Strain Fitness in Pantoea sp. MT58 around IAI47_10615

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,242,332	+				-1.7
2,242,344	-				-0.9
2,242,370	+				+0.3
2,242,371	-				+1.5
2,242,371	-				-0.1
2,242,394	+				-1.8
2,242,394	+				+0.1
2,242,394	+				-0.4
2,242,394	+				-0.4
2,242,395	-				-0.2
2,242,395	-				+0.2
2,242,398	+				+0.7
2,242,398	+				-0.9
2,242,398	+				-0.4
2,242,398	+				-0.1
2,242,398	+				-0.5
2,242,398	+				+1.3
2,242,398	+				+0.3
2,242,399	-				-0.2
2,242,399	-				-0.1
2,242,399	-				+0.1
2,242,399	-				+0.2
2,242,399	-				-0.9
2,242,399	-				+1.1
2,242,399	-				-2.0
2,242,399	-				+0.8
2,242,399	-				-1.2
2,242,439	+				+2.1
2,242,440	-				+0.1
2,242,472	+				+0.3
2,242,473	-				-0.4
2,242,473	-				-0.5
2,242,511	+		IAI47_10610	0.13	+1.4
2,242,512	-		IAI47_10610	0.13	-0.2
2,242,512	-		IAI47_10610	0.13	-0.1
2,242,606	-		IAI47_10610	0.24	-1.7
2,242,606	-		IAI47_10610	0.24	-0.8
2,242,621	+		IAI47_10610	0.26	-0.5
2,242,622	-		IAI47_10610	0.26	-1.0
2,242,692	+		IAI47_10610	0.35	+1.8
2,242,725	+		IAI47_10610	0.38	-0.1
2,242,725	+		IAI47_10610	0.38	+0.8
2,242,757	+		IAI47_10610	0.42	+0.9
2,242,795	+		IAI47_10610	0.47	+2.0
2,242,795	+		IAI47_10610	0.47	+1.6
2,242,795	+		IAI47_10610	0.47	+2.0
2,242,795	+		IAI47_10610	0.47	-0.1
2,242,796	-		IAI47_10610	0.47	-0.7
2,242,796	-		IAI47_10610	0.47	-0.6
2,242,796	-		IAI47_10610	0.47	+0.3
2,242,822	-		IAI47_10610	0.50	-0.4
2,242,822	-		IAI47_10610	0.50	-0.6
2,242,830	+		IAI47_10610	0.51	-0.6
2,242,831	-		IAI47_10610	0.51	+1.3
2,242,876	+		IAI47_10610	0.56	+2.2
2,242,876	+		IAI47_10610	0.56	+0.9
2,242,876	+		IAI47_10610	0.56	+1.5
2,242,877	-		IAI47_10610	0.56	+1.1
2,242,877	-		IAI47_10610	0.56	-0.2
2,243,047	+		IAI47_10610	0.76	+1.1
2,243,048	-		IAI47_10610	0.76	+0.1
2,243,048	-		IAI47_10610	0.76	+2.1
2,243,048	-		IAI47_10610	0.76	-0.5
2,243,048	-		IAI47_10610	0.76	+0.8
2,243,048	-		IAI47_10610	0.76	+0.4
2,243,050	+		IAI47_10610	0.77	-0.8
2,243,050	+		IAI47_10610	0.77	+1.9
2,243,050	+		IAI47_10610	0.77	+0.1
2,243,050	+		IAI47_10610	0.77	+0.2
2,243,051	-		IAI47_10610	0.77	+1.4
2,243,051	-		IAI47_10610	0.77	-0.1
2,243,051	-		IAI47_10610	0.77	+0.9
2,243,061	+		IAI47_10610	0.78	+0.4
2,243,061	+		IAI47_10610	0.78	-0.4
2,243,113	+		IAI47_10610	0.84	-0.1
2,243,113	+		IAI47_10610	0.84	+0.5
2,243,113	+		IAI47_10610	0.84	+0.9
2,243,113	+		IAI47_10610	0.84	+0.2
2,243,114	-		IAI47_10610	0.84	+0.3
2,243,114	-		IAI47_10610	0.84	-0.9
2,243,114	-		IAI47_10610	0.84	-0.8
2,243,114	-		IAI47_10610	0.84	+1.4
2,243,154	+		IAI47_10610	0.89	+1.3
2,243,245	+				-1.5
2,243,245	+				+0.2
2,243,246	-				+0.5
2,243,295	+				+0.6
2,243,372	+				+1.3
2,243,372	+				+0.8
2,243,415	+		IAI47_10615	0.12	-1.0
2,243,415	+		IAI47_10615	0.12	-0.4
2,243,415	+		IAI47_10615	0.12	-1.6
2,243,415	+		IAI47_10615	0.12	-0.8
2,243,415	+		IAI47_10615	0.12	+0.3
2,243,416	-		IAI47_10615	0.12	-0.6
2,243,416	-		IAI47_10615	0.12	-0.1
2,243,532	+		IAI47_10615	0.26	-0.2
2,243,532	+		IAI47_10615	0.26	-0.9
2,243,532	+		IAI47_10615	0.26	+0.3
2,243,532	+		IAI47_10615	0.26	-0.1
2,243,532	+		IAI47_10615	0.26	-0.4
2,243,533	-		IAI47_10615	0.26	-0.7
2,243,535	-		IAI47_10615	0.26	-0.1
2,243,636	+		IAI47_10615	0.38	-1.5
2,243,636	+		IAI47_10615	0.38	+1.1
2,243,637	-		IAI47_10615	0.38	-1.9
2,243,637	-		IAI47_10615	0.38	-0.3
2,243,637	-		IAI47_10615	0.38	-0.1
2,243,678	+		IAI47_10615	0.43	+0.5
2,243,678	+		IAI47_10615	0.43	-0.9
2,243,679	-		IAI47_10615	0.43	-0.8
2,243,679	-		IAI47_10615	0.43	-0.9
2,243,679	-		IAI47_10615	0.43	-0.9
2,243,679	-		IAI47_10615	0.43	-0.6
2,243,693	+		IAI47_10615	0.44	-1.2
2,243,693	+		IAI47_10615	0.44	-0.8
2,243,694	-		IAI47_10615	0.44	-1.4
2,243,703	+		IAI47_10615	0.45	+0.8
2,243,775	+		IAI47_10615	0.54	+1.8
2,243,776	-		IAI47_10615	0.54	-0.4
2,243,787	+		IAI47_10615	0.55	+1.5
2,243,787	+		IAI47_10615	0.55	+0.3
2,243,788	-		IAI47_10615	0.55	-1.5
2,243,788	-		IAI47_10615	0.55	-0.9
2,243,788	-		IAI47_10615	0.55	+0.1
2,243,796	-		IAI47_10615	0.56	-0.7
2,243,796	-		IAI47_10615	0.56	-0.7
2,243,796	-		IAI47_10615	0.56	-1.1
2,243,886	+		IAI47_10615	0.67	-0.2
2,243,909	+		IAI47_10615	0.69	+0.7
2,243,909	+		IAI47_10615	0.69	+0.2
2,243,910	-		IAI47_10615	0.69	-0.7
2,243,912	+		IAI47_10615	0.70	-0.4
2,243,913	-		IAI47_10615	0.70	+0.4
2,243,954	+		IAI47_10615	0.75	-1.4
2,243,963	+		IAI47_10615	0.76	-0.1
2,243,963	+		IAI47_10615	0.76	-0.5
2,243,964	-		IAI47_10615	0.76	-0.2
2,243,964	-		IAI47_10615	0.76	+0.6
2,243,964	-		IAI47_10615	0.76	-0.8
2,243,984	+		IAI47_10615	0.78	-1.7
2,243,985	-		IAI47_10615	0.78	-0.2
2,243,998	+		IAI47_10615	0.80	+2.5
2,244,093	+				-0.5
2,244,093	+				-0.5
2,244,094	-				-1.9
2,244,094	-				-0.2
2,244,094	-				+1.1
2,244,094	-				+0.3
2,244,094	-				-0.1
2,244,100	+				-0.0
2,244,123	+				-0.4
2,244,165	-				+0.0
2,244,165	-				+1.0
2,244,167	+				+0.5
2,244,167	+				+1.1
2,244,168	-				-0.5
2,244,168	-				+0.8
2,244,171	+				-0.5
2,244,171	+				-1.2
2,244,172	-				+0.9
2,244,214	+				+1.8
2,244,289	-		IAI47_10620	0.12	+0.9
2,244,333	+		IAI47_10620	0.17	-0.5
2,244,333	+		IAI47_10620	0.17	-1.0
2,244,341	+		IAI47_10620	0.17	+0.9
2,244,341	+		IAI47_10620	0.17	-0.6
2,244,341	+		IAI47_10620	0.17	-0.4
2,244,437	+		IAI47_10620	0.27	+0.3
2,244,438	-		IAI47_10620	0.27	-0.8
2,244,507	+		IAI47_10620	0.34	-0.6
2,244,507	+		IAI47_10620	0.34	-1.1
2,244,508	-		IAI47_10620	0.34	+0.4
2,244,541	-		IAI47_10620	0.37	+2.2
2,244,693	+		IAI47_10620	0.52	-1.1
2,244,693	+				+0.9
2,244,693	+		IAI47_10620	0.52	+0.1
2,244,693	+		IAI47_10620	0.52	-0.4
2,244,693	+		IAI47_10620	0.52	+0.6
2,244,694	-		IAI47_10620	0.52	+0.9
2,244,694	-		IAI47_10620	0.52	+0.8
2,244,694	-		IAI47_10620	0.52	+1.2
2,244,726	+		IAI47_10620	0.55	+0.4
2,244,726	+		IAI47_10620	0.55	+3.1
2,244,727	-		IAI47_10620	0.55	-0.8
2,244,727	-		IAI47_10620	0.55	+0.6
2,244,727	-		IAI47_10620	0.55	+0.4
2,244,762	-		IAI47_10620	0.59	-1.4
2,244,818	+		IAI47_10620	0.64	+0.5
2,244,819	+		IAI47_10620	0.65	+1.6
2,244,819	+		IAI47_10620	0.65	+0.1
2,244,819	+		IAI47_10620	0.65	-0.3
2,244,819	+		IAI47_10620	0.65	+0.2
2,244,819	+		IAI47_10620	0.65	+0.4
2,244,819	+		IAI47_10620	0.65	+1.7
2,244,819	+		IAI47_10620	0.65	-1.4
2,244,819	+		IAI47_10620	0.65	-0.5
2,244,819	+		IAI47_10620	0.65	+0.3
2,244,819	+		IAI47_10620	0.65	+0.2
2,244,819	+		IAI47_10620	0.65	+1.5
2,244,819	+		IAI47_10620	0.65	-1.4
2,244,819	+		IAI47_10620	0.65	+0.0
2,244,820	-		IAI47_10620	0.65	+1.5
2,244,820	-		IAI47_10620	0.65	-0.8
2,244,820	-		IAI47_10620	0.65	+1.3
2,244,820	-		IAI47_10620	0.65	-0.6
2,244,820	-		IAI47_10620	0.65	+1.7
2,244,820	-		IAI47_10620	0.65	+1.0
2,244,820	-		IAI47_10620	0.65	-2.2
2,244,820	-		IAI47_10620	0.65	+0.3
2,244,820	-		IAI47_10620	0.65	+0.6
2,244,820	-		IAI47_10620	0.65	+1.7
2,244,820	-		IAI47_10620	0.65	+1.1
2,244,820	-		IAI47_10620	0.65	-1.3
2,244,820	-		IAI47_10620	0.65	+1.9
2,244,820	-		IAI47_10620	0.65	+0.3
2,244,820	-		IAI47_10620	0.65	+1.3
2,244,820	-		IAI47_10620	0.65	+0.8
2,244,820	-		IAI47_10620	0.65	+0.9
2,244,820	-		IAI47_10620	0.65	+1.5
2,244,820	-		IAI47_10620	0.65	+0.6
2,244,821	+		IAI47_10620	0.65	+0.5
2,244,821	+		IAI47_10620	0.65	+0.8
2,244,821	+		IAI47_10620	0.65	+0.7
2,244,821	+		IAI47_10620	0.65	-0.3
2,244,822	-		IAI47_10620	0.65	-1.3
2,244,822	-		IAI47_10620	0.65	-0.4
2,244,822	-		IAI47_10620	0.65	+0.4
2,244,822	-		IAI47_10620	0.65	+0.8
2,244,822	-		IAI47_10620	0.65	+1.1
2,244,822	-		IAI47_10620	0.65	-0.9
2,244,893	+		IAI47_10620	0.72	+2.1
2,244,893	+		IAI47_10620	0.72	+0.0
2,244,893	+		IAI47_10620	0.72	-0.1
2,244,894	-		IAI47_10620	0.72	+0.6
2,244,894	-		IAI47_10620	0.72	+1.2
2,244,942	+		IAI47_10620	0.77	-1.5
2,244,942	+		IAI47_10620	0.77	+0.7
2,244,943	-		IAI47_10620	0.77	+0.1
2,244,943	-		IAI47_10620	0.77	+0.0
2,244,943	-		IAI47_10620	0.77	-0.8
2,244,944	+		IAI47_10620	0.77	+0.5
2,244,944	+		IAI47_10620	0.77	+0.9
2,244,944	+		IAI47_10620	0.77	+0.4
2,244,945	-		IAI47_10620	0.77	-0.3
2,244,999	+		IAI47_10620	0.82	-0.7
2,244,999	+		IAI47_10620	0.82	+1.7
2,244,999	+		IAI47_10620	0.82	-0.1
2,245,023	-		IAI47_10620	0.85	+0.6
2,245,028	+		IAI47_10620	0.85	-0.5
2,245,029	+		IAI47_10620	0.85	-0.9
2,245,029	+		IAI47_10620	0.85	+1.5
2,245,029	+		IAI47_10620	0.85	-0.6
2,245,030	-		IAI47_10620	0.85	-1.0
2,245,030	-		IAI47_10620	0.85	+0.8
2,245,030	-		IAI47_10620	0.85	+0.6
2,245,032	+		IAI47_10620	0.86	-0.1
2,245,038	+		IAI47_10620	0.86	+0.8
2,245,039	-		IAI47_10620	0.86	+0.9
2,245,041	+		IAI47_10620	0.87	+0.5
2,245,041	+		IAI47_10620	0.87	+0.6
2,245,041	+		IAI47_10620	0.87	+0.8
2,245,042	-		IAI47_10620	0.87	-0.8
2,245,047	+		IAI47_10620	0.87	-2.4
2,245,048	-		IAI47_10620	0.87	-0.4
2,245,151	+				+1.1
2,245,151	+				+1.4
2,245,152	-				-0.5
2,245,152	-				+0.1
2,245,152	-				-0.6
2,245,152	-				-1.1
2,245,152	-				-1.1
2,245,152	-				-1.4
2,245,155	+				+0.1
2,245,155	+				-1.5
2,245,155	+				-0.1
2,245,155	+				+0.0
2,245,155	+				-0.8
2,245,155	+				-0.1
2,245,155	+				-1.4
2,245,155	+				-1.3
2,245,155	+				+1.5
2,245,155	+				+0.8
2,245,155	+				+0.3
2,245,155	+				+0.5
2,245,155	+				-0.6
2,245,155	+				+0.3
2,245,155	+				+0.1
2,245,155	+				+0.7
2,245,155	+				-0.2
2,245,155	+				-0.6
2,245,156	-				+0.6
2,245,156	-				-0.8
2,245,156	-				-1.9
2,245,156	-				-0.6
2,245,156	-				-0.9
2,245,156	-				+0.3
2,245,156	-				-1.2
2,245,156	-				-1.3
2,245,156	-				+0.2
2,245,156	-				-1.1
2,245,168	+				+0.9