Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4799

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
5,687,381	+				+0.1
5,687,382	-				-0.5
5,687,382	-				+0.7
5,687,399	-				+2.9
5,687,458	-		Psyr_4797	0.14	+0.1
5,687,968	+		Psyr_4798	0.28	+0.1
5,687,968	+		Psyr_4798	0.28	+0.4
5,687,968	+		Psyr_4798	0.28	-0.9
5,687,968	+		Psyr_4798	0.28	+0.3
5,687,968	+		Psyr_4798	0.28	+0.0
5,687,968	+		Psyr_4798	0.28	+0.4
5,687,968	+		Psyr_4798	0.28	+0.1
5,687,968	+		Psyr_4798	0.28	+0.1
5,687,968	+		Psyr_4798	0.28	-0.9
5,687,968	+		Psyr_4798	0.28	-0.0
5,687,968	+		Psyr_4798	0.28	-0.3
5,687,968	+		Psyr_4798	0.28	-0.1
5,687,968	+		Psyr_4798	0.28	-0.5
5,687,968	+		Psyr_4798	0.28	+1.7
5,687,968	+		Psyr_4798	0.28	-0.8
5,687,968	+		Psyr_4798	0.28	+0.0
5,687,968	+		Psyr_4798	0.28	-0.3
5,687,969	-		Psyr_4798	0.28	-0.8
5,687,969	-		Psyr_4798	0.28	-0.6
5,687,969	-		Psyr_4798	0.28	+0.1
5,687,969	-		Psyr_4798	0.28	+0.5
5,687,969	-		Psyr_4798	0.28	-1.7
5,687,969	-		Psyr_4798	0.28	+0.6
5,687,969	-		Psyr_4798	0.28	+0.7
5,687,969	-		Psyr_4798	0.28	+2.4
5,687,969	-		Psyr_4798	0.28	-2.2
5,688,016	-		Psyr_4798	0.40	+0.0
5,688,209	+		Psyr_4798	0.88	-1.1
5,688,210	-		Psyr_4798	0.88	+0.1
5,688,210	-		Psyr_4798	0.88	-0.4
5,688,257	+				+0.6
5,688,257	+				-0.3
5,688,257	+				-0.7
5,688,257	+				+0.7
5,688,257	+				-0.8
5,688,258	-				-0.3
5,688,258	-				+1.0
5,688,258	-				-1.0
5,688,258	-				+0.7
5,688,258	-				-1.5
5,688,258	-				+1.0
5,688,258	-				+0.4
5,688,258	-				+1.1
5,688,258	-				-0.6
5,688,269	+				+0.5
5,688,271	+				-0.6
5,688,271	+				-0.5
5,688,271	+				+0.1
5,688,271	+				-0.9
5,688,271	+				-1.9
5,688,271	+				+0.4
5,688,271	+				+1.0
5,688,271	+				+2.5
5,688,271	+				+1.0
5,688,272	-				+0.7
5,688,272	-				+0.9
5,688,272	-				+0.5
5,688,272	-				+2.0
5,688,272	-				-2.1
5,688,272	-				+0.4
5,688,318	+				-0.5
5,688,318	+				+1.6
5,688,318	+				+1.4
5,688,318	+				+0.4
5,688,319	-				+0.5
5,688,319	-				-1.5
5,688,319	-				-0.1
5,688,319	-				-1.5
5,688,373	+				-0.2
5,688,373	+				-2.2
5,688,374	-				-0.9
5,688,374	-				+1.7
5,688,384	-				+0.0
5,688,384	-				-1.5
5,688,530	-		Psyr_4799	0.11	+0.1
5,688,569	+		Psyr_4799	0.14	-0.1
5,688,597	+		Psyr_4799	0.16	-0.5
5,688,632	+		Psyr_4799	0.19	-1.9
5,688,931	+		Psyr_4799	0.40	-1.0
5,688,931	+		Psyr_4799	0.40	-2.2
5,688,931	+		Psyr_4799	0.40	-1.7
5,688,932	-		Psyr_4799	0.40	-0.7
5,688,932	-		Psyr_4799	0.40	-0.5
5,689,273	+		Psyr_4799	0.65	+0.1
5,689,274	-		Psyr_4799	0.65	-2.0
5,689,274	-		Psyr_4799	0.65	-0.9
5,689,274	-		Psyr_4799	0.65	+0.1
5,689,274	-		Psyr_4799	0.65	-1.9
5,689,455	+		Psyr_4799	0.78	-2.2
5,689,455	+		Psyr_4799	0.78	-1.9
5,689,455	+		Psyr_4799	0.78	+0.3
5,689,455	+		Psyr_4799	0.78	-2.2
5,689,455	+		Psyr_4799	0.78	-1.1
5,689,455	+		Psyr_4799	0.78	+0.1
5,689,456	-		Psyr_4799	0.78	-1.5
5,689,456	-		Psyr_4799	0.78	-0.7
5,689,456	-		Psyr_4799	0.78	+2.4
5,689,456	-		Psyr_4799	0.78	-0.1
5,689,461	-		Psyr_4799	0.78	-0.6
5,689,647	+				+0.1
5,689,647	+				+0.9
5,689,647	+				+0.1
5,689,647	+				-0.6
5,689,647	+				+0.9
5,689,647	+				+0.1
5,689,647	+				-1.0
5,689,648	-				-1.0
5,689,648	-				-0.4
5,689,648	-				+0.4
5,689,648	-				+0.3
5,689,648	-				-0.6
5,689,648	-				+3.3
5,689,648	-				+0.1
5,689,648	-				+0.1
5,689,648	-				-0.9
5,689,648	-				+0.4
5,689,648	-				-2.5
5,689,648	-				+0.0
5,689,648	-				+0.1
5,689,648	-				+0.5
5,689,648	-				+0.7
5,689,673	+				-1.0
5,689,674	-				+0.3
5,689,674	-				-1.9
5,689,674	-				+0.4
5,689,674	-				+1.1
5,689,674	-				+1.0
5,689,674	-				-0.2
5,689,674	-				+0.1
5,689,674	-				+0.3
5,689,676	-				-1.2
5,689,676	-				+0.4
5,689,676	-				-1.3
5,689,779	-				-1.6
5,690,145	+		Psyr_4800	0.57	+2.7
5,690,146	-		Psyr_4800	0.57	-0.1
5,690,146	-		Psyr_4800	0.57	-0.5
5,690,301	+		Psyr_4800	0.80	+0.9
5,690,301	+		Psyr_4800	0.80	+0.4
5,690,322	+		Psyr_4800	0.83	+0.5
5,690,322	+		Psyr_4800	0.83	-0.9
5,690,322	+		Psyr_4800	0.83	+0.1
5,690,322	+		Psyr_4800	0.83	-0.4
5,690,322	+		Psyr_4800	0.83	+0.5
5,690,322	+		Psyr_4800	0.83	+1.3
5,690,323	-		Psyr_4800	0.83	+0.7
5,690,323	-		Psyr_4800	0.83	+1.9
5,690,323	-		Psyr_4800	0.83	-0.7
5,690,323	-		Psyr_4800	0.83	+0.9
5,690,324	+		Psyr_4800	0.84	+0.5
5,690,325	-		Psyr_4800	0.84	+0.7
5,690,325	-		Psyr_4800	0.84	-0.9
5,690,325	-		Psyr_4800	0.84	-1.2
5,690,325	-		Psyr_4800	0.84	+0.5
5,690,391	+				+0.4
5,690,391	+				-0.3
5,690,391	+				-0.6
5,690,392	-				-0.9
5,690,392	-				-1.4
5,690,392	-				+1.6
5,690,392	-				+0.1
5,690,417	+				-1.5
5,690,418	-				+1.3
5,690,420	+				+0.3
5,690,420	+				+0.1
5,690,420	+				+0.5
5,690,421	-				+0.5
5,690,421	-				-0.4
5,690,421	-				+0.1
5,690,421	-				-0.2
5,690,483	+				-0.2
5,690,483	+				-1.1
5,690,484	-				+0.9
5,690,523	+				-1.5
5,690,546	+				+0.0
5,690,547	-				+1.6
5,690,560	+				+1.2
5,690,561	-				-2.2
5,690,561	-				-0.7
5,690,603	+				-0.9
5,690,604	-				+0.1
5,690,604	-				-1.0
5,690,604	-				-0.5
5,690,604	-				+0.7
5,690,604	-				+1.5
5,690,648	+				-0.7
5,690,648	+				+0.1
5,690,648	+				-1.5
5,690,648	+				+0.9
5,690,648	+				-1.7
5,690,649	-				+0.7
5,690,649	-				-0.1