Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1844

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
2,315,101	-		BT1843	0.25	-1.3
2,315,101	-		BT1843	0.25	+0.0
2,315,189	+		BT1843	0.32	+1.0
2,315,245	-		BT1843	0.36	-4.5
2,315,302	-		BT1843	0.41	-2.3
2,315,349	-		BT1843	0.45	-3.2
2,315,486	+		BT1843	0.55	-4.3
2,315,524	+		BT1843	0.58	-4.2
2,315,649	-		BT1843	0.68	-2.9
2,315,705	-		BT1843	0.73	-6.2
2,315,901	+		BT1843	0.88	-3.7
2,315,901	+		BT1843	0.88	-2.8
2,315,901	+		BT1843	0.88	+1.0
2,315,905	+		BT1843	0.88	-4.1
2,315,930	+				-1.7
2,315,930	+				-0.6
2,315,930	+				-1.3
2,315,931	-				-2.4
2,315,931	-				-5.2
2,315,931	-				-0.8
2,315,974	+				-2.2
2,315,985	+				-3.9
2,315,989	-				-3.8
2,316,034	-				-1.0
2,316,046	-				-4.9
2,316,092	-				-2.2
2,316,127	+		BT1844	0.16	-1.8
2,316,128	-		BT1844	0.16	-1.0
2,316,130	-		BT1844	0.16	-2.7
2,316,229	+		BT1844	0.36	-2.3
2,316,233	+		BT1844	0.37	-2.6
2,316,233	+				-1.3
2,316,233	+		BT1844	0.37	-2.2
2,316,274	-		BT1844	0.46	-2.3
2,316,337	+		BT1844	0.58	-2.3
2,316,341	-		BT1844	0.59	-2.6
2,316,341	-		BT1844	0.59	-1.7
2,316,394	-		BT1844	0.70	-2.6
2,316,400	+		BT1844	0.71	-0.6
2,316,429	+		BT1844	0.77	-3.4
2,316,429	+		BT1844	0.77	-4.0
2,316,490	-		BT1844	0.89	-1.0
2,316,514	+				-1.3
2,316,568	+				-3.4
2,316,607	+				-0.8
2,316,612	-				-1.9
2,316,618	+				-0.8
2,316,619	-				-0.8
2,316,625	+				+0.0
2,316,628	+				+0.4
2,316,632	+				-0.4
2,316,633	-				-1.3
2,316,642	-				-1.3
2,316,642	-				-1.1
2,316,645	+				+1.0
2,316,682	+				-1.0
2,316,683	-				+0.3
2,316,683	-				-1.0
2,316,683	-				-0.5
2,316,687	-				-1.0
2,316,693	+				-1.2
2,316,697	-				+1.0
2,316,697	-				-0.6
2,316,700	+				-1.8
2,316,825	-		BT1845	0.18	+0.0
2,316,825	-		BT1845	0.18	+1.0
2,316,825	-		BT1845	0.18	-1.2
2,316,826	+		BT1845	0.19	+0.0
2,316,827	-		BT1845	0.19	-0.3
2,317,103	+		BT1845	0.60	-1.6
2,317,360	-				-0.6
2,317,382	-				-2.8
2,317,405	-				+0.0
2,317,437	+				-1.2
2,317,447	+				+1.0
2,317,501	-				-0.4
2,317,525	-				+0.0