7
4,964,404	-		Psyr_4173	0.40	+1.7
4,964,404	-		Psyr_4173	0.40	-1.0
4,964,404	-		Psyr_4173	0.40	+1.0
4,964,404	-		Psyr_4173	0.40	+0.9
4,964,404	-		Psyr_4173	0.40	+0.1
4,964,602	+		Psyr_4173	0.46	+0.7
4,964,603	-		Psyr_4173	0.46	-1.2
4,964,603	-		Psyr_4173	0.46	+0.3
4,964,640	+		Psyr_4173	0.47	+0.5
4,964,641	-		Psyr_4173	0.47	+1.4
4,964,641	-		Psyr_4173	0.47	+0.3
4,964,641	-		Psyr_4173	0.47	+0.1
4,964,641	-		Psyr_4173	0.47	+1.1
4,964,641	-		Psyr_4173	0.47	+0.6
4,964,641	-		Psyr_4173	0.47	+1.1
4,964,641	-		Psyr_4173	0.47	-0.4
4,964,764	+		Psyr_4173	0.52	+1.1
4,964,764	+		Psyr_4173	0.52	-0.9
4,964,764	+		Psyr_4173	0.52	+0.9
4,964,764	+		Psyr_4173	0.52	+1.3
4,964,765	-		Psyr_4173	0.52	-0.7
4,964,886	+		Psyr_4173	0.56	+2.0
4,964,886	+		Psyr_4173	0.56	+0.9
4,964,887	-		Psyr_4173	0.56	+0.1
4,964,922	-		Psyr_4173	0.57	-0.9
4,964,964	-		Psyr_4173	0.58	+0.8
4,965,039	+		Psyr_4173	0.61	-0.3
4,965,039	+		Psyr_4173	0.61	+0.3
4,965,039	+		Psyr_4173	0.61	+2.8
4,965,164	+		Psyr_4173	0.65	+0.1
4,965,165	-		Psyr_4173	0.65	+1.3
4,965,165	-		Psyr_4173	0.65	+1.3
4,965,165	-		Psyr_4173	0.65	+1.1
4,965,370	-		Psyr_4173	0.72	+2.1
4,965,470	+		Psyr_4173	0.75	+1.1
4,965,512	+		Psyr_4173	0.76	-0.1
4,965,512	+		Psyr_4173	0.76	+0.9
4,965,513	-		Psyr_4173	0.76	+0.5
4,965,513	-		Psyr_4173	0.76	-0.5
4,965,513	-		Psyr_4173	0.76	-0.1
4,965,852	+		Psyr_4173	0.87	-0.3
4,965,852	+		Psyr_4173	0.87	+0.1
4,965,853	-		Psyr_4173	0.87	+0.0
4,965,858	+		Psyr_4173	0.88	-1.5
4,965,858	+		Psyr_4173	0.88	+0.8
4,965,858	+		Psyr_4173	0.88	+1.2
4,965,858	+		Psyr_4173	0.88	+0.1
4,965,858	+		Psyr_4173	0.88	-0.3
4,965,858	+		Psyr_4173	0.88	-0.5
4,965,858	+		Psyr_4173	0.88	-2.0
4,965,858	+		Psyr_4173	0.88	+1.4
4,965,858	+		Psyr_4173	0.88	-0.1
4,965,858	+		Psyr_4173	0.88	+0.1
4,965,858	+		Psyr_4173	0.88	-0.9
4,965,858	+		Psyr_4173	0.88	+0.1
4,965,858	+		Psyr_4173	0.88	+1.7
4,965,859	-		Psyr_4173	0.88	+1.5
4,965,859	-		Psyr_4173	0.88	+0.1
4,965,859	-		Psyr_4173	0.88	-0.9
4,965,859	-		Psyr_4173	0.88	+0.1
4,965,859	-		Psyr_4173	0.88	-1.1
4,965,859	-		Psyr_4173	0.88	-1.4
4,965,859	-		Psyr_4173	0.88	+0.6
4,965,861	+		Psyr_4173	0.88	+0.9
4,965,861	+		Psyr_4173	0.88	+1.1
4,965,861	+		Psyr_4173	0.88	+0.4
4,965,861	+		Psyr_4173	0.88	+0.0
4,965,861	+		Psyr_4173	0.88	+1.3
4,965,862	-		Psyr_4173	0.88	-1.3
4,965,862	-		Psyr_4173	0.88	+0.5
4,965,862	-		Psyr_4173	0.88	+2.1
4,965,862	-		Psyr_4173	0.88	+1.1
4,965,862	-		Psyr_4173	0.88	+1.3
4,965,914	-		Psyr_4173	0.89	+0.9
4,965,954	-				+0.1
4,965,954	-				-1.5
4,965,957	+				+1.4
4,965,957	+				+2.1
4,965,957	+				+0.3
4,965,957	+				-1.5
4,965,957	+				+1.1
4,965,958	-				-0.9
4,965,958	-				+2.3
4,965,958	-				-0.0
4,966,117	-				-1.7
4,966,197	-				-0.1
4,966,197	-				+2.1
4,966,313	+		Psyr_4174	0.25	+0.7
4,966,313	+		Psyr_4174	0.25	-0.9
4,966,313	+		Psyr_4174	0.25	+0.4
4,966,313	+		Psyr_4174	0.25	-1.8
4,966,313	+		Psyr_4174	0.25	-1.1
4,966,439	-		Psyr_4174	0.62	-0.9
4,966,446	-		Psyr_4174	0.64	+0.8
4,966,484	+		Psyr_4174	0.75	+0.7
4,966,484	+		Psyr_4174	0.75	+0.3
4,966,484	+		Psyr_4174	0.75	+0.1
4,966,484	+		Psyr_4174	0.75	-0.9
4,966,484	+		Psyr_4174	0.75	-1.4
4,966,484	+		Psyr_4174	0.75	-0.6
4,966,484	+		Psyr_4174	0.75	+0.6
4,966,484	+		Psyr_4174	0.75	+0.7
4,966,484	+		Psyr_4174	0.75	+0.7
4,966,484	+		Psyr_4174	0.75	-1.5
4,966,484	+		Psyr_4174	0.75	-0.5
4,966,484	+		Psyr_4174	0.75	+0.6
4,966,484	+		Psyr_4174	0.75	+0.8
4,966,484	+		Psyr_4174	0.75	+0.3
4,966,484	+		Psyr_4174	0.75	-1.2
4,966,484	+		Psyr_4174	0.75	+0.3
4,966,485	-		Psyr_4174	0.76	-1.7
4,966,485	-		Psyr_4174	0.76	-0.1
4,966,485	-		Psyr_4174	0.76	+1.9
4,966,485	-		Psyr_4174	0.76	+3.4
4,966,485	-		Psyr_4174	0.76	+1.0
4,966,485	-		Psyr_4174	0.76	-0.7
4,966,485	-		Psyr_4174	0.76	+0.9
4,966,485	-		Psyr_4174	0.76	+0.6
4,966,485	-		Psyr_4174	0.76	-1.7
4,966,505	+		Psyr_4174	0.81	-0.7
4,966,505	+		Psyr_4174	0.81	+0.5
4,966,505	+		Psyr_4174	0.81	+2.4
4,966,505	+		Psyr_4174	0.81	-0.2
4,966,505	+		Psyr_4174	0.81	+0.6
4,966,505	+		Psyr_4174	0.81	+1.3
4,966,505	+		Psyr_4174	0.81	+0.9
4,966,505	+		Psyr_4174	0.81	-0.8
4,966,505	+		Psyr_4174	0.81	+1.0
4,966,505	+		Psyr_4174	0.81	+1.9
4,966,505	+		Psyr_4174	0.81	-1.0
4,966,505	+		Psyr_4174	0.81	-1.7
4,966,505	+		Psyr_4174	0.81	-1.6
4,966,505	+		Psyr_4174	0.81	-0.6
4,966,506	-		Psyr_4174	0.82	-0.4
4,966,506	-		Psyr_4174	0.82	+0.1
4,966,506	-		Psyr_4174	0.82	+1.1
4,966,506	-		Psyr_4174	0.82	-0.5
4,966,506	-		Psyr_4174	0.82	-0.2
4,966,506	-		Psyr_4174	0.82	+0.3
4,966,506	-		Psyr_4174	0.82	+0.1
4,966,506	-		Psyr_4174	0.82	-0.4
4,966,506	-		Psyr_4174	0.82	+0.2
4,966,506	-		Psyr_4174	0.82	-0.3
4,966,506	-		Psyr_4174	0.82	+1.0
4,966,506	-		Psyr_4174	0.82	-0.4
4,966,506	-		Psyr_4174	0.82	+0.1
4,966,506	-		Psyr_4174	0.82	+0.2
4,966,506	-		Psyr_4174	0.82	-0.4
4,966,506	-		Psyr_4174	0.82	-0.1
4,966,512	-		Psyr_4174	0.83	+1.3
4,966,512	-		Psyr_4174	0.83	-0.7
4,966,539	+				-1.9
4,966,607	+				+0.1
4,966,607	+				-1.5
4,966,608	-				-0.2
4,966,647	+				-0.0
4,966,648	-				-1.3
4,966,648	-				+1.5
4,966,658	-				-0.6
4,966,658	-				+1.4
4,966,658	-				-0.5
4,966,709	+				-0.3
4,966,751	+				-1.7
4,966,751	+				+0.4
4,966,752	-		Psyr_4175	0.10	-0.6
4,966,859	+		Psyr_4175	0.40	+0.1
4,966,859	+		Psyr_4175	0.40	+1.6
4,966,860	-		Psyr_4175	0.41	+0.7
4,966,860	-		Psyr_4175	0.41	+1.1
4,966,860	-		Psyr_4175	0.41	+0.3
4,966,931	+		Psyr_4175	0.61	-0.9
4,966,931	+		Psyr_4175	0.61	-1.1
4,966,931	+		Psyr_4175	0.61	+0.5
4,966,931	+		Psyr_4175	0.61	+0.3
4,966,931	+		Psyr_4175	0.61	+0.8
4,966,932	-		Psyr_4175	0.61	-0.6
4,966,932	-		Psyr_4175	0.61	-0.2
4,966,932	-		Psyr_4175	0.61	-0.3
4,966,932	-		Psyr_4175	0.61	+1.7
4,966,932	-		Psyr_4175	0.61	-0.1
4,966,932	-		Psyr_4175	0.61	+1.6
4,966,961	+		Psyr_4175	0.69	+0.4
4,966,961	+		Psyr_4175	0.69	-0.2
4,966,962	-		Psyr_4175	0.69	-3.6
4,966,977	-		Psyr_4175	0.74	-0.7
4,967,069	+				+1.3
4,967,070	-				-0.1
4,967,075	-				+1.7
4,967,188	+				+0.1