Strain Fitness in Pantoea sp. MT58 around IAI47_10500

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,225,137	+		IAI47_10495	0.59	-1.3
2,225,137	+		IAI47_10495	0.59	+0.9
2,225,138	-		IAI47_10495	0.59	+1.3
2,225,138	-		IAI47_10495	0.59	-0.3
2,225,205	+		IAI47_10495	0.69	-0.1
2,225,206	-		IAI47_10495	0.69	-1.1
2,225,206	-		IAI47_10495	0.69	-0.5
2,225,206	-		IAI47_10495	0.69	+0.5
2,225,214	-		IAI47_10495	0.70	+1.1
2,225,291	+		IAI47_10495	0.81	+1.3
2,225,315	+		IAI47_10495	0.84	-0.7
2,225,315	+		IAI47_10495	0.84	-1.1
2,225,345	+		IAI47_10495	0.89	+1.5
2,225,345	+		IAI47_10495	0.89	-0.3
2,225,346	-		IAI47_10495	0.89	+0.1
2,225,358	-				+0.6
2,225,403	+				+1.1
2,225,403	+				+1.3
2,225,403	+				-1.5
2,225,404	-				+1.1
2,225,404	-				+0.5
2,225,404	-				-0.1
2,225,404	-				-1.5
2,225,456	-				-2.1
2,225,456	-				-0.1
2,225,460	+				-0.1
2,225,515	+				+2.1
2,225,516	-				-1.9
2,225,516	-				-0.9
2,225,559	-				-0.6
2,225,559	-				-0.8
2,225,702	+				-0.9
2,225,702	+				-0.1
2,225,702	+				+0.0
2,225,703	-				+0.0
2,225,703	-				+0.5
2,225,703	-				-1.0
2,225,703	-				-1.4
2,225,703	-				-1.2
2,225,703	-				+1.5
2,225,712	+				-0.7
2,225,743	+				+1.5
2,225,744	-				-0.3
2,225,744	-				-0.3
2,225,754	+				-1.1
2,225,755	-				+1.2
2,225,755	-				+0.3
2,225,768	+				-0.1
2,225,769	-				-1.7
2,225,772	-				+0.8
2,225,813	+				+0.2
2,225,813	+				+1.3
2,225,813	+				+1.1
2,225,814	-				-0.1
2,225,814	-				-0.9
2,225,814	-				+0.1
2,225,814	-				+0.2
2,225,814	-				-0.1
2,225,816	+				-0.7
2,225,816	+				-0.9
2,225,816	+				-0.8
2,225,816	+				-1.3
2,225,817	-				-0.8
2,225,817	-				-0.8
2,225,817	-				-0.7
2,225,823	-				-0.3
2,225,853	-				+1.8
2,225,858	+				-0.2
2,225,858	+				-1.4
2,225,858	+				-0.5
2,225,859	-				+0.3
2,225,861	+				+1.1
2,225,908	-				+0.9
2,225,908	-				-0.8
2,225,909	+				+0.7
2,225,975	-				-0.1
2,225,987	+				+3.4
2,225,987	+				+1.6
2,225,988	-				+0.9
2,225,988	-				+1.9
2,226,007	+				-0.1
2,226,007	+				+0.6
2,226,007	+				-0.4
2,226,007	+				+1.1
2,226,007	+				-0.1
2,226,007	+				+1.5
2,226,008	-				+1.5
2,226,008	-				-0.3
2,226,008	-				-0.1
2,226,011	-				+4.7
2,226,011	-				-0.6
2,226,087	+				+0.8
2,226,087	+				+0.8
2,226,087	+				-0.7
2,226,087	+				+1.0
2,226,087	+				+4.1
2,226,088	-				-0.2
2,226,088	-				+0.5
2,226,088	-				-0.6
2,226,088	-				+2.5
2,226,088	-				-1.0
2,226,088	-				+0.3
2,226,088	-				+0.8
2,226,088	-				+1.1
2,226,088	-				+0.3
2,226,088	-				-0.1
2,226,088	-				+1.2
2,226,161	+				+0.9
2,226,161	+				+1.1
2,226,162	-				-1.4
2,226,165	+				+1.7
2,226,165	+				+1.1
2,226,166	-				+0.3
2,226,166	-				+1.3
2,226,184	-				+1.3
2,226,203	+				+0.5
2,226,203	+				+2.8
2,226,204	-				+1.3
2,226,204	-				-1.0
2,226,221	-				+1.5
2,226,230	+				+0.2
2,226,231	-				-0.2
2,226,303	-		IAI47_10500	0.14	-0.3
2,226,338	-		IAI47_10500	0.16	-0.8
2,226,338	-		IAI47_10500	0.16	+0.6
2,226,437	+		IAI47_10500	0.23	+2.5
2,226,437	+		IAI47_10500	0.23	+0.1
2,226,437	+		IAI47_10500	0.23	+0.8
2,226,438	-		IAI47_10500	0.23	+0.5
2,226,439	+		IAI47_10500	0.23	-0.3
2,226,439	+		IAI47_10500	0.23	+2.1
2,226,439	+		IAI47_10500	0.23	+0.9
2,226,440	-		IAI47_10500	0.23	+1.2
2,226,557	+		IAI47_10500	0.31	-0.0
2,226,557	+		IAI47_10500	0.31	+1.3
2,226,557	+		IAI47_10500	0.31	+2.3
2,226,557	+		IAI47_10500	0.31	+0.1
2,226,557	+		IAI47_10500	0.31	+1.5
2,226,557	+		IAI47_10500	0.31	+3.1
2,226,557	+		IAI47_10500	0.31	+1.1
2,226,557	+		IAI47_10500	0.31	-0.2
2,226,558	-		IAI47_10500	0.31	-1.2
2,226,558	-		IAI47_10500	0.31	-0.5
2,226,558	-		IAI47_10500	0.31	+0.8
2,226,558	-		IAI47_10500	0.31	+0.8
2,226,559	+		IAI47_10500	0.31	+2.1
2,226,559	+		IAI47_10500	0.31	+1.8
2,226,559	+		IAI47_10500	0.31	+1.1
2,226,559	+		IAI47_10500	0.31	+0.7
2,226,560	-		IAI47_10500	0.31	-1.0
2,226,560	-		IAI47_10500	0.31	-0.1
2,226,620	+		IAI47_10500	0.35	+0.1
2,226,620	+		IAI47_10500	0.35	-0.3
2,226,620	+		IAI47_10500	0.35	+2.8
2,226,621	-		IAI47_10500	0.35	-0.5
2,226,621	-		IAI47_10500	0.35	+1.5
2,226,626	+		IAI47_10500	0.36	+2.5
2,226,626	+		IAI47_10500	0.36	+0.5
2,226,664	+		IAI47_10500	0.38	+0.1
2,226,664	+		IAI47_10500	0.38	+2.4
2,226,665	-		IAI47_10500	0.38	+2.1
2,226,665	-		IAI47_10500	0.38	-0.6
2,226,665	-		IAI47_10500	0.38	+2.1
2,226,668	-		IAI47_10500	0.38	-1.3
2,226,676	+		IAI47_10500	0.39	+2.0
2,226,691	+		IAI47_10500	0.40	+3.1
2,226,691	+		IAI47_10500	0.40	+3.1
2,226,697	+		IAI47_10500	0.40	+1.1
2,226,697	+		IAI47_10500	0.40	-1.1
2,226,697	+		IAI47_10500	0.40	+2.5
2,226,697	+		IAI47_10500	0.40	-0.1
2,226,698	-		IAI47_10500	0.40	+0.1
2,226,698	-		IAI47_10500	0.40	+0.3
2,226,698	-		IAI47_10500	0.40	-0.7
2,226,698	-		IAI47_10500	0.40	-1.5
2,226,698	-		IAI47_10500	0.40	+0.5
2,226,698	-		IAI47_10500	0.40	-0.3
2,226,710	+		IAI47_10500	0.41	+2.8
2,226,710	+		IAI47_10500	0.41	+1.7
2,226,718	+		IAI47_10500	0.42	+1.7
2,226,719	-		IAI47_10500	0.42	-0.6
2,226,767	-		IAI47_10500	0.45	+0.6
2,226,821	-		IAI47_10500	0.49	-0.9
2,226,910	+		IAI47_10500	0.54	+3.0
2,226,965	+		IAI47_10500	0.58	+1.7
2,226,965	+		IAI47_10500	0.58	+0.8
2,226,965	+		IAI47_10500	0.58	+3.1
2,226,965	+		IAI47_10500	0.58	+2.5
2,226,966	-		IAI47_10500	0.58	-1.1
2,226,966	-		IAI47_10500	0.58	-0.7
2,226,966	-		IAI47_10500	0.58	+0.4
2,226,966	-		IAI47_10500	0.58	-1.6
2,226,966	-		IAI47_10500	0.58	+0.2
2,226,967	+		IAI47_10500	0.58	-0.7
2,226,967	+		IAI47_10500	0.58	-0.3
2,226,967	+		IAI47_10500	0.58	-0.1
2,226,967	+		IAI47_10500	0.58	+2.4
2,226,967	+		IAI47_10500	0.58	+0.8
2,226,968	-		IAI47_10500	0.58	+3.4
2,227,031	-		IAI47_10500	0.62	+0.1
2,227,033	+		IAI47_10500	0.63	+1.9
2,227,033	+		IAI47_10500	0.63	+0.9
2,227,034	-		IAI47_10500	0.63	+0.2
2,227,034	-		IAI47_10500	0.63	+0.3
2,227,109	+		IAI47_10500	0.68	+3.7
2,227,109	+		IAI47_10500	0.68	+1.7
2,227,109	+		IAI47_10500	0.68	-0.1
2,227,110	-		IAI47_10500	0.68	+3.5
2,227,110	-		IAI47_10500	0.68	-0.6
2,227,111	+		IAI47_10500	0.68	+2.4
2,227,111	+		IAI47_10500	0.68	+1.7
2,227,126	+		IAI47_10500	0.69	-0.1
2,227,159	+		IAI47_10500	0.71	+2.4
2,227,159	+		IAI47_10500	0.71	+1.3
2,227,159	+		IAI47_10500	0.71	+0.3
2,227,160	-		IAI47_10500	0.71	+0.8
2,227,160	-		IAI47_10500	0.71	+1.1
2,227,236	+		IAI47_10500	0.76	-1.1
2,227,256	+		IAI47_10500	0.77	-1.2
2,227,256	+		IAI47_10500	0.77	+0.1
2,227,257	-		IAI47_10500	0.78	-0.2
2,227,270	+		IAI47_10500	0.78	+1.9
2,227,270	+		IAI47_10500	0.78	+1.6
2,227,270	+		IAI47_10500	0.78	-0.1
2,227,271	-		IAI47_10500	0.78	+0.5
2,227,348	+		IAI47_10500	0.84	+0.9
2,227,348	+		IAI47_10500	0.84	+1.5
2,227,348	+		IAI47_10500	0.84	+1.8
2,227,348	+		IAI47_10500	0.84	+2.1
2,227,396	+		IAI47_10500	0.87	+0.1
2,227,431	+		IAI47_10500	0.89	+3.1
2,227,460	+				+0.2
2,227,461	-				+0.5
2,227,461	-				-1.1
2,227,461	-				-1.7
2,227,470	+				+0.4
2,227,592	+				+1.5
2,227,593	-				+0.8
2,227,638	+				-1.2
2,227,658	-				+0.5
2,227,675	+				-0.7
2,227,676	-				-1.1
2,227,676	-				+1.0
2,227,703	+				+0.3
2,227,703	+				-2.3
2,227,704	-				+1.4
2,227,704	-				+0.4
2,227,704	-				+2.1
2,227,704	-				-0.7
2,227,706	+				-2.4
2,227,706	+				+0.8
2,227,707	-				-0.2
2,227,707	-				+1.5
2,227,707	-				+1.6
2,227,707	-				-1.9
2,227,707	-				-1.1
2,227,734	+				+0.6
2,227,734	+				+1.1
2,227,735	-				-0.7
2,227,735	-				+2.3
2,227,735	-				-0.7
2,227,735	-				+0.3
2,227,735	-				+0.7
2,227,735	-				-0.1
2,227,794	-				-0.1
2,227,794	-				-0.8
2,227,887	-		IAI47_10505	0.24	-0.1
2,227,922	+		IAI47_10505	0.30	-0.2
2,227,923	-		IAI47_10505	0.30	+0.5
2,227,951	+		IAI47_10505	0.34	+1.1
2,227,951	+		IAI47_10505	0.34	-1.2
2,227,951	+		IAI47_10505	0.34	+0.7
2,227,952	-		IAI47_10505	0.34	-1.1
2,227,952	-		IAI47_10505	0.34	-0.9
2,227,952	-		IAI47_10505	0.34	-1.1
2,227,956	+		IAI47_10505	0.35	-0.5
2,227,956	+		IAI47_10505	0.35	+1.5
2,227,956	+		IAI47_10505	0.35	-1.0
2,227,956	+		IAI47_10505	0.35	-0.4
2,227,956	+		IAI47_10505	0.35	-0.2
2,227,957	-		IAI47_10505	0.35	-0.7
2,227,957	-		IAI47_10505	0.35	+0.3
2,228,040	+		IAI47_10505	0.49	+0.4
2,228,040	+		IAI47_10505	0.49	+1.3
2,228,040	+		IAI47_10505	0.49	+0.8
2,228,146	-		IAI47_10505	0.67	-0.6
2,228,161	+		IAI47_10505	0.69	+0.1
2,228,161	+		IAI47_10505	0.69	-0.3
2,228,161	+		IAI47_10505	0.69	-0.4
2,228,162	-		IAI47_10505	0.69	-0.9
2,228,162	-		IAI47_10505	0.69	+0.3
2,228,162	-		IAI47_10505	0.69	+0.4
2,228,211	+		IAI47_10505	0.77	-0.4
2,228,211	+		IAI47_10505	0.77	+0.4
2,228,212	-		IAI47_10505	0.77	+0.3
2,228,212	-		IAI47_10505	0.77	-0.8
2,228,212	-		IAI47_10505	0.77	+0.9
2,228,212	-		IAI47_10505	0.77	+2.4
2,228,212	-		IAI47_10505	0.77	+0.7
2,228,268	-		IAI47_10505	0.87	-0.2
2,228,342	-				-0.7
2,228,455	-				-0.1
2,228,490	+		IAI47_10510	0.13	+0.8
2,228,491	-		IAI47_10510	0.13	-0.4
2,228,548	+		IAI47_10510	0.19	+0.5
2,228,549	-		IAI47_10510	0.20	+2.4
2,228,569	+		IAI47_10510	0.22	+0.2
2,228,570	-		IAI47_10510	0.22	-0.4