Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5014

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
5,954,139	+		Psyr_5013	0.30	-0.0
5,954,139	+		Psyr_5013	0.30	-1.0
5,954,139	+		Psyr_5013	0.30	-0.3
5,954,139	+		Psyr_5013	0.30	-2.2
5,954,140	-		Psyr_5013	0.30	+0.2
5,954,265	-		Psyr_5013	0.40	-0.8
5,954,324	+		Psyr_5013	0.45	+0.1
5,954,324	+		Psyr_5013	0.45	+0.1
5,954,324	+		Psyr_5013	0.45	+1.0
5,954,324	+		Psyr_5013	0.45	+0.8
5,954,324	+		Psyr_5013	0.45	+1.8
5,954,324	+		Psyr_5013	0.45	-0.4
5,954,324	+		Psyr_5013	0.45	+0.1
5,954,325	-		Psyr_5013	0.45	-0.6
5,954,325	-		Psyr_5013	0.45	+0.1
5,954,353	+		Psyr_5013	0.47	-0.6
5,954,353	+		Psyr_5013	0.47	-0.3
5,954,354	-		Psyr_5013	0.47	+0.4
5,954,354	-		Psyr_5013	0.47	+0.6
5,954,354	-		Psyr_5013	0.47	-0.2
5,954,354	-		Psyr_5013	0.47	+0.4
5,954,359	+		Psyr_5013	0.48	+0.6
5,954,359	+		Psyr_5013	0.48	-0.4
5,954,359	+		Psyr_5013	0.48	+0.6
5,954,359	+		Psyr_5013	0.48	-1.1
5,954,359	+		Psyr_5013	0.48	+0.5
5,954,359	+		Psyr_5013	0.48	+1.2
5,954,359	+		Psyr_5013	0.48	+0.7
5,954,359	+		Psyr_5013	0.48	-2.4
5,954,359	+		Psyr_5013	0.48	+0.1
5,954,359	+		Psyr_5013	0.48	+0.1
5,954,359	+		Psyr_5013	0.48	+0.2
5,954,359	+		Psyr_5013	0.48	+1.0
5,954,360	-		Psyr_5013	0.48	+0.2
5,954,360	-		Psyr_5013	0.48	-1.4
5,954,360	-		Psyr_5013	0.48	-0.2
5,954,360	-		Psyr_5013	0.48	-2.6
5,954,360	-		Psyr_5013	0.48	+0.6
5,954,360	-		Psyr_5013	0.48	-0.4
5,954,360	-		Psyr_5013	0.48	-0.4
5,954,376	+		Psyr_5013	0.49	-0.3
5,954,384	+		Psyr_5013	0.50	+0.5
5,954,384	+		Psyr_5013	0.50	+0.2
5,954,384	+		Psyr_5013	0.50	+2.2
5,954,384	+		Psyr_5013	0.50	+0.2
5,954,384	+		Psyr_5013	0.50	-0.4
5,954,384	+		Psyr_5013	0.50	+0.2
5,954,445	-		Psyr_5013	0.55	-0.7
5,954,618	+		Psyr_5013	0.69	-1.8
5,954,618	+		Psyr_5013	0.69	+0.1
5,954,618	+		Psyr_5013	0.69	+0.7
5,954,618	+		Psyr_5013	0.69	+0.7
5,954,618	+		Psyr_5013	0.69	-0.3
5,954,618	+		Psyr_5013	0.69	+0.1
5,954,618	+		Psyr_5013	0.69	+0.4
5,954,618	+		Psyr_5013	0.69	-3.9
5,954,619	-		Psyr_5013	0.69	+0.2
5,954,619	-		Psyr_5013	0.69	-0.5
5,954,619	-		Psyr_5013	0.69	+1.0
5,954,619	-		Psyr_5013	0.69	-0.3
5,954,619	-		Psyr_5013	0.69	+0.9
5,954,619	-		Psyr_5013	0.69	-1.8
5,954,619	-		Psyr_5013	0.69	-0.8
5,954,654	+		Psyr_5013	0.72	+1.4
5,954,654	+		Psyr_5013	0.72	+0.2
5,954,655	-		Psyr_5013	0.72	+2.2
5,954,757	+		Psyr_5013	0.80	-1.0
5,954,801	+		Psyr_5013	0.84	-0.1
5,954,801	+		Psyr_5013	0.84	-0.6
5,954,801	+		Psyr_5013	0.84	+0.8
5,954,801	+		Psyr_5013	0.84	+0.6
5,954,802	-		Psyr_5013	0.84	-1.4
5,954,802	-		Psyr_5013	0.84	-2.4
5,954,802	-		Psyr_5013	0.84	-0.8
5,954,802	-		Psyr_5013	0.84	-1.1
5,954,802	-		Psyr_5013	0.84	-0.4
5,954,802	-		Psyr_5013	0.84	+1.2
5,954,802	-		Psyr_5013	0.84	+0.1
5,954,804	+		Psyr_5013	0.84	+0.2
5,954,804	+		Psyr_5013	0.84	+0.2
5,954,804	+		Psyr_5013	0.84	+1.5
5,954,805	-		Psyr_5013	0.84	-0.2
5,955,011	+				-3.1
5,955,011	+				-1.1
5,955,012	-				-2.4
5,955,012	-				-0.9
5,955,012	-				+1.2
5,955,014	+				+0.0
5,955,014	+				+0.5
5,955,014	+				-1.2
5,955,015	-				+1.5
5,955,015	-				-0.8
5,955,015	-				-0.5
5,955,080	+				+0.2
5,955,080	+				-0.3
5,955,080	+				+0.2
5,955,080	+				+1.8
5,955,081	-				+1.8
5,955,084	+				+1.0
5,955,084	+				+1.6
5,955,084	+				+0.7
5,955,085	-				-0.1
5,955,085	-				+0.8
5,955,085	-				+2.2
5,955,085	-				-0.2
5,955,374	+		Psyr_5014	0.31	-1.1
5,955,374	+		Psyr_5014	0.31	+0.5
5,955,374	+		Psyr_5014	0.31	-0.4
5,955,375	-		Psyr_5014	0.31	-0.4
5,955,375	-		Psyr_5014	0.31	-1.4
5,955,375	-		Psyr_5014	0.31	-0.2
5,955,649	+		Psyr_5014	0.54	+0.2
5,955,649	+		Psyr_5014	0.54	-0.2
5,955,650	-		Psyr_5014	0.54	-1.0
5,955,650	-		Psyr_5014	0.54	-0.0
5,955,650	-		Psyr_5014	0.54	+0.2
5,955,821	+		Psyr_5014	0.69	-1.4
5,955,821	+		Psyr_5014	0.69	+0.1
5,955,821	+		Psyr_5014	0.69	+3.6
5,955,821	+		Psyr_5014	0.69	+1.2
5,955,821	+		Psyr_5014	0.69	+1.2
5,955,822	-		Psyr_5014	0.69	+0.6
5,955,822	-		Psyr_5014	0.69	-0.5
5,955,822	-		Psyr_5014	0.69	-0.3
5,955,822	-		Psyr_5014	0.69	-1.2
5,955,953	+		Psyr_5014	0.80	+0.8
5,955,953	+		Psyr_5014	0.80	-1.6
5,955,953	+		Psyr_5014	0.80	+1.2
5,955,953	+		Psyr_5014	0.80	-1.2
5,955,953	+		Psyr_5014	0.80	-0.3
5,955,953	+		Psyr_5014	0.80	-0.2
5,955,954	-		Psyr_5014	0.80	-0.9
5,955,954	-		Psyr_5014	0.80	+0.5
5,955,954	-		Psyr_5014	0.80	-0.6
5,955,954	-		Psyr_5014	0.80	+0.0
5,956,231	+				+0.8
5,956,232	-				-0.0
5,956,232	-				+0.6
5,956,232	-				-0.3
5,956,266	-				+0.8
5,956,359	-				-1.2
5,956,549	+		Psyr_5015	0.28	+1.0
5,956,549	+		Psyr_5015	0.28	-0.5
5,956,549	+		Psyr_5015	0.28	-1.1
5,956,549	+		Psyr_5015	0.28	-0.6
5,956,549	+		Psyr_5015	0.28	-0.2
5,956,549	+		Psyr_5015	0.28	+0.2
5,956,550	-		Psyr_5015	0.28	-0.4
5,956,550	-		Psyr_5015	0.28	-0.3
5,956,550	-		Psyr_5015	0.28	+0.7
5,956,550	-		Psyr_5015	0.28	+0.1
5,956,551	+		Psyr_5015	0.28	+1.8
5,956,551	+		Psyr_5015	0.28	-1.4
5,956,551	+		Psyr_5015	0.28	-0.5
5,956,552	-		Psyr_5015	0.28	+1.0
5,956,780	+		Psyr_5015	0.51	+1.5
5,956,780	+		Psyr_5015	0.51	+0.2
5,956,781	-		Psyr_5015	0.51	+0.8
5,956,781	-		Psyr_5015	0.51	-0.0
5,956,781	-		Psyr_5015	0.51	+0.2
5,956,781	-		Psyr_5015	0.51	-1.5
5,956,976	+		Psyr_5015	0.71	-1.6
5,957,002	+		Psyr_5015	0.74	-1.1
5,957,002	+		Psyr_5015	0.74	-0.4
5,957,136	+		Psyr_5015	0.87	+1.2
5,957,142	+		Psyr_5015	0.88	+0.9
5,957,149	+		Psyr_5015	0.89	+0.2
5,957,149	+		Psyr_5015	0.89	+0.2
5,957,149	+		Psyr_5015	0.89	+0.6
5,957,149	+		Psyr_5015	0.89	+0.5
5,957,150	-		Psyr_5015	0.89	-0.1
5,957,150	-		Psyr_5015	0.89	+0.3
5,957,150	-		Psyr_5015	0.89	-1.5
5,957,150	-		Psyr_5015	0.89	-0.8
5,957,150	-		Psyr_5015	0.89	-1.1
5,957,152	+		Psyr_5015	0.89	-1.0
5,957,152	+		Psyr_5015	0.89	-0.1
5,957,152	+		Psyr_5015	0.89	-2.1
5,957,152	+		Psyr_5015	0.89	+1.0
5,957,152	+		Psyr_5015	0.89	-0.5
5,957,152	+		Psyr_5015	0.89	+0.9
5,957,152	+		Psyr_5015	0.89	+0.7
5,957,153	-		Psyr_5015	0.89	+0.4