Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1482

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
1,669,801	-		Psyr_1480	0.46	+1.3
1,669,810	+		Psyr_1480	0.47	-0.1
1,669,909	+		Psyr_1480	0.64	+0.3
1,669,909	+		Psyr_1480	0.64	+2.2
1,669,909	+		Psyr_1480	0.64	-1.3
1,669,909	+		Psyr_1480	0.64	-0.6
1,669,910	-		Psyr_1480	0.64	+0.2
1,669,910	-		Psyr_1480	0.64	-0.3
1,669,910	-		Psyr_1480	0.64	+3.9
1,669,910	-		Psyr_1480	0.64	-1.0
1,669,910	-		Psyr_1480	0.64	-0.4
1,669,956	+		Psyr_1480	0.72	+0.5
1,669,956	+		Psyr_1480	0.72	+0.3
1,669,994	-		Psyr_1480	0.78	+0.5
1,669,999	-		Psyr_1480	0.79	-0.1
1,670,079	+				-1.1
1,670,079	+				-0.4
1,670,079	+				+2.1
1,670,080	-				+0.3
1,670,080	-				-0.6
1,670,080	-				+1.3
1,670,080	-				+1.3
1,670,080	-				+3.0
1,670,122	-				+0.7
1,670,127	+				+0.2
1,670,127	+				+1.9
1,670,127	+				+0.7
1,670,127	+				-0.0
1,670,128	-				-1.5
1,670,128	-				+0.1
1,670,128	-				+1.9
1,670,128	-				+0.3
1,670,155	-				+1.2
1,670,177	-				-0.1
1,670,237	+		Psyr_1481	0.20	+0.6
1,670,247	+		Psyr_1481	0.22	+0.5
1,670,247	+		Psyr_1481	0.22	-1.3
1,670,247	+		Psyr_1481	0.22	+0.4
1,670,248	-		Psyr_1481	0.22	+0.6
1,670,309	+		Psyr_1481	0.34	-0.8
1,670,309	+		Psyr_1481	0.34	-3.0
1,670,310	-		Psyr_1481	0.34	+0.7
1,670,310	-		Psyr_1481	0.34	+0.3
1,670,310	-		Psyr_1481	0.34	+1.0
1,670,310	-		Psyr_1481	0.34	+0.9
1,670,319	+		Psyr_1481	0.35	-1.8
1,670,319	+		Psyr_1481	0.35	-0.3
1,670,319	+		Psyr_1481	0.35	+1.5
1,670,319	+		Psyr_1481	0.35	+0.1
1,670,320	-		Psyr_1481	0.36	+0.7
1,670,320	-		Psyr_1481	0.36	+1.3
1,670,320	-		Psyr_1481	0.36	-0.4
1,670,320	-		Psyr_1481	0.36	+1.7
1,670,320	-		Psyr_1481	0.36	+0.6
1,670,320	-		Psyr_1481	0.36	+1.3
1,670,323	+		Psyr_1481	0.36	+0.2
1,670,323	+		Psyr_1481	0.36	+0.6
1,670,323	+		Psyr_1481	0.36	-0.6
1,670,324	-		Psyr_1481	0.36	+0.3
1,670,324	-		Psyr_1481	0.36	-0.6
1,670,324	-		Psyr_1481	0.36	-0.3
1,670,324	-		Psyr_1481	0.36	-1.1
1,670,324	-		Psyr_1481	0.36	-0.3
1,670,354	+		Psyr_1481	0.42	-2.1
1,670,354	+		Psyr_1481	0.42	+1.7
1,670,354	+		Psyr_1481	0.42	+0.2
1,670,355	-		Psyr_1481	0.42	+0.6
1,670,355	-		Psyr_1481	0.42	-0.7
1,670,355	-		Psyr_1481	0.42	+0.2
1,670,355	-		Psyr_1481	0.42	+0.2
1,670,388	+		Psyr_1481	0.48	-1.3
1,670,388	+		Psyr_1481	0.48	+0.2
1,670,388	+		Psyr_1481	0.48	+1.7
1,670,388	+		Psyr_1481	0.48	-0.3
1,670,388	+		Psyr_1481	0.48	-0.7
1,670,388	+		Psyr_1481	0.48	+0.9
1,670,388	+		Psyr_1481	0.48	+0.7
1,670,388	+		Psyr_1481	0.48	+1.1
1,670,388	+		Psyr_1481	0.48	-2.4
1,670,388	+		Psyr_1481	0.48	-0.3
1,670,388	+		Psyr_1481	0.48	-0.5
1,670,388	+		Psyr_1481	0.48	-1.7
1,670,388	+		Psyr_1481	0.48	-0.8
1,670,388	+		Psyr_1481	0.48	+0.3
1,670,388	+		Psyr_1481	0.48	+0.3
1,670,389	-		Psyr_1481	0.48	-0.5
1,670,389	-		Psyr_1481	0.48	-0.5
1,670,389	-		Psyr_1481	0.48	-3.1
1,670,389	-		Psyr_1481	0.48	-0.6
1,670,389	-		Psyr_1481	0.48	+0.2
1,670,389	-		Psyr_1481	0.48	+0.7
1,670,389	-		Psyr_1481	0.48	-0.3
1,670,389	-		Psyr_1481	0.48	+0.0
1,670,389	-		Psyr_1481	0.48	-0.9
1,670,389	-		Psyr_1481	0.48	+0.3
1,670,389	-		Psyr_1481	0.48	+0.5
1,670,389	-		Psyr_1481	0.48	+0.7
1,670,389	-		Psyr_1481	0.48	+3.1
1,670,389	-		Psyr_1481	0.48	-1.3
1,670,389	-		Psyr_1481	0.48	-0.1
1,670,399	+		Psyr_1481	0.50	-0.6
1,670,399	+		Psyr_1481	0.50	+0.4
1,670,400	-		Psyr_1481	0.50	-0.4
1,670,488	+		Psyr_1481	0.66	+1.6
1,670,488	+		Psyr_1481	0.66	+0.3
1,670,489	-		Psyr_1481	0.66	+1.1
1,670,489	-		Psyr_1481	0.66	-1.0
1,670,505	+		Psyr_1481	0.69	+0.4
1,670,505	+		Psyr_1481	0.69	-0.4
1,670,580	+		Psyr_1481	0.83	-1.8
1,670,580	+		Psyr_1481	0.83	-0.9
1,670,581	-		Psyr_1481	0.83	+0.2
1,670,581	-		Psyr_1481	0.83	-0.7
1,670,581	-		Psyr_1481	0.83	+0.8
1,670,581	-		Psyr_1481	0.83	+0.5
1,670,656	+				-0.3
1,670,664	+				-3.1
1,670,664	+				+2.7
1,670,664	+				+0.2
1,670,664	+				+0.1
1,670,665	-				-1.7
1,670,665	-				+1.1
1,670,665	-				+1.0
1,670,665	-				+1.6
1,670,677	+				+0.2
1,670,677	+				-3.1
1,670,677	+				+2.3
1,670,678	-				+0.1
1,670,678	-				-2.3
1,670,692	-				-1.0
1,670,729	+				+1.6
1,670,729	+				-0.3
1,670,729	+				+0.7
1,670,729	+				-1.3
1,670,729	+				+1.3
1,670,730	-				-1.0
1,670,730	-				-1.7
1,670,730	-				-1.3
1,670,730	-				-2.3
1,670,730	-				-1.8
1,670,730	-				+0.6
1,670,731	+				+1.1
1,670,731	+				+1.1
1,670,731	+				-1.0
1,670,731	+				-0.3
1,670,731	+				+2.6
1,670,731	+				-1.2
1,670,731	+				-1.3
1,670,732	-				-0.0
1,670,732	-				+3.1
1,670,732	-				+1.0
1,670,732	-				+0.1
1,670,732	-				+1.0
1,670,732	-				-0.5
1,670,732	-				+0.7
1,670,732	-				+0.1
1,670,732	-				+1.2
1,670,732	-				+0.6
1,670,732	-				+0.3
1,670,732	-				-1.6
1,670,732	-				-1.1
1,670,732	-				-0.1
1,670,732	-				-0.0
1,670,815	+				-0.0
1,670,815	+				+0.3
1,670,815	+				-0.1
1,670,816	-				-0.3
1,670,844	+				+0.0
1,670,863	+				+2.1
1,670,863	+				+3.1
1,670,863	+				-0.8
1,670,863	+				+0.1
1,670,864	-				-0.5
1,670,864	-				-1.3
1,670,864	-				+0.7
1,671,050	+		Psyr_1482	0.20	-0.2
1,671,050	+		Psyr_1482	0.20	+0.5
1,671,050	+		Psyr_1482	0.20	-0.7
1,671,051	-		Psyr_1482	0.21	+0.5
1,671,051	-		Psyr_1482	0.21	-0.4
1,671,051	-		Psyr_1482	0.21	+1.5
1,671,063	+		Psyr_1482	0.21	+0.8
1,671,123	+		Psyr_1482	0.26	-0.4
1,671,123	+		Psyr_1482	0.26	-0.6
1,671,123	+		Psyr_1482	0.26	+1.7
1,671,123	+		Psyr_1482	0.26	-1.6
1,671,123	+		Psyr_1482	0.26	-0.4
1,671,123	+		Psyr_1482	0.26	-0.7
1,671,123	+		Psyr_1482	0.26	+0.7
1,671,123	+		Psyr_1482	0.26	+0.5
1,671,123	+		Psyr_1482	0.26	+0.6
1,671,124	-		Psyr_1482	0.26	+0.7
1,671,124	-		Psyr_1482	0.26	-1.0
1,671,124	-		Psyr_1482	0.26	+0.4
1,671,172	-		Psyr_1482	0.30	-1.0
1,671,172	-		Psyr_1482	0.30	-0.3
1,671,172	-		Psyr_1482	0.30	-0.3
1,671,229	+		Psyr_1482	0.34	-0.5
1,671,250	+		Psyr_1482	0.36	+1.6
1,671,251	-		Psyr_1482	0.36	-0.6
1,671,251	-		Psyr_1482	0.36	-0.3
1,671,258	-		Psyr_1482	0.37	+0.9
1,671,281	+		Psyr_1482	0.38	+0.5
1,671,282	-		Psyr_1482	0.39	-0.4
1,671,304	+		Psyr_1482	0.40	+0.9
1,671,304	+		Psyr_1482	0.40	+0.9
1,671,319	+		Psyr_1482	0.41	-2.6
1,671,319	+		Psyr_1482	0.41	+0.7
1,671,320	-		Psyr_1482	0.42	+0.7
1,671,374	-		Psyr_1482	0.46	-0.3
1,671,486	-		Psyr_1482	0.54	-2.1
1,671,508	+		Psyr_1482	0.56	+0.0
1,671,509	-		Psyr_1482	0.56	-0.7
1,671,557	+		Psyr_1482	0.60	+1.7
1,671,557	+		Psyr_1482	0.60	+0.0
1,671,557	+		Psyr_1482	0.60	+0.6
1,671,557	+		Psyr_1482	0.60	+0.6
1,671,558	-		Psyr_1482	0.60	+0.5
1,671,624	-		Psyr_1482	0.65	+1.1
1,671,671	-		Psyr_1482	0.69	+1.2
1,671,671	-		Psyr_1482	0.69	+0.5
1,671,782	+		Psyr_1482	0.77	+0.1
1,671,782	+		Psyr_1482	0.77	-0.5
1,671,783	-		Psyr_1482	0.78	-0.6
1,671,843	+		Psyr_1482	0.82	-1.0
1,671,843	+		Psyr_1482	0.82	+0.2
1,671,843	+		Psyr_1482	0.82	+1.7
1,671,843	+		Psyr_1482	0.82	+2.1
1,671,844	-		Psyr_1482	0.82	+0.6
1,671,844	-		Psyr_1482	0.82	-0.1
1,671,874	-		Psyr_1482	0.85	-0.8
1,671,902	+		Psyr_1482	0.87	-0.2
1,671,903	-		Psyr_1482	0.87	-2.1
1,671,903	-		Psyr_1482	0.87	-0.7
1,671,941	+		Psyr_1482	0.90	+0.7
1,672,010	+				+0.7
1,672,133	+				+1.1
1,672,133	+				-0.1
1,672,133	+				-0.3
1,672,133	+				-0.4
1,672,133	+				+0.6
1,672,133	+				+0.5
1,672,134	-				-0.8
1,672,134	-				+0.9
1,672,134	-				+0.7
1,672,134	-				+1.0
1,672,134	-				-0.6
1,672,134	-				+0.0
1,672,134	-				+0.4
1,672,134	-				-0.3
1,672,134	-				-0.3
1,672,134	-				+2.1
1,672,160	-				-0.7
1,672,215	+				-0.4
1,672,215	+				-0.3
1,672,219	+				+0.7
1,672,219	+				-1.4
1,672,219	+				-0.3
1,672,220	-				+0.4
1,672,220	-				+0.1
1,672,220	-				+0.1
1,672,307	-				+1.4
1,672,336	+				+1.1
1,672,336	+				+0.2
1,672,337	-				-1.3
1,672,357	+				-0.7
1,672,358	-				-1.3
1,672,358	-				-0.4
1,672,393	+				-0.7
1,672,418	+				+0.2
1,672,419	-				+0.6
1,672,419	-				+0.7
1,672,419	-				+0.8
1,672,419	-				-2.3
1,672,459	+				+1.0
1,672,503	+				+0.3
1,672,628	+		Psyr_1483	0.18	-1.3
1,672,629	-		Psyr_1483	0.18	+0.3
1,672,660	+		Psyr_1483	0.30	+1.4
1,672,661	-		Psyr_1483	0.30	+2.1
1,672,661	-		Psyr_1483	0.30	+1.9
1,672,674	-		Psyr_1483	0.35	-0.8
1,672,701	+		Psyr_1483	0.45	+1.7
1,672,702	-		Psyr_1483	0.46	-1.4
1,672,702	-		Psyr_1483	0.46	+0.1
1,672,773	-		Psyr_1483	0.72	+1.0
1,672,826	+				+0.7
1,672,826	+				+1.0
1,672,826	+				-0.3
1,672,826	+				+1.3
1,672,826	+				-0.7
1,672,826	+				+1.7
1,672,827	-				+1.7
1,672,827	-				+1.3
1,672,827	-				+2.1
1,672,827	-				-1.3
1,672,827	-				-0.3
1,672,832	-				+0.7
1,672,833	+				+0.8
1,672,834	-				+0.3
1,672,842	+				+0.6
1,672,843	-				-0.8
1,672,918	-				+0.7
1,672,938	+		Psyr_1484	0.15	+0.7
1,672,938	+		Psyr_1484	0.15	+0.5
1,672,938	+		Psyr_1484	0.15	-0.8
1,672,938	+		Psyr_1484	0.15	+1.1
1,672,938	+		Psyr_1484	0.15	+0.1
1,672,938	+		Psyr_1484	0.15	+0.1
1,672,938	+		Psyr_1484	0.15	+2.1
1,672,938	+		Psyr_1484	0.15	+1.6
1,672,938	+		Psyr_1484	0.15	+2.8
1,672,938	+		Psyr_1484	0.15	-2.6
1,672,939	-		Psyr_1484	0.15	+1.3
1,672,939	-		Psyr_1484	0.15	-0.4
1,672,939	-		Psyr_1484	0.15	+1.6
1,672,939	-		Psyr_1484	0.15	-1.7
1,672,939	-		Psyr_1484	0.15	+0.9
1,672,939	-		Psyr_1484	0.15	+1.3
1,672,939	-		Psyr_1484	0.15	-1.1
1,672,939	-		Psyr_1484	0.15	+1.3
1,672,939	-		Psyr_1484	0.15	+0.3
1,672,939	-		Psyr_1484	0.15	-0.3
1,673,007	-		Psyr_1484	0.36	+1.3
1,673,008	+		Psyr_1484	0.37	-0.5
1,673,008	+		Psyr_1484	0.37	-0.5
1,673,008	+		Psyr_1484	0.37	-1.0
1,673,008	+		Psyr_1484	0.37	+0.7
1,673,008	+		Psyr_1484	0.37	-0.4
1,673,008	+		Psyr_1484	0.37	+0.7
1,673,008	+		Psyr_1484	0.37	+2.3
1,673,009	-		Psyr_1484	0.37	+1.7
1,673,009	-		Psyr_1484	0.37	+2.8
1,673,009	-		Psyr_1484	0.37	+0.6
1,673,009	-		Psyr_1484	0.37	+0.3