Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20380 and IAI47_20385 are separated by 14 nucleotides IAI47_20385 and IAI47_20390 are separated by 62 nucleotides IAI47_20390 and IAI47_20395 are separated by 164 nucleotides
IAI47_20380: IAI47_20380 - diaminobutyrate--2-oxoglutarate transaminase, at 315,073 to 316,458
_20380
IAI47_20385: IAI47_20385 - aspartate aminotransferase family protein, at 316,473 to 317,939
_20385
IAI47_20390: IAI47_20390 - hypothetical protein, at 318,002 to 318,151
_20390
IAI47_20395: IAI47_20395 - MFS transporter, at 318,316 to 319,629
_20395
Position (kb) 316
317
318 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 315.526 kb on - strand, within IAI47_20380 at 315.544 kb on + strand, within IAI47_20380 at 315.545 kb on - strand, within IAI47_20380 at 315.545 kb on - strand, within IAI47_20380 at 315.545 kb on - strand, within IAI47_20380 at 315.552 kb on + strand, within IAI47_20380 at 315.552 kb on + strand, within IAI47_20380 at 315.640 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.703 kb on + strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.704 kb on - strand, within IAI47_20380 at 315.706 kb on + strand, within IAI47_20380 at 315.707 kb on - strand, within IAI47_20380 at 315.707 kb on - strand, within IAI47_20380 at 315.723 kb on + strand, within IAI47_20380 at 315.723 kb on + strand, within IAI47_20380 at 315.987 kb on - strand, within IAI47_20380 at 316.101 kb on + strand, within IAI47_20380 at 316.102 kb on - strand, within IAI47_20380 at 316.102 kb on - strand, within IAI47_20380 at 316.102 kb on - strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.104 kb on + strand, within IAI47_20380 at 316.105 kb on - strand, within IAI47_20380 at 316.105 kb on - strand, within IAI47_20380 at 316.105 kb on - strand, within IAI47_20380 at 316.218 kb on + strand, within IAI47_20380 at 316.355 kb on + strand at 316.356 kb on - strand at 316.356 kb on - strand at 316.356 kb on - strand at 316.358 kb on + strand at 316.358 kb on + strand at 316.358 kb on + strand at 316.358 kb on + strand at 316.358 kb on + strand at 316.359 kb on - strand at 316.413 kb on + strand at 316.484 kb on - strand at 316.515 kb on - strand at 316.524 kb on + strand at 316.548 kb on - strand at 316.562 kb on + strand at 316.562 kb on + strand at 316.562 kb on + strand at 316.563 kb on - strand at 316.563 kb on - strand at 316.563 kb on - strand at 316.587 kb on + strand at 316.587 kb on + strand at 316.587 kb on + strand at 316.587 kb on + strand at 316.588 kb on - strand at 316.686 kb on + strand, within IAI47_20385 at 316.687 kb on - strand, within IAI47_20385 at 316.687 kb on - strand, within IAI47_20385 at 316.700 kb on + strand, within IAI47_20385 at 316.701 kb on - strand, within IAI47_20385 at 316.701 kb on - strand, within IAI47_20385 at 316.881 kb on + strand, within IAI47_20385 at 316.987 kb on + strand, within IAI47_20385 at 317.025 kb on - strand, within IAI47_20385 at 317.059 kb on + strand, within IAI47_20385 at 317.060 kb on - strand, within IAI47_20385 at 317.110 kb on + strand, within IAI47_20385 at 317.110 kb on + strand, within IAI47_20385 at 317.110 kb on + strand, within IAI47_20385 at 317.344 kb on - strand, within IAI47_20385 at 317.391 kb on - strand, within IAI47_20385 at 317.449 kb on - strand, within IAI47_20385 at 317.449 kb on - strand, within IAI47_20385 at 317.475 kb on + strand, within IAI47_20385 at 317.475 kb on + strand, within IAI47_20385 at 317.476 kb on - strand, within IAI47_20385 at 317.476 kb on - strand, within IAI47_20385 at 317.601 kb on + strand, within IAI47_20385 at 317.602 kb on - strand, within IAI47_20385 at 317.652 kb on + strand, within IAI47_20385 at 317.652 kb on + strand, within IAI47_20385 at 317.652 kb on + strand, within IAI47_20385 at 317.652 kb on + strand, within IAI47_20385 at 317.653 kb on - strand, within IAI47_20385 at 317.684 kb on - strand, within IAI47_20385 at 317.778 kb on - strand, within IAI47_20385 at 317.888 kb on + strand at 317.889 kb on - strand at 317.889 kb on - strand at 317.889 kb on - strand at 317.937 kb on + strand at 317.937 kb on + strand at 317.938 kb on - strand at 318.151 kb on + strand at 318.178 kb on + strand at 318.178 kb on + strand at 318.179 kb on - strand at 318.179 kb on - strand at 318.190 kb on + strand at 318.190 kb on + strand at 318.190 kb on + strand at 318.191 kb on - strand at 318.191 kb on - strand at 318.191 kb on - strand at 318.191 kb on - strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.192 kb on + strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.193 kb on - strand at 318.194 kb on + strand at 318.194 kb on + strand at 318.194 kb on + strand at 318.194 kb on + strand at 318.194 kb on + strand at 318.194 kb on + strand at 318.195 kb on - strand at 318.195 kb on - strand at 318.195 kb on - strand at 318.195 kb on - strand at 318.213 kb on + strand at 318.257 kb on + strand at 318.257 kb on + strand at 318.257 kb on + strand at 318.257 kb on + strand at 318.257 kb on + strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.258 kb on - strand at 318.360 kb on + strand at 318.361 kb on - strand at 318.384 kb on + strand at 318.384 kb on + strand at 318.384 kb on + strand at 318.385 kb on - strand at 318.385 kb on - strand at 318.385 kb on - strand at 318.388 kb on + strand at 318.388 kb on + strand at 318.389 kb on - strand at 318.389 kb on - strand at 318.410 kb on + strand at 318.410 kb on + strand at 318.410 kb on + strand at 318.410 kb on + strand at 318.411 kb on - strand at 318.411 kb on - strand at 318.463 kb on + strand, within IAI47_20395 at 318.504 kb on - strand, within IAI47_20395 at 318.504 kb on - strand, within IAI47_20395 at 318.523 kb on - strand, within IAI47_20395 at 318.524 kb on + strand, within IAI47_20395 at 318.524 kb on + strand, within IAI47_20395 at 318.525 kb on - strand, within IAI47_20395 at 318.525 kb on - strand, within IAI47_20395 at 318.622 kb on + strand, within IAI47_20395 at 318.677 kb on - strand, within IAI47_20395 at 318.689 kb on - strand, within IAI47_20395 at 318.750 kb on + strand, within IAI47_20395 at 318.750 kb on + strand, within IAI47_20395 at 318.805 kb on - strand, within IAI47_20395 at 318.833 kb on + strand, within IAI47_20395 at 318.833 kb on + strand, within IAI47_20395 at 318.833 kb on + strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.859 kb on - strand, within IAI47_20395 at 318.860 kb on + strand, within IAI47_20395 at 318.861 kb on - strand, within IAI47_20395 at 318.861 kb on - strand, within IAI47_20395 at 318.861 kb on - strand, within IAI47_20395 at 318.894 kb on + strand, within IAI47_20395 at 318.895 kb on - strand, within IAI47_20395
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 remove 315,526 - IAI47_20380 0.33 -0.8 315,544 + IAI47_20380 0.34 +1.5 315,545 - IAI47_20380 0.34 +0.6 315,545 - IAI47_20380 0.34 -0.9 315,545 - IAI47_20380 0.34 +0.1 315,552 + IAI47_20380 0.35 +5.4 315,552 + IAI47_20380 0.35 +3.1 315,640 + IAI47_20380 0.41 +0.1 315,703 + IAI47_20380 0.45 -0.0 315,703 + IAI47_20380 0.45 +0.4 315,703 + IAI47_20380 0.45 +2.0 315,703 + IAI47_20380 0.45 +0.9 315,703 + IAI47_20380 0.45 +3.1 315,703 + IAI47_20380 0.45 +2.0 315,703 + IAI47_20380 0.45 +1.9 315,703 + IAI47_20380 0.45 +1.3 315,703 + IAI47_20380 0.45 +1.4 315,703 + IAI47_20380 0.45 -0.3 315,704 - IAI47_20380 0.46 -0.0 315,704 - IAI47_20380 0.46 -0.3 315,704 - IAI47_20380 0.46 -0.0 315,704 - IAI47_20380 0.46 +0.7 315,704 - IAI47_20380 0.46 -0.0 315,704 - IAI47_20380 0.46 -0.7 315,704 - IAI47_20380 0.46 -0.6 315,706 + IAI47_20380 0.46 +2.9 315,707 - IAI47_20380 0.46 +0.5 315,707 - IAI47_20380 0.46 -0.1 315,723 + IAI47_20380 0.47 +2.4 315,723 + IAI47_20380 0.47 +0.4 315,987 - IAI47_20380 0.66 -0.5 316,101 + IAI47_20380 0.74 +1.1 316,102 - IAI47_20380 0.74 -0.9 316,102 - IAI47_20380 0.74 -1.8 316,102 - IAI47_20380 0.74 +1.1 316,104 + IAI47_20380 0.74 +1.6 316,104 + IAI47_20380 0.74 +0.2 316,104 + IAI47_20380 0.74 +1.9 316,104 + IAI47_20380 0.74 +2.9 316,104 + IAI47_20380 0.74 +0.9 316,104 + IAI47_20380 0.74 +1.5 316,105 - IAI47_20380 0.74 -1.9 316,105 - IAI47_20380 0.74 -0.5 316,105 - IAI47_20380 0.74 -3.0 316,218 + IAI47_20380 0.83 +1.3 316,355 + -0.1 316,356 - -0.4 316,356 - -0.7 316,356 - -1.7 316,358 + +2.9 316,358 + +3.7 316,358 + -1.3 316,358 + +1.5 316,358 + +3.1 316,359 - -0.3 316,413 + +1.8 316,484 - -0.3 316,515 - -0.2 316,524 + +2.7 316,548 - -0.6 316,562 + +3.0 316,562 + -0.7 316,562 + +2.8 316,563 - -0.6 316,563 - +0.7 316,563 - +0.4 316,587 + -1.2 316,587 + +0.6 316,587 + +1.4 316,587 + +2.4 316,588 - +1.2 316,686 + IAI47_20385 0.15 -0.8 316,687 - IAI47_20385 0.15 +0.3 316,687 - IAI47_20385 0.15 -0.5 316,700 + IAI47_20385 0.15 +5.0 316,701 - IAI47_20385 0.16 -0.2 316,701 - IAI47_20385 0.16 +0.1 316,881 + IAI47_20385 0.28 +2.1 316,987 + IAI47_20385 0.35 +0.4 317,025 - IAI47_20385 0.38 +1.4 317,059 + IAI47_20385 0.40 +0.1 317,060 - IAI47_20385 0.40 -1.1 317,110 + IAI47_20385 0.43 +1.8 317,110 + IAI47_20385 0.43 +2.2 317,110 + IAI47_20385 0.43 +1.8 317,344 - IAI47_20385 0.59 -0.5 317,391 - IAI47_20385 0.63 -1.7 317,449 - IAI47_20385 0.67 -1.0 317,449 - IAI47_20385 0.67 +1.4 317,475 + IAI47_20385 0.68 -0.6 317,475 + IAI47_20385 0.68 +1.4 317,476 - IAI47_20385 0.68 +0.6 317,476 - IAI47_20385 0.68 +1.4 317,601 + IAI47_20385 0.77 +0.6 317,602 - IAI47_20385 0.77 -0.6 317,652 + IAI47_20385 0.80 +0.6 317,652 + IAI47_20385 0.80 +1.3 317,652 + IAI47_20385 0.80 +1.3 317,652 + IAI47_20385 0.80 +1.7 317,653 - IAI47_20385 0.80 -0.0 317,684 - IAI47_20385 0.83 +0.3 317,778 - IAI47_20385 0.89 +1.1 317,888 + +1.7 317,889 - -1.5 317,889 - +2.0 317,889 - +1.7 317,937 + -1.5 317,937 + +0.8 317,938 - -0.2 318,151 + -0.4 318,178 + +2.0 318,178 + +1.1 318,179 - +0.5 318,179 - +0.3 318,190 + -0.3 318,190 + -0.1 318,190 + -0.8 318,191 - +1.1 318,191 - +1.4 318,191 - +0.6 318,191 - +1.3 318,192 + +0.8 318,192 + +1.3 318,192 + -1.0 318,192 + +0.6 318,192 + -1.5 318,192 + -0.8 318,192 + -0.6 318,192 + -1.6 318,193 - -0.0 318,193 - +0.4 318,193 - -0.0 318,193 - +0.8 318,193 - +0.9 318,193 - -0.3 318,193 - -2.7 318,194 + +0.3 318,194 + -0.9 318,194 + +1.7 318,194 + +2.4 318,194 + -0.8 318,194 + +0.7 318,195 - -0.4 318,195 - -1.0 318,195 - +0.1 318,195 - +0.3 318,213 + -1.2 318,257 + +0.7 318,257 + -1.0 318,257 + -0.4 318,257 + +0.3 318,257 + -0.3 318,258 - -0.4 318,258 - -1.1 318,258 - +2.8 318,258 - +1.0 318,258 - +0.8 318,258 - +0.8 318,258 - +2.7 318,360 + -0.4 318,361 - +0.1 318,384 + +1.1 318,384 + +0.4 318,384 + -0.3 318,385 - -1.2 318,385 - +1.0 318,385 - +2.4 318,388 + +0.1 318,388 + -1.1 318,389 - -1.0 318,389 - -0.5 318,410 + +1.3 318,410 + +0.3 318,410 + +1.0 318,410 + -0.4 318,411 - +2.2 318,411 - +0.8 318,463 + IAI47_20395 0.11 +0.1 318,504 - IAI47_20395 0.14 -0.7 318,504 - IAI47_20395 0.14 -1.2 318,523 - IAI47_20395 0.16 +1.0 318,524 + IAI47_20395 0.16 +0.4 318,524 + IAI47_20395 0.16 -1.4 318,525 - IAI47_20395 0.16 -0.1 318,525 - IAI47_20395 0.16 -0.4 318,622 + IAI47_20395 0.23 -2.6 318,677 - IAI47_20395 0.27 +1.4 318,689 - IAI47_20395 0.28 -0.0 318,750 + IAI47_20395 0.33 -0.2 318,750 + IAI47_20395 0.33 +0.3 318,805 - IAI47_20395 0.37 -0.8 318,833 + IAI47_20395 0.39 -1.1 318,833 + IAI47_20395 0.39 +0.7 318,833 + IAI47_20395 0.39 +1.0 318,859 - IAI47_20395 0.41 +0.3 318,859 - IAI47_20395 0.41 -0.4 318,859 - IAI47_20395 0.41 +0.6 318,859 - IAI47_20395 0.41 +2.2 318,859 - IAI47_20395 0.41 +0.6 318,859 - IAI47_20395 0.41 +0.3 318,860 + IAI47_20395 0.41 +0.3 318,861 - IAI47_20395 0.41 -0.1 318,861 - IAI47_20395 0.41 +0.3 318,861 - IAI47_20395 0.41 +0.2 318,894 + IAI47_20395 0.44 +0.3 318,895 - IAI47_20395 0.44 +1.0
Or see this region's nucleotide sequence