Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1264

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
1,567,997	+				-0.1
1,568,020	+				-0.7
1,568,230	+		BT1263	0.44	-1.3
1,568,230	+		BT1263	0.44	-0.5
1,568,447	-		BT1263	0.85	+0.1
1,568,968	-				-0.3
1,568,987	+				-1.3
1,569,010	-				-1.5
1,569,016	+				-1.9
1,569,038	-				-0.5
1,569,041	+				-1.7
1,569,042	-				+1.0
1,569,073	+				-0.5
1,569,074	-				+0.5
1,569,078	-				-2.4
1,569,087	+				-0.3
1,569,088	-				+0.3
1,569,187	+				+1.5
1,569,187	+				+2.1
1,569,187	+				-0.5
1,569,188	-				+1.3
1,569,189	+				+1.1
1,569,251	+				-0.7
1,569,296	-				+2.7
1,569,322	+		BT1264	0.11	+1.1
1,569,322	+		BT1264	0.11	+0.3
1,569,333	+		BT1264	0.11	+0.1
1,569,364	+		BT1264	0.12	-0.5
1,569,405	+		BT1264	0.13	-0.8
1,569,406	-		BT1264	0.13	+0.5
1,569,485	-		BT1264	0.16	-0.5
1,569,498	+		BT1264	0.16	-1.3
1,569,632	+		BT1264	0.20	-0.8
1,569,648	+				-0.5
1,569,649	-		BT1264	0.21	+1.1
1,569,696	+		BT1264	0.23	+0.1
1,569,696	+		BT1264	0.23	+0.1
1,569,713	+		BT1264	0.23	-0.2
1,569,764	+		BT1264	0.25	+0.1
1,569,803	-		BT1264	0.26	+1.3
1,569,834	-		BT1264	0.27	-0.7
1,569,869	-		BT1264	0.28	+1.1
1,569,877	-		BT1264	0.28	-0.2
1,569,883	-		BT1264	0.28	+0.1
1,569,910	+		BT1264	0.29	+1.7
1,569,966	+		BT1264	0.31	+0.5
1,569,969	-		BT1264	0.31	-2.7
1,569,990	-		BT1264	0.32	-0.7
1,569,999	+		BT1264	0.32	+0.0
1,569,999	+		BT1264	0.32	+1.1
1,569,999	+		BT1264	0.32	+0.1
1,570,009	+		BT1264	0.33	+1.1
1,570,010	-		BT1264	0.33	+2.1
1,570,096	-		BT1264	0.35	-0.5
1,570,104	-		BT1264	0.36	-1.9
1,570,110	-		BT1264	0.36	-0.7
1,570,121	+		BT1264	0.36	-0.7
1,570,215	+		BT1264	0.39	+1.1
1,570,233	-		BT1264	0.40	+0.1
1,570,248	+		BT1264	0.40	-0.2
1,570,250	+		BT1264	0.40	+0.1
1,570,458	+		BT1264	0.47	-0.3
1,570,475	+		BT1264	0.47	+1.1
1,570,489	+		BT1264	0.48	-0.8
1,570,492	+		BT1264	0.48	-1.3
1,570,529	-		BT1264	0.49	-0.9
1,570,574	-		BT1264	0.51	+0.5
1,570,581	-		BT1264	0.51	+0.3
1,570,609	-		BT1264	0.52	-1.3
1,570,613	-		BT1264	0.52	+1.5
1,570,737	+		BT1264	0.56	-1.3
1,570,756	+		BT1264	0.56	+1.1
1,570,781	-		BT1264	0.57	-3.5
1,570,801	+		BT1264	0.58	+0.1
1,570,802	-		BT1264	0.58	+1.1
1,570,873	+		BT1264	0.60	+1.1
1,571,082	-		BT1264	0.67	-2.2
1,571,101	+		BT1264	0.68	-0.6
1,571,101	+		BT1264	0.68	-1.0
1,571,101	+				+0.1
1,571,102	-		BT1264	0.68	+2.7
1,571,139	+		BT1264	0.69	-0.5
1,571,147	+		BT1264	0.69	+0.9
1,571,166	-		BT1264	0.70	+0.1
1,571,170	+		BT1264	0.70	-1.7
1,571,171	-		BT1264	0.70	-0.1
1,571,174	-		BT1264	0.70	-0.8
1,571,203	+		BT1264	0.71	+0.2
1,571,239	-		BT1264	0.72	+0.3
1,571,357	+		BT1264	0.76	+1.1
1,571,359	+		BT1264	0.76	+1.1
1,571,375	-		BT1264	0.76	+1.1
1,571,476	-		BT1264	0.80	-0.0
1,571,652	-		BT1264	0.85	-0.8
1,571,731	+		BT1264	0.88	-0.3
1,571,782	-		BT1264	0.89	-0.8
1,571,798	+		BT1264	0.90	-1.2
1,571,888	-				+0.1
1,571,900	+				-1.4
1,571,900	+				+0.3
1,571,989	-				+0.1
1,572,035	+				+0.1
1,572,035	+				-0.5
1,572,083	+				-1.3
1,572,103	+				-1.5
1,572,103	+				+0.1
1,572,104	-				+0.5
1,572,109	+				-0.9
1,572,110	-				-0.4
1,572,196	-				-0.7
1,572,201	+				-1.1
1,572,225	+				+1.1
1,572,254	-		BT1265	0.13	-0.3
1,572,282	-		BT1265	0.16	+0.3
1,572,404	+		BT1265	0.32	-1.8
1,572,422	-		BT1265	0.34	-1.5
1,572,442	-		BT1265	0.36	+1.1
1,572,451	-		BT1265	0.38	-0.5
1,572,653	-		BT1265	0.63	+1.1
1,572,688	+		BT1265	0.67	+0.1
1,572,711	+		BT1265	0.70	-1.3
1,572,712	-		BT1265	0.70	-0.5
1,572,720	-		BT1265	0.71	-1.3
1,572,823	-		BT1265	0.84	-0.3
1,572,836	+		BT1265	0.86	-0.3
1,572,855	+		BT1265	0.88	+0.1
1,572,856	-		BT1265	0.88	-1.3
1,572,888	-				-2.4
1,572,925	-				-1.0
1,572,939	+				-0.8
1,573,023	+				-0.5
1,573,045	-				-0.7