Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20495 and IAI47_20500 are separated by 187 nucleotides IAI47_20500 and IAI47_20505 are separated by 6 nucleotides IAI47_20505 and IAI47_20510 are separated by 499 nucleotides
IAI47_20495: IAI47_20495 - 4-alpha-glucanotransferase, at 347,278 to 349,353
_20495
IAI47_20500: IAI47_20500 - type II toxin-antitoxin system YhaV family toxin, at 349,541 to 350,011
_20500
IAI47_20505: IAI47_20505 - type II toxin-antitoxin system PrlF family antitoxin, at 350,018 to 350,362
_20505
IAI47_20510: IAI47_20510 - maltose operon protein MalM, at 350,862 to 351,800
_20510
Position (kb) 350
351 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 349.101 kb on + strand, within IAI47_20495 at 349.102 kb on - strand, within IAI47_20495 at 349.108 kb on - strand, within IAI47_20495 at 349.122 kb on - strand, within IAI47_20495 at 349.122 kb on - strand, within IAI47_20495 at 349.141 kb on + strand, within IAI47_20495 at 349.141 kb on + strand, within IAI47_20495 at 349.141 kb on + strand, within IAI47_20495 at 349.142 kb on - strand, within IAI47_20495 at 349.142 kb on - strand, within IAI47_20495 at 349.198 kb on - strand at 349.237 kb on + strand at 349.287 kb on + strand at 349.288 kb on - strand at 349.412 kb on + strand at 349.412 kb on + strand at 349.412 kb on + strand at 349.415 kb on + strand at 349.415 kb on + strand at 349.416 kb on - strand at 349.450 kb on + strand at 349.450 kb on + strand at 349.450 kb on + strand at 349.451 kb on - strand at 349.451 kb on - strand at 349.451 kb on - strand at 349.483 kb on + strand at 349.484 kb on - strand at 349.533 kb on + strand at 349.533 kb on + strand at 349.533 kb on + strand at 349.533 kb on + strand at 349.534 kb on - strand at 349.542 kb on + strand at 349.542 kb on + strand at 349.542 kb on + strand at 349.552 kb on + strand at 349.552 kb on + strand at 349.552 kb on + strand at 349.553 kb on - strand at 349.553 kb on - strand at 349.553 kb on - strand at 349.631 kb on + strand, within IAI47_20500 at 349.637 kb on - strand, within IAI47_20500 at 349.637 kb on - strand, within IAI47_20500 at 349.637 kb on - strand, within IAI47_20500 at 349.638 kb on + strand, within IAI47_20500 at 349.638 kb on + strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.639 kb on - strand, within IAI47_20500 at 349.651 kb on + strand, within IAI47_20500 at 349.659 kb on + strand, within IAI47_20500 at 349.660 kb on - strand, within IAI47_20500 at 349.660 kb on - strand, within IAI47_20500 at 349.708 kb on + strand, within IAI47_20500 at 349.708 kb on + strand, within IAI47_20500 at 349.708 kb on + strand, within IAI47_20500 at 349.709 kb on - strand, within IAI47_20500 at 349.709 kb on - strand, within IAI47_20500 at 349.709 kb on - strand, within IAI47_20500 at 349.709 kb on - strand, within IAI47_20500 at 349.726 kb on + strand, within IAI47_20500 at 349.727 kb on - strand, within IAI47_20500 at 349.727 kb on - strand, within IAI47_20500 at 349.740 kb on + strand, within IAI47_20500 at 349.793 kb on - strand, within IAI47_20500 at 349.840 kb on + strand, within IAI47_20500 at 349.840 kb on + strand, within IAI47_20500 at 349.846 kb on + strand, within IAI47_20500 at 349.853 kb on - strand, within IAI47_20500 at 349.874 kb on - strand, within IAI47_20500 at 349.874 kb on - strand, within IAI47_20500 at 349.874 kb on - strand, within IAI47_20500 at 349.905 kb on + strand, within IAI47_20500 at 349.905 kb on + strand, within IAI47_20500 at 349.910 kb on - strand, within IAI47_20500 at 349.974 kb on + strand at 349.974 kb on + strand at 349.974 kb on + strand at 349.975 kb on - strand at 349.975 kb on - strand at 349.975 kb on - strand at 349.975 kb on - strand at 349.975 kb on - strand at 349.975 kb on - strand at 349.993 kb on + strand at 350.011 kb on + strand at 350.012 kb on - strand at 350.012 kb on - strand at 350.019 kb on + strand at 350.019 kb on + strand at 350.020 kb on - strand at 350.020 kb on - strand at 350.020 kb on - strand at 350.020 kb on - strand at 350.059 kb on + strand, within IAI47_20505 at 350.059 kb on + strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.060 kb on - strand, within IAI47_20505 at 350.078 kb on - strand, within IAI47_20505 at 350.078 kb on - strand, within IAI47_20505 at 350.078 kb on - strand, within IAI47_20505 at 350.078 kb on - strand, within IAI47_20505 at 350.088 kb on - strand, within IAI47_20505 at 350.088 kb on - strand, within IAI47_20505 at 350.090 kb on + strand, within IAI47_20505 at 350.091 kb on - strand, within IAI47_20505 at 350.091 kb on - strand, within IAI47_20505 at 350.134 kb on + strand, within IAI47_20505 at 350.135 kb on - strand, within IAI47_20505 at 350.135 kb on - strand, within IAI47_20505 at 350.135 kb on - strand, within IAI47_20505 at 350.206 kb on + strand, within IAI47_20505 at 350.207 kb on - strand, within IAI47_20505 at 350.236 kb on - strand, within IAI47_20505 at 350.236 kb on - strand, within IAI47_20505 at 350.242 kb on + strand, within IAI47_20505 at 350.323 kb on + strand, within IAI47_20505 at 350.324 kb on - strand, within IAI47_20505 at 350.324 kb on - strand, within IAI47_20505 at 350.345 kb on - strand at 350.345 kb on - strand at 350.385 kb on + strand at 350.386 kb on - strand at 350.390 kb on + strand at 350.390 kb on + strand at 350.390 kb on + strand at 350.460 kb on - strand at 350.474 kb on - strand at 350.474 kb on - strand at 350.487 kb on + strand at 350.487 kb on + strand at 350.488 kb on - strand at 350.488 kb on - strand at 350.488 kb on - strand at 350.526 kb on + strand at 350.526 kb on + strand at 350.526 kb on + strand at 350.527 kb on - strand at 350.540 kb on + strand at 350.540 kb on + strand at 350.561 kb on + strand at 350.562 kb on - strand at 350.562 kb on - strand at 350.562 kb on - strand at 350.579 kb on + strand at 350.595 kb on - strand at 350.595 kb on - strand at 350.642 kb on - strand at 350.664 kb on + strand at 350.665 kb on - strand at 350.665 kb on - strand at 350.665 kb on - strand at 350.712 kb on + strand at 350.713 kb on - strand at 350.717 kb on + strand at 350.717 kb on + strand at 350.718 kb on - strand at 350.718 kb on - strand at 350.718 kb on - strand at 350.718 kb on - strand at 350.718 kb on - strand at 350.718 kb on - strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.719 kb on + strand at 350.720 kb on - strand at 350.720 kb on - strand at 350.720 kb on - strand at 350.720 kb on - strand at 350.720 kb on - strand at 350.720 kb on - strand at 350.733 kb on + strand at 350.733 kb on + strand at 350.734 kb on - strand at 350.752 kb on + strand at 350.753 kb on - strand at 350.764 kb on - strand at 350.764 kb on - strand at 350.846 kb on + strand at 350.883 kb on - strand at 350.883 kb on - strand at 350.888 kb on + strand at 350.889 kb on - strand at 350.889 kb on - strand at 350.889 kb on - strand at 350.993 kb on + strand, within IAI47_20510 at 350.998 kb on + strand, within IAI47_20510 at 350.998 kb on + strand, within IAI47_20510 at 350.999 kb on - strand, within IAI47_20510 at 350.999 kb on - strand, within IAI47_20510 at 351.082 kb on + strand, within IAI47_20510 at 351.101 kb on + strand, within IAI47_20510 at 351.102 kb on - strand, within IAI47_20510 at 351.234 kb on - strand, within IAI47_20510 at 351.266 kb on - strand, within IAI47_20510 at 351.266 kb on - strand, within IAI47_20510 at 351.324 kb on + strand, within IAI47_20510 at 351.324 kb on + strand, within IAI47_20510 at 351.324 kb on + strand, within IAI47_20510 at 351.325 kb on - strand, within IAI47_20510 at 351.325 kb on - strand, within IAI47_20510
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 remove 349,101 + IAI47_20495 0.88 +1.8 349,102 - IAI47_20495 0.88 -0.0 349,108 - IAI47_20495 0.88 -1.6 349,122 - IAI47_20495 0.89 +1.2 349,122 - IAI47_20495 0.89 -0.0 349,141 + IAI47_20495 0.90 +0.5 349,141 + IAI47_20495 0.90 +0.2 349,141 + IAI47_20495 0.90 +2.0 349,142 - IAI47_20495 0.90 -0.8 349,142 - IAI47_20495 0.90 -0.2 349,198 - -0.2 349,237 + +0.4 349,287 + -0.8 349,288 - +1.1 349,412 + +2.0 349,412 + +0.3 349,412 + +0.4 349,415 + +0.1 349,415 + +1.4 349,416 - +0.9 349,450 + +0.4 349,450 + +1.8 349,450 + +0.5 349,451 - +1.3 349,451 - +1.2 349,451 - +0.4 349,483 + -0.4 349,484 - +2.4 349,533 + -2.6 349,533 + -0.0 349,533 + -0.6 349,533 + -0.4 349,534 - +1.8 349,542 + -1.8 349,542 + +0.4 349,542 + -0.2 349,552 + -1.1 349,552 + -1.1 349,552 + -2.2 349,553 - -0.6 349,553 - +2.2 349,553 - +1.1 349,631 + IAI47_20500 0.19 +0.1 349,637 - IAI47_20500 0.20 +0.6 349,637 - IAI47_20500 0.20 +1.2 349,637 - IAI47_20500 0.20 +0.3 349,638 + IAI47_20500 0.21 -0.7 349,638 + IAI47_20500 0.21 +2.4 349,639 - IAI47_20500 0.21 +0.6 349,639 - IAI47_20500 0.21 +1.5 349,639 - IAI47_20500 0.21 +1.3 349,639 - IAI47_20500 0.21 +0.6 349,639 - IAI47_20500 0.21 +0.7 349,639 - IAI47_20500 0.21 +0.4 349,639 - IAI47_20500 0.21 +0.1 349,651 + IAI47_20500 0.23 +1.6 349,659 + IAI47_20500 0.25 +0.6 349,660 - IAI47_20500 0.25 +0.8 349,660 - IAI47_20500 0.25 +2.4 349,708 + IAI47_20500 0.35 +1.1 349,708 + IAI47_20500 0.35 +1.8 349,708 + IAI47_20500 0.35 -2.1 349,709 - IAI47_20500 0.36 +2.0 349,709 - IAI47_20500 0.36 +1.6 349,709 - IAI47_20500 0.36 +2.2 349,709 - IAI47_20500 0.36 +2.4 349,726 + IAI47_20500 0.39 -1.1 349,727 - IAI47_20500 0.39 +0.6 349,727 - IAI47_20500 0.39 +0.6 349,740 + IAI47_20500 0.42 -1.2 349,793 - IAI47_20500 0.54 +2.8 349,840 + IAI47_20500 0.63 -0.4 349,840 + IAI47_20500 0.63 -0.2 349,846 + IAI47_20500 0.65 +0.1 349,853 - IAI47_20500 0.66 +2.3 349,874 - IAI47_20500 0.71 +2.2 349,874 - IAI47_20500 0.71 +2.4 349,874 - IAI47_20500 0.71 +1.8 349,905 + IAI47_20500 0.77 +0.2 349,905 + IAI47_20500 0.77 +1.8 349,910 - IAI47_20500 0.78 +5.9 349,974 + -0.6 349,974 + -0.0 349,974 + -1.4 349,975 - +1.9 349,975 - +3.4 349,975 - +2.6 349,975 - +1.8 349,975 - +1.5 349,975 - +1.9 349,993 + +0.1 350,011 + +1.4 350,012 - -0.3 350,012 - +1.1 350,019 + -0.3 350,019 + -0.2 350,020 - +1.6 350,020 - +0.7 350,020 - +2.5 350,020 - +1.7 350,059 + IAI47_20505 0.12 -0.3 350,059 + IAI47_20505 0.12 -0.7 350,060 - IAI47_20505 0.12 +4.3 350,060 - IAI47_20505 0.12 +2.4 350,060 - IAI47_20505 0.12 +1.9 350,060 - IAI47_20505 0.12 +1.9 350,060 - IAI47_20505 0.12 +2.5 350,060 - IAI47_20505 0.12 +2.1 350,060 - IAI47_20505 0.12 +1.0 350,060 - IAI47_20505 0.12 +2.4 350,060 - IAI47_20505 0.12 +2.5 350,060 - IAI47_20505 0.12 +0.6 350,060 - IAI47_20505 0.12 +1.9 350,060 - IAI47_20505 0.12 +2.3 350,060 - IAI47_20505 0.12 +3.5 350,078 - IAI47_20505 0.17 +2.9 350,078 - IAI47_20505 0.17 +2.0 350,078 - IAI47_20505 0.17 +3.9 350,078 - IAI47_20505 0.17 +2.6 350,088 - IAI47_20505 0.20 +2.1 350,088 - IAI47_20505 0.20 +1.8 350,090 + IAI47_20505 0.21 +0.3 350,091 - IAI47_20505 0.21 +2.9 350,091 - IAI47_20505 0.21 +1.7 350,134 + IAI47_20505 0.34 -0.2 350,135 - IAI47_20505 0.34 +2.6 350,135 - IAI47_20505 0.34 +5.1 350,135 - IAI47_20505 0.34 +2.5 350,206 + IAI47_20505 0.54 -2.2 350,207 - IAI47_20505 0.55 +0.3 350,236 - IAI47_20505 0.63 +1.1 350,236 - IAI47_20505 0.63 +3.0 350,242 + IAI47_20505 0.65 -1.0 350,323 + IAI47_20505 0.88 -0.1 350,324 - IAI47_20505 0.89 +3.0 350,324 - IAI47_20505 0.89 +1.2 350,345 - +5.5 350,345 - +2.8 350,385 + -0.8 350,386 - -0.6 350,390 + -0.5 350,390 + -0.5 350,390 + +0.2 350,460 - -0.4 350,474 - +0.7 350,474 - +0.4 350,487 + -1.5 350,487 + -1.8 350,488 - -0.3 350,488 - -0.3 350,488 - -0.2 350,526 + -0.8 350,526 + +0.2 350,526 + -1.1 350,527 - -1.2 350,540 + +0.4 350,540 + -0.1 350,561 + -0.4 350,562 - +1.1 350,562 - -0.5 350,562 - -0.2 350,579 + +2.6 350,595 - +0.8 350,595 - -0.5 350,642 - +0.9 350,664 + -1.9 350,665 - +1.7 350,665 - +1.5 350,665 - +1.4 350,712 + -0.4 350,713 - +1.5 350,717 + -0.2 350,717 + +0.8 350,718 - +1.8 350,718 - -0.4 350,718 - -0.1 350,718 - -0.1 350,718 - +0.2 350,718 - +2.9 350,719 + +1.2 350,719 + -0.5 350,719 + -0.3 350,719 + -0.6 350,719 + +0.6 350,719 + +0.3 350,719 + -1.2 350,719 + +3.4 350,719 + -0.6 350,719 + -0.2 350,719 + -0.5 350,719 + +1.0 350,720 - +2.0 350,720 - -0.4 350,720 - +0.5 350,720 - +1.0 350,720 - +0.4 350,720 - -1.1 350,733 + +0.9 350,733 + -0.2 350,734 - +0.7 350,752 + +3.4 350,753 - -1.1 350,764 - +0.4 350,764 - +0.8 350,846 + -0.1 350,883 - +2.0 350,883 - +0.7 350,888 + +0.8 350,889 - +1.9 350,889 - +1.2 350,889 - +0.8 350,993 + IAI47_20510 0.14 +1.6 350,998 + IAI47_20510 0.14 +0.1 350,998 + IAI47_20510 0.14 -0.1 350,999 - IAI47_20510 0.15 +0.4 350,999 - IAI47_20510 0.15 +2.4 351,082 + IAI47_20510 0.23 +0.2 351,101 + IAI47_20510 0.25 +0.4 351,102 - IAI47_20510 0.26 -0.2 351,234 - IAI47_20510 0.40 +1.2 351,266 - IAI47_20510 0.43 +0.7 351,266 - IAI47_20510 0.43 -0.2 351,324 + IAI47_20510 0.49 -0.2 351,324 + IAI47_20510 0.49 +0.0 351,324 + IAI47_20510 0.49 +1.8 351,325 - IAI47_20510 0.49 +2.0 351,325 - IAI47_20510 0.49 +1.4
Or see this region's nucleotide sequence