Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4365 and Psyr_4366 are separated by 28 nucleotides Psyr_4366 and Psyr_4367 are separated by 9 nucleotides Psyr_4367 and Psyr_4368 are separated by 60 nucleotides Psyr_4368 and Psyr_4369 are separated by 13 nucleotides
Psyr_4365: Psyr_4365 - cell elongation-specific peptidoglycan D,D-transpeptidase / peptidoglycan glycosyltransferase, at 5,218,555 to 5,220,450
_4365
Psyr_4366: Psyr_4366 - Protein of unknown function DUF163, at 5,220,479 to 5,220,946
_4366
Psyr_4367: Psyr_4367 - Iojap-related protein, at 5,220,956 to 5,221,342
_4367
Psyr_4368: Psyr_4368 - nicotinate-nucleotide adenylyltransferase, at 5,221,403 to 5,222,071
_4368
Psyr_4369: Psyr_4369 - glutamate-5-semialdehyde dehydrogenase, at 5,222,085 to 5,223,350
_4369
Position (kb) 5221
5222
5223 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5220.453 kb on - strand at 5220.469 kb on - strand at 5220.469 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.481 kb on - strand at 5220.490 kb on - strand at 5220.523 kb on - strand at 5220.523 kb on - strand at 5220.958 kb on - strand at 5220.958 kb on - strand at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.222 kb on - strand, within Psyr_4367 at 5221.343 kb on - strand at 5221.343 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.345 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5221.363 kb on - strand at 5222.126 kb on - strand at 5222.126 kb on - strand at 5222.126 kb on - strand at 5222.126 kb on - strand at 5222.126 kb on - strand at 5222.178 kb on - strand at 5222.178 kb on - strand at 5222.178 kb on - strand at 5222.184 kb on - strand at 5222.184 kb on - strand at 5222.408 kb on - strand, within Psyr_4369 at 5222.588 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.648 kb on - strand, within Psyr_4369 at 5222.753 kb on - strand, within Psyr_4369 at 5222.975 kb on - strand, within Psyr_4369 at 5222.975 kb on - strand, within Psyr_4369 at 5222.975 kb on - strand, within Psyr_4369
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,220,453 - -0.4 5,220,469 - -0.3 5,220,469 - -1.0 5,220,481 - -2.6 5,220,481 - -0.0 5,220,481 - +0.4 5,220,481 - +0.2 5,220,481 - -1.0 5,220,481 - -0.6 5,220,481 - +1.1 5,220,481 - -0.3 5,220,481 - +0.8 5,220,490 - +1.2 5,220,523 - -1.0 5,220,523 - -1.1 5,220,958 - +0.1 5,220,958 - -1.0 5,221,222 - Psyr_4367 0.69 -1.4 5,221,222 - Psyr_4367 0.69 -0.2 5,221,222 - Psyr_4367 0.69 +0.3 5,221,222 - Psyr_4367 0.69 -0.4 5,221,222 - Psyr_4367 0.69 -1.4 5,221,222 - Psyr_4367 0.69 +0.8 5,221,222 - Psyr_4367 0.69 +1.0 5,221,222 - Psyr_4367 0.69 -0.0 5,221,222 - Psyr_4367 0.69 +0.5 5,221,343 - +0.8 5,221,343 - -0.0 5,221,345 - -0.3 5,221,345 - +0.9 5,221,345 - +0.9 5,221,345 - +1.5 5,221,345 - -1.6 5,221,345 - -3.5 5,221,345 - -1.1 5,221,345 - +0.8 5,221,363 - -2.4 5,221,363 - +0.5 5,221,363 - +0.1 5,221,363 - -1.2 5,221,363 - +0.5 5,221,363 - +2.8 5,221,363 - -1.4 5,222,126 - -2.6 5,222,126 - -2.0 5,222,126 - -2.3 5,222,126 - -2.8 5,222,126 - -3.8 5,222,178 - -1.0 5,222,178 - -3.8 5,222,178 - -3.0 5,222,184 - -3.5 5,222,184 - -3.0 5,222,408 - Psyr_4369 0.26 -2.8 5,222,588 - Psyr_4369 0.40 -0.0 5,222,648 - Psyr_4369 0.44 -3.6 5,222,648 - Psyr_4369 0.44 -3.3 5,222,648 - Psyr_4369 0.44 -1.6 5,222,648 - Psyr_4369 0.44 -3.7 5,222,648 - Psyr_4369 0.44 -2.3 5,222,648 - Psyr_4369 0.44 -2.0 5,222,648 - Psyr_4369 0.44 -0.0 5,222,648 - Psyr_4369 0.44 -4.3 5,222,648 - Psyr_4369 0.44 -3.5 5,222,648 - Psyr_4369 0.44 -1.6 5,222,648 - Psyr_4369 0.44 -2.2 5,222,753 - Psyr_4369 0.53 -2.8 5,222,975 - Psyr_4369 0.70 -1.0 5,222,975 - Psyr_4369 0.70 -3.3 5,222,975 - Psyr_4369 0.70 -2.5
Or see this region's nucleotide sequence