Strain Fitness in Pantoea sp. MT58 around IAI47_15565

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,279,274	+		IAI47_15560	0.42	-0.8
3,279,275	-		IAI47_15560	0.42	+1.1
3,279,275	-		IAI47_15560	0.42	-0.2
3,279,335	-		IAI47_15560	0.46	+2.1
3,279,335	-		IAI47_15560	0.46	-0.1
3,279,343	+		IAI47_15560	0.47	-2.0
3,279,343	+		IAI47_15560	0.47	-1.3
3,279,343	+		IAI47_15560	0.47	+0.0
3,279,343	+		IAI47_15560	0.47	-0.7
3,279,344	-		IAI47_15560	0.47	-0.1
3,279,350	+		IAI47_15560	0.47	+0.3
3,279,350	+		IAI47_15560	0.47	-1.2
3,279,364	+		IAI47_15560	0.48	+1.1
3,279,364	+		IAI47_15560	0.48	-0.6
3,279,364	+		IAI47_15560	0.48	-0.9
3,279,364	+		IAI47_15560	0.48	-0.9
3,279,364	+		IAI47_15560	0.48	+0.4
3,279,392	-		IAI47_15560	0.50	+0.1
3,279,400	+		IAI47_15560	0.51	-0.1
3,279,401	-		IAI47_15560	0.51	+0.5
3,279,401	-		IAI47_15560	0.51	+0.5
3,279,432	+		IAI47_15560	0.53	-0.7
3,279,433	-		IAI47_15560	0.53	-0.3
3,279,505	-		IAI47_15560	0.58	-1.2
3,279,505	-		IAI47_15560	0.58	+1.5
3,279,528	+		IAI47_15560	0.60	-0.6
3,279,528	+		IAI47_15560	0.60	-1.2
3,279,628	+		IAI47_15560	0.67	+1.8
3,279,628	+		IAI47_15560	0.67	-1.2
3,279,629	-		IAI47_15560	0.67	-0.6
3,279,648	+		IAI47_15560	0.68	-1.2
3,279,648	+		IAI47_15560	0.68	-0.2
3,279,648	+		IAI47_15560	0.68	-1.9
3,279,648	+		IAI47_15560	0.68	-0.9
3,279,648	+		IAI47_15560	0.68	+0.5
3,279,648	+		IAI47_15560	0.68	-1.4
3,279,649	-		IAI47_15560	0.68	-0.5
3,279,649	-		IAI47_15560	0.68	-0.8
3,279,683	-		IAI47_15560	0.70	-1.4
3,279,721	-		IAI47_15560	0.73	-1.3
3,279,721	-		IAI47_15560	0.73	-0.5
3,279,721	-		IAI47_15560	0.73	+0.5
3,279,721	-		IAI47_15560	0.73	-1.9
3,279,782	-		IAI47_15560	0.77	+0.3
3,279,952	+		IAI47_15560	0.89	-0.9
3,279,953	-		IAI47_15560	0.89	-0.6
3,279,971	+				-2.3
3,279,972	-				-0.6
3,279,972	-				-1.9
3,279,985	+				-2.5
3,279,985	+				-2.3
3,279,985	+				+0.0
3,279,986	-				+0.3
3,279,998	-				-0.3
3,280,013	-				-0.4
3,280,088	+				-2.5
3,280,089	-				+1.2
3,280,089	-				-1.0
3,280,089	-				-0.1
3,280,094	+				-1.3
3,280,094	+				-2.1
3,280,094	+				-1.4
3,280,094	+				-2.8
3,280,094	+				-0.3
3,280,095	-				-1.1
3,280,095	-				+0.7
3,280,125	+				-0.3
3,280,125	+				-2.2
3,280,125	+				-0.5
3,280,131	+				-0.5
3,280,131	+				-0.2
3,280,131	+				-0.3
3,280,131	+				-0.8
3,280,132	-				-0.8
3,280,132	-				+1.0
3,280,176	+				-1.4
3,280,246	+				-1.0
3,280,246	+				-0.3
3,280,246	+				-1.1
3,280,246	+				+1.0
3,280,247	-				-1.2
3,280,252	-				-0.8
3,280,252	-				+0.7
3,280,252	-				+0.7
3,280,252	-				+0.3
3,280,252	-				+2.7
3,280,285	+				+0.9
3,280,285	+				-1.4
3,280,285	+				-2.1
3,280,286	-				-0.5
3,280,286	-				-1.3
3,280,307	+				-0.1
3,280,307	+				+0.3
3,280,308	-				-0.2
3,280,308	-				+0.6
3,280,308	-				-0.3
3,280,333	+				+1.0
3,280,336	+				+0.9
3,280,336	+				-1.6
3,280,336	+				-0.5
3,280,336	+				+0.6
3,280,336	+				-1.7
3,280,337	-				+1.7
3,280,337	-				-0.4
3,280,337	-				-0.1
3,280,360	+				-2.1
3,280,360	+				-0.6
3,280,361	-				-0.6
3,280,361	-				-2.4
3,280,361	-				-1.0
3,280,364	+				-2.3
3,280,364	+				+0.2
3,280,364	+				-1.1
3,280,365	-				-0.8
3,280,365	-				+0.3
3,280,365	-				+0.2
3,280,365	-				-1.2
3,280,365	-				+0.3
3,280,372	-				+0.1
3,280,382	+				-1.6
3,280,382	+				+0.7
3,280,399	+		IAI47_15565	0.10	-0.7
3,280,399	+		IAI47_15565	0.10	-1.2
3,280,406	+		IAI47_15565	0.11	-1.2
3,280,407	-		IAI47_15565	0.11	-1.3
3,280,407	-		IAI47_15565	0.11	-1.1
3,280,427	+		IAI47_15565	0.12	+0.1
3,280,428	-		IAI47_15565	0.12	+1.0
3,280,476	+		IAI47_15565	0.15	-2.3
3,280,477	-		IAI47_15565	0.16	-1.7
3,280,498	+		IAI47_15565	0.17	-2.5
3,280,498	+		IAI47_15565	0.17	-0.1
3,280,499	-		IAI47_15565	0.17	-0.1
3,280,499	-		IAI47_15565	0.17	-1.7
3,280,522	+		IAI47_15565	0.19	+0.1
3,280,523	-		IAI47_15565	0.19	-1.0
3,280,523	-		IAI47_15565	0.19	+0.9
3,280,523	-		IAI47_15565	0.19	-0.1
3,280,552	+		IAI47_15565	0.21	-1.1
3,280,589	+		IAI47_15565	0.23	-0.6
3,280,589	+		IAI47_15565	0.23	-0.7
3,280,590	-		IAI47_15565	0.23	+0.6
3,280,616	+		IAI47_15565	0.25	-2.9
3,280,630	-		IAI47_15565	0.26	+1.2
3,280,686	+		IAI47_15565	0.30	-0.5
3,280,686	+		IAI47_15565	0.30	-1.9
3,280,686	+		IAI47_15565	0.30	-1.0
3,280,686	+		IAI47_15565	0.30	-0.4
3,280,688	+		IAI47_15565	0.30	+0.8
3,280,688	+		IAI47_15565	0.30	-1.1
3,280,688	+		IAI47_15565	0.30	-2.1
3,280,688	+		IAI47_15565	0.30	+0.3
3,280,688	+		IAI47_15565	0.30	-0.5
3,280,689	-		IAI47_15565	0.30	-0.8
3,280,700	+		IAI47_15565	0.31	-2.0
3,280,723	+		IAI47_15565	0.32	-0.7
3,280,723	+		IAI47_15565	0.32	-2.4
3,280,723	+		IAI47_15565	0.32	-1.5
3,280,728	+		IAI47_15565	0.32	-1.1
3,280,749	+		IAI47_15565	0.34	-0.8
3,280,756	-		IAI47_15565	0.34	-0.2
3,280,756	-		IAI47_15565	0.34	+0.4
3,280,796	+		IAI47_15565	0.37	-0.9
3,280,796	+		IAI47_15565	0.37	-0.4
3,280,796	+		IAI47_15565	0.37	-1.1
3,280,827	-		IAI47_15565	0.39	+0.1
3,280,827	-		IAI47_15565	0.39	+0.3
3,280,847	+		IAI47_15565	0.40	-0.6
3,280,902	-		IAI47_15565	0.44	+1.6
3,280,902	-		IAI47_15565	0.44	-0.2
3,280,941	-		IAI47_15565	0.47	+4.3
3,280,941	-		IAI47_15565	0.47	-0.3
3,280,941	-		IAI47_15565	0.47	+1.1
3,280,945	+		IAI47_15565	0.47	-0.9
3,280,945	+		IAI47_15565	0.47	+1.2
3,280,945	+		IAI47_15565	0.47	-0.7
3,280,945	+		IAI47_15565	0.47	+1.2
3,280,946	-		IAI47_15565	0.47	-0.4
3,280,946	-		IAI47_15565	0.47	-1.0
3,280,946	-		IAI47_15565	0.47	+2.2
3,280,946	-		IAI47_15565	0.47	+1.3
3,280,952	+		IAI47_15565	0.47	-0.5
3,280,952	+		IAI47_15565	0.47	-0.2
3,280,953	-		IAI47_15565	0.47	+0.4
3,280,953	-		IAI47_15565	0.47	-0.5
3,280,971	+		IAI47_15565	0.49	+2.0
3,280,971	+		IAI47_15565	0.49	+1.5
3,280,971	+		IAI47_15565	0.49	-0.9
3,280,971	+		IAI47_15565	0.49	-0.1
3,280,972	-		IAI47_15565	0.49	-1.1
3,280,972	-		IAI47_15565	0.49	+0.2
3,280,972	-		IAI47_15565	0.49	+0.4
3,280,973	+		IAI47_15565	0.49	+1.1
3,280,973	+		IAI47_15565	0.49	-1.5
3,280,974	-		IAI47_15565	0.49	-0.5
3,280,974	-		IAI47_15565	0.49	+0.8
3,280,974	-		IAI47_15565	0.49	+0.1
3,280,974	-		IAI47_15565	0.49	+0.1
3,280,974	-		IAI47_15565	0.49	+0.7
3,280,974	-		IAI47_15565	0.49	-0.5
3,280,975	+		IAI47_15565	0.49	+0.3
3,280,975	+		IAI47_15565	0.49	+0.9
3,280,975	+		IAI47_15565	0.49	+0.1
3,280,975	+		IAI47_15565	0.49	-0.4
3,280,975	+		IAI47_15565	0.49	-1.2
3,280,975	+		IAI47_15565	0.49	-0.1
3,280,976	-		IAI47_15565	0.49	+1.3
3,280,976	-		IAI47_15565	0.49	-0.4
3,280,976	-		IAI47_15565	0.49	+0.1
3,280,976	-		IAI47_15565	0.49	+1.0
3,280,979	+		IAI47_15565	0.49	-0.8
3,280,979	+		IAI47_15565	0.49	-0.2
3,280,980	-		IAI47_15565	0.49	+0.4
3,280,980	-		IAI47_15565	0.49	-0.1
3,280,980	-		IAI47_15565	0.49	+0.5
3,281,022	+		IAI47_15565	0.52	+0.0
3,281,023	-		IAI47_15565	0.52	+0.2
3,281,023	-		IAI47_15565	0.52	-0.8
3,281,023	-		IAI47_15565	0.52	+0.2
3,281,033	+		IAI47_15565	0.53	-0.9
3,281,033	+		IAI47_15565	0.53	-0.9
3,281,033	+		IAI47_15565	0.53	-0.3
3,281,033	+		IAI47_15565	0.53	-0.5
3,281,033	+		IAI47_15565	0.53	+0.7
3,281,033	+		IAI47_15565	0.53	-0.3
3,281,033	+		IAI47_15565	0.53	-1.1
3,281,033	+		IAI47_15565	0.53	+0.4
3,281,034	-		IAI47_15565	0.53	-0.2
3,281,034	-		IAI47_15565	0.53	-1.3
3,281,035	+		IAI47_15565	0.53	+0.4
3,281,035	+		IAI47_15565	0.53	-0.2
3,281,035	+		IAI47_15565	0.53	-1.4
3,281,035	+		IAI47_15565	0.53	-1.6
3,281,035	+		IAI47_15565	0.53	+1.3
3,281,035	+		IAI47_15565	0.53	-1.0
3,281,035	+		IAI47_15565	0.53	-0.3
3,281,035	+		IAI47_15565	0.53	-1.1
3,281,036	-		IAI47_15565	0.53	-0.5
3,281,036	-		IAI47_15565	0.53	-0.5
3,281,036	-		IAI47_15565	0.53	-2.2
3,281,036	-		IAI47_15565	0.53	-1.9
3,281,053	+		IAI47_15565	0.54	-0.4
3,281,054	-		IAI47_15565	0.54	-0.7
3,281,054	-		IAI47_15565	0.54	-0.8
3,281,074	-		IAI47_15565	0.56	+0.0
3,281,074	-		IAI47_15565	0.56	+1.3
3,281,082	-		IAI47_15565	0.56	-1.5
3,281,124	-		IAI47_15565	0.59	-0.1
3,281,125	+		IAI47_15565	0.59	-0.4
3,281,125	+		IAI47_15565	0.59	-0.6
3,281,125	+		IAI47_15565	0.59	+0.3
3,281,125	+		IAI47_15565	0.59	-1.0
3,281,125	+		IAI47_15565	0.59	-0.1
3,281,126	-		IAI47_15565	0.59	-0.2
3,281,126	-		IAI47_15565	0.59	-0.5
3,281,153	-		IAI47_15565	0.61	-0.7
3,281,177	+		IAI47_15565	0.63	-0.3
3,281,177	+		IAI47_15565	0.63	+0.6
3,281,177	+		IAI47_15565	0.63	-0.7
3,281,177	+		IAI47_15565	0.63	-0.8
3,281,177	+		IAI47_15565	0.63	-2.1
3,281,177	+		IAI47_15565	0.63	-2.1
3,281,177	+		IAI47_15565	0.63	-0.7
3,281,178	-		IAI47_15565	0.63	-1.9
3,281,178	-		IAI47_15565	0.63	-2.2
3,281,178	-		IAI47_15565	0.63	-0.3
3,281,178	-		IAI47_15565	0.63	-0.1
3,281,178	-		IAI47_15565	0.63	-1.4
3,281,178	-		IAI47_15565	0.63	+0.1
3,281,178	-		IAI47_15565	0.63	-2.3
3,281,186	+		IAI47_15565	0.63	-1.1
3,281,186	+		IAI47_15565	0.63	-2.1
3,281,187	-		IAI47_15565	0.63	+0.1
3,281,187	-		IAI47_15565	0.63	-1.5
3,281,187	-		IAI47_15565	0.63	-0.3
3,281,289	+		IAI47_15565	0.70	-1.0
3,281,290	-		IAI47_15565	0.70	-1.0
3,281,446	+		IAI47_15565	0.81	-0.7
3,281,446	+		IAI47_15565	0.81	-0.5
3,281,446	+		IAI47_15565	0.81	+0.1
3,281,447	-		IAI47_15565	0.81	+0.8
3,281,447	-		IAI47_15565	0.81	+0.2
3,281,447	-		IAI47_15565	0.81	-2.2
3,281,447	-		IAI47_15565	0.81	+0.2
3,281,447	-		IAI47_15565	0.81	+0.3
3,281,500	+		IAI47_15565	0.84	-0.2
3,281,500	+		IAI47_15565	0.84	+0.7
3,281,500	+		IAI47_15565	0.84	+0.1
3,281,500	+		IAI47_15565	0.84	+1.4
3,281,500	+		IAI47_15565	0.84	+0.3
3,281,501	-		IAI47_15565	0.84	+1.7
3,281,618	+				+0.1
3,281,619	-				+1.3
3,281,651	+				-1.4
3,281,652	-				+0.5
3,281,652	-				-0.4
3,281,656	+				-0.8
3,281,656	+				+0.7
3,281,656	+				-0.1
3,281,656	+				-1.0
3,281,656	+				-0.8
3,281,656	+				-0.3
3,281,656	+				+0.5
3,281,656	+				-0.1
3,281,656	+				-1.4
3,281,656	+				-0.1
3,281,656	+				-0.1
3,281,656	+				+1.5
3,281,656	+				-0.9
3,281,657	-				+1.3
3,281,657	-				+0.2
3,281,657	-				+1.4
3,281,657	-				+0.6
3,281,657	-				-0.4
3,281,657	-				-0.3
3,281,657	-				+1.7
3,281,657	-				+0.4
3,281,657	-				-0.6
3,281,657	-				-1.2
3,281,659	+				+0.1
3,281,659	+				-0.2
3,281,660	-				-0.5
3,281,687	+				-1.6
3,281,687	+				+0.3
3,281,687	+				-1.9
3,281,687	+				+0.2
3,281,687	+				-0.7
3,281,687	+				-2.8
3,281,688	-				-1.4
3,281,688	-				+0.0
3,281,688	-				+1.7
3,281,688	-				-0.6
3,281,688	-				+0.8
3,281,688	-				-0.2
3,281,688	-				+0.1
3,281,688	-				+1.0
3,281,688	-				-1.1
3,281,688	-				+0.7
3,281,689	+				-0.1
3,281,689	+				-0.0
3,281,689	+				+0.9
3,281,689	+				+0.3
3,281,689	+				-0.1
3,281,689	+				+0.5
3,281,689	+				-2.2
3,281,689	+				-0.6
3,281,689	+				+0.5
3,281,690	-				-0.7
3,281,690	-				+1.0
3,281,740	+				-1.5
3,281,740	+				+0.3
3,281,741	-				+2.0
3,281,762	+				-0.1
3,281,762	+				+1.0
3,281,763	-				+1.5
3,281,763	-				+1.3
3,281,781	+				+0.1
3,281,782	+				+0.8
3,281,782	+				+0.3
3,281,782	+				-0.0
3,281,782	+				-0.2
3,281,782	+				+1.0
3,281,782	+				-1.8
3,281,783	-				-1.9
3,281,783	-				-0.0
3,281,783	-				-1.4
3,281,783	-				+1.0
3,281,788	-				-0.9
3,281,788	-				-0.1
3,281,788	-				+0.3
3,281,788	-				+0.5
3,281,809	+				+0.1
3,281,809	+				+1.3
3,281,809	+				-0.3
3,281,809	+				+2.9
3,281,809	+				+3.6
3,281,809	+				+0.7
3,281,809	+				+0.3
3,282,553	+				-0.3
3,282,554	-				-0.4
3,282,554	-				-1.3
3,282,554	-				-0.1
3,282,554	-				-0.8
3,282,554	-				-0.2
3,282,554	-				-1.1
3,282,554	-				-2.4
3,282,556	+				-1.0
3,282,557	-				-0.3
3,282,591	-				-0.5
3,282,591	-				-0.3
3,282,638	+		IAI47_15575	0.15	-0.2
3,282,639	-		IAI47_15575	0.15	-0.7
3,282,731	+		IAI47_15575	0.27	+0.6
3,282,731	+		IAI47_15575	0.27	+0.8
3,282,731	+		IAI47_15575	0.27	+0.3
3,282,731	+		IAI47_15575	0.27	+0.2
3,282,732	-		IAI47_15575	0.27	+0.1