Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0652 and Psyr_0653 are separated by 432 nucleotides Psyr_0653 and Psyr_0654 overlap by 4 nucleotides Psyr_0654 and Psyr_0655 are separated by 69 nucleotides Psyr_0655 and Psyr_0656 are separated by 164 nucleotides Psyr_0656 and Psyr_0657 are separated by 138 nucleotides
Psyr_0652: Psyr_0652 - Integrase, catalytic region, at 740,007 to 740,789
_0652
Psyr_0653: Psyr_0653 - transcriptional regulator, MerR family, at 741,222 to 741,620
_0653
Psyr_0654: Psyr_0654 - Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 741,617 to 743,815
_0654
Psyr_0655: Psyr_0655 - conserved domain protein, at 743,885 to 744,265
_0655
Psyr_0656: Psyr_0656 - Heavy metal transport/detoxification protein, at 744,430 to 744,627
_0656
Psyr_0657: Psyr_0657 - Drug resistance transporter Bcr/CflA subfamily, at 744,766 to 745,962
_0657
Position (kb) 741
742
743
744 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.794 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.796 kb on + strand at 740.852 kb on - strand at 740.923 kb on + strand at 740.923 kb on + strand at 740.923 kb on + strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.924 kb on - strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.927 kb on + strand at 740.928 kb on - strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.967 kb on + strand at 740.968 kb on - strand at 740.968 kb on - strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.107 kb on + strand at 741.505 kb on + strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.506 kb on - strand, within Psyr_0653 at 741.563 kb on - strand, within Psyr_0653 at 741.563 kb on - strand, within Psyr_0653 at 741.565 kb on + strand, within Psyr_0653 at 741.566 kb on - strand, within Psyr_0653 at 741.729 kb on + strand at 741.729 kb on + strand at 741.765 kb on + strand at 741.766 kb on - strand at 741.766 kb on - strand at 741.766 kb on - strand at 741.766 kb on - strand at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.046 kb on + strand, within Psyr_0654 at 742.047 kb on - strand, within Psyr_0654 at 742.047 kb on - strand, within Psyr_0654 at 742.183 kb on + strand, within Psyr_0654 at 742.184 kb on - strand at 742.184 kb on - strand, within Psyr_0654 at 742.184 kb on - strand, within Psyr_0654 at 742.184 kb on - strand, within Psyr_0654 at 743.217 kb on + strand, within Psyr_0654 at 743.218 kb on - strand, within Psyr_0654 at 743.218 kb on - strand, within Psyr_0654 at 743.218 kb on - strand, within Psyr_0654 at 743.218 kb on - strand, within Psyr_0654 at 743.231 kb on + strand, within Psyr_0654 at 743.231 kb on + strand, within Psyr_0654 at 743.231 kb on + strand, within Psyr_0654 at 743.232 kb on - strand, within Psyr_0654 at 743.232 kb on - strand, within Psyr_0654 at 743.266 kb on - strand, within Psyr_0654 at 743.266 kb on - strand, within Psyr_0654 at 743.295 kb on + strand, within Psyr_0654 at 743.295 kb on + strand, within Psyr_0654 at 743.295 kb on + strand, within Psyr_0654 at 743.296 kb on - strand, within Psyr_0654 at 743.296 kb on - strand, within Psyr_0654 at 743.307 kb on + strand, within Psyr_0654 at 743.360 kb on - strand, within Psyr_0654 at 743.400 kb on + strand, within Psyr_0654 at 743.615 kb on - strand at 743.675 kb on + strand at 743.675 kb on + strand at 743.675 kb on + strand at 743.675 kb on + strand at 743.676 kb on - strand at 743.676 kb on - strand at 743.676 kb on - strand at 743.676 kb on - strand at 743.839 kb on + strand at 743.889 kb on + strand at 743.889 kb on + strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.914 kb on - strand at 743.914 kb on - strand at 743.914 kb on - strand at 743.943 kb on + strand, within Psyr_0655 at 743.943 kb on + strand, within Psyr_0655 at 743.944 kb on - strand, within Psyr_0655 at 743.954 kb on - strand, within Psyr_0655 at 744.093 kb on + strand, within Psyr_0655 at 744.094 kb on - strand, within Psyr_0655 at 744.094 kb on - strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.217 kb on + strand, within Psyr_0655 at 744.273 kb on - strand at 744.273 kb on - strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.438 kb on - strand at 744.438 kb on - strand at 744.666 kb on - strand at 744.687 kb on + strand at 744.687 kb on + strand at 744.688 kb on - strand at 744.688 kb on - strand at 744.732 kb on - strand at 744.773 kb on + strand at 744.773 kb on + strand at 744.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 740,794 + -2.0 740,794 + -0.5 740,794 + +0.0 740,794 + +1.3 740,794 + +0.8 740,794 + +1.0 740,794 + +3.0 740,796 + +1.0 740,796 + +0.6 740,796 + -1.6 740,796 + +3.0 740,796 + +0.3 740,796 + -0.3 740,796 + +0.5 740,796 + +0.8 740,852 - -0.3 740,923 + +2.4 740,923 + +1.0 740,923 + +0.2 740,924 - -1.5 740,924 - -0.7 740,924 - +0.7 740,924 - +0.8 740,924 - -1.0 740,924 - -1.1 740,924 - +0.5 740,927 + +1.0 740,927 + -0.3 740,927 + -0.2 740,927 + -0.4 740,927 + -0.7 740,928 - +1.9 740,967 + +0.2 740,967 + +0.2 740,967 + +0.3 740,967 + -0.4 740,967 + -0.5 740,967 + +0.6 740,967 + -2.0 740,968 - -0.1 740,968 - +0.0 741,107 + +0.0 741,107 + +1.8 741,107 + -0.2 741,107 + -0.2 741,107 + +1.2 741,107 + -0.9 741,107 + -0.2 741,505 + Psyr_0653 0.71 +0.5 741,506 - Psyr_0653 0.71 +0.3 741,506 - Psyr_0653 0.71 -0.6 741,506 - Psyr_0653 0.71 -0.1 741,563 - Psyr_0653 0.85 -0.8 741,563 - Psyr_0653 0.85 -0.0 741,565 + Psyr_0653 0.86 -1.4 741,566 - Psyr_0653 0.86 +1.4 741,729 + -2.1 741,729 + +0.0 741,765 + +0.0 741,766 - -0.4 741,766 - -3.1 741,766 - -1.5 741,766 - -2.8 742,046 + Psyr_0654 0.20 +0.6 742,046 + Psyr_0654 0.20 -1.0 742,046 + Psyr_0654 0.20 -0.4 742,046 + Psyr_0654 0.20 -1.4 742,046 + Psyr_0654 0.20 -2.0 742,047 - Psyr_0654 0.20 -0.4 742,047 - Psyr_0654 0.20 -0.6 742,183 + Psyr_0654 0.26 -1.5 742,184 - -0.5 742,184 - Psyr_0654 0.26 -1.5 742,184 - Psyr_0654 0.26 -0.7 742,184 - Psyr_0654 0.26 -1.2 743,217 + Psyr_0654 0.73 +0.7 743,218 - Psyr_0654 0.73 -0.5 743,218 - Psyr_0654 0.73 +0.3 743,218 - Psyr_0654 0.73 -0.4 743,218 - Psyr_0654 0.73 +0.6 743,231 + Psyr_0654 0.73 -0.1 743,231 + Psyr_0654 0.73 -1.5 743,231 + Psyr_0654 0.73 +0.8 743,232 - Psyr_0654 0.73 +0.0 743,232 - Psyr_0654 0.73 -1.5 743,266 - Psyr_0654 0.75 -0.3 743,266 - Psyr_0654 0.75 +2.5 743,295 + Psyr_0654 0.76 -2.0 743,295 + Psyr_0654 0.76 -1.0 743,295 + Psyr_0654 0.76 -0.7 743,296 - Psyr_0654 0.76 -0.6 743,296 - Psyr_0654 0.76 +0.9 743,307 + Psyr_0654 0.77 -0.8 743,360 - Psyr_0654 0.79 -1.0 743,400 + Psyr_0654 0.81 +0.0 743,615 - -0.3 743,675 + -0.8 743,675 + -0.4 743,675 + -1.0 743,675 + -0.5 743,676 - -0.5 743,676 - -1.1 743,676 - -1.2 743,676 - -1.2 743,839 + +0.8 743,889 + +0.0 743,889 + -0.5 743,890 - -0.4 743,890 - +0.2 743,890 - -0.7 743,890 - -0.4 743,913 + +0.2 743,913 + +0.5 743,913 + +0.5 743,913 + +1.2 743,913 + +1.4 743,913 + -1.0 743,913 + -0.7 743,913 + +0.5 743,913 + +0.0 743,914 - -1.0 743,914 - -0.8 743,914 - -0.5 743,943 + Psyr_0655 0.15 +0.6 743,943 + Psyr_0655 0.15 +0.2 743,944 - Psyr_0655 0.15 +1.0 743,954 - Psyr_0655 0.18 +1.8 744,093 + Psyr_0655 0.55 -1.0 744,094 - Psyr_0655 0.55 +0.8 744,094 - Psyr_0655 0.55 -2.0 744,123 + Psyr_0655 0.62 +0.0 744,123 + Psyr_0655 0.62 +0.8 744,123 + Psyr_0655 0.62 +1.6 744,123 + Psyr_0655 0.62 +0.1 744,123 + Psyr_0655 0.62 +0.6 744,124 - Psyr_0655 0.63 -1.0 744,124 - Psyr_0655 0.63 +1.3 744,124 - Psyr_0655 0.63 -0.8 744,124 - Psyr_0655 0.63 +0.0 744,124 - Psyr_0655 0.63 +0.4 744,124 - Psyr_0655 0.63 +0.7 744,124 - Psyr_0655 0.63 +1.6 744,217 + Psyr_0655 0.87 +0.3 744,273 - -0.5 744,273 - +0.0 744,283 + -0.2 744,283 + -0.2 744,283 + -3.0 744,283 + +0.5 744,283 + +0.6 744,283 + -0.6 744,284 - +0.8 744,284 - -0.3 744,284 - +0.6 744,284 - +0.9 744,301 + +2.4 744,301 + -1.8 744,301 + +0.8 744,301 + -0.4 744,301 + +2.6 744,301 + -2.5 744,301 + -1.0 744,301 + +1.6 744,301 + -0.7 744,301 + +0.9 744,301 + +0.3 744,301 + +1.8 744,301 + -0.4 744,302 - +1.0 744,302 - -0.7 744,302 - -0.1 744,302 - -0.4 744,302 - +1.0 744,302 - +0.8 744,302 - +0.5 744,302 - +0.3 744,302 - +0.6 744,302 - +1.2 744,438 - -1.0 744,438 - +1.5 744,666 - +0.6 744,687 + +0.1 744,687 + +0.3 744,688 - +0.2 744,688 - +3.0 744,732 - +1.0 744,773 + +0.4 744,773 + -1.1 744,774 - +1.8
Or see this region's nucleotide sequence