Strain Fitness in Pantoea sp. MT58 around IAI47_10025

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,121,756	-		IAI47_10020	0.87	+0.5
2,121,893	+				+0.7
2,121,922	+				-0.6
2,121,923	-				+1.6
2,121,923	-				-0.0
2,121,923	-				+1.5
2,121,925	+				-0.9
2,121,925	+				+0.8
2,121,925	+				-0.0
2,121,926	-				+0.4
2,121,926	-				+1.0
2,121,926	-				+2.5
2,121,934	-				-0.4
2,121,934	-				+2.9
2,121,934	-				-0.8
2,121,968	+				-1.2
2,121,968	+				+0.1
2,121,968	+				-0.4
2,121,968	+				-0.3
2,121,968	+				-1.2
2,121,969	-				+1.9
2,122,010	+				+2.3
2,122,010	+				-1.8
2,122,011	-				+1.0
2,122,042	+				+0.2
2,122,043	-				-0.0
2,122,043	-				+1.8
2,122,085	-				+2.6
2,122,093	+				-0.7
2,122,093	+				-0.1
2,122,097	+				-1.1
2,122,097	+				-0.2
2,122,097	+				-0.0
2,122,097	+				+0.5
2,122,097	+				+0.1
2,122,097	+				-1.5
2,122,098	-				+0.5
2,122,098	-				+1.2
2,122,098	-				-0.8
2,122,098	-				+0.3
2,122,098	-				+0.5
2,122,098	-				+2.1
2,122,149	-				-0.0
2,122,152	+				-0.3
2,122,153	-				+0.5
2,122,162	+				-0.9
2,122,163	-				+0.2
2,122,170	+				-2.8
2,122,193	+				+0.3
2,122,212	+				-0.3
2,122,257	-				-1.7
2,122,257	-				-1.4
2,122,258	+				+2.3
2,122,258	+				+0.4
2,122,258	+				+0.3
2,122,259	-				-0.1
2,122,259	-				+0.1
2,122,259	-				+3.3
2,122,259	-				+0.7
2,122,273	+				-0.6
2,122,279	+				+1.1
2,122,280	-				-0.5
2,122,280	-				+0.1
2,122,280	-				-1.8
2,122,280	-				+1.5
2,122,280	-				+2.3
2,122,288	-				+0.1
2,122,291	+				-3.6
2,122,291	+				+0.5
2,122,291	+				+0.5
2,122,292	-				+0.2
2,122,321	+				-0.1
2,122,322	-				-2.6
2,122,322	-				+0.0
2,122,322	-				-0.7
2,122,342	-				+1.2
2,122,343	+				-1.9
2,122,354	+				-0.5
2,122,355	-				+1.3
2,122,355	-				-1.5
2,122,355	-				-0.2
2,122,355	-				-0.0
2,122,355	-				-0.2
2,122,355	-				+0.9
2,122,360	+				-0.4
2,122,360	+				+0.1
2,122,361	-				+0.8
2,122,361	-				+1.1
2,122,361	-				-0.2
2,122,388	+				-0.0
2,122,389	-				+1.0
2,122,394	+				-0.3
2,122,395	-				-0.2
2,122,395	-				+0.5
2,122,421	+				-1.9
2,122,421	+				+1.0
2,122,421	+				-0.4
2,122,449	+				-0.3
2,122,481	+				+0.4
2,122,482	-				-0.1
2,122,516	+				+1.0
2,122,517	-				+1.7
2,122,536	-				+0.5
2,122,574	+				+0.3
2,122,582	-				-0.5
2,122,582	-				+0.3
2,122,585	-				+1.0
2,122,646	-				+1.5
2,122,656	+				+0.1
2,122,734	+				+1.7
2,122,734	+				-1.5
2,122,735	-				+1.4
2,122,735	-				+1.3
2,122,797	+				+0.3
2,122,798	-				-0.2
2,122,826	+				+0.8
2,122,874	+		IAI47_10025	0.14	+1.7
2,122,874	+		IAI47_10025	0.14	+0.7
2,122,875	-		IAI47_10025	0.14	+0.7
2,122,875	-		IAI47_10025	0.14	+0.2
2,122,890	-		IAI47_10025	0.15	+0.5
2,122,890	-		IAI47_10025	0.15	+1.3
2,122,903	+		IAI47_10025	0.17	-1.0
2,123,013	+		IAI47_10025	0.27	-0.4
2,123,061	+		IAI47_10025	0.32	+2.3
2,123,110	+		IAI47_10025	0.37	-0.0
2,123,122	+		IAI47_10025	0.38	+2.1
2,123,122	+		IAI47_10025	0.38	+0.7
2,123,160	+		IAI47_10025	0.42	-0.4
2,123,180	-		IAI47_10025	0.44	+0.7
2,123,190	+		IAI47_10025	0.45	-1.3
2,123,196	+		IAI47_10025	0.45	-0.8
2,123,197	-		IAI47_10025	0.45	+0.6
2,123,258	+		IAI47_10025	0.51	-0.1
2,123,258	+		IAI47_10025	0.51	-0.8
2,123,292	-		IAI47_10025	0.55	+0.6
2,123,292	-		IAI47_10025	0.55	-2.7
2,123,331	+		IAI47_10025	0.59	+1.7
2,123,386	+		IAI47_10025	0.64	+0.1
2,123,387	+		IAI47_10025	0.64	-1.0
2,123,387	+		IAI47_10025	0.64	+1.0
2,123,388	-		IAI47_10025	0.64	+0.1
2,123,388	-		IAI47_10025	0.64	-1.2
2,123,390	+		IAI47_10025	0.64	+0.3
2,123,390	+		IAI47_10025	0.64	+1.5
2,123,462	+		IAI47_10025	0.71	-1.0
2,123,462	+		IAI47_10025	0.71	-0.7
2,123,463	-		IAI47_10025	0.72	-0.9
2,123,463	-		IAI47_10025	0.72	-0.7
2,123,484	+		IAI47_10025	0.74	-0.4
2,123,512	+		IAI47_10025	0.76	-1.3
2,123,512	+		IAI47_10025	0.76	+0.1
2,123,513	-		IAI47_10025	0.76	+0.5
2,123,513	-		IAI47_10025	0.76	+0.3
2,123,513	-		IAI47_10025	0.76	-0.7
2,123,513	-		IAI47_10025	0.76	+0.1
2,123,553	-		IAI47_10025	0.80	+0.3
2,123,553	-		IAI47_10025	0.80	+0.1
2,123,559	+		IAI47_10025	0.81	+1.3
2,123,559	+		IAI47_10025	0.81	-0.0
2,123,560	-		IAI47_10025	0.81	+0.7
2,123,602	-		IAI47_10025	0.85	-0.3
2,123,620	+		IAI47_10025	0.87	-1.0
2,123,621	-		IAI47_10025	0.87	-0.3
2,123,739	+				+1.5
2,123,739	+				-0.6
2,123,739	+				+1.5
2,123,739	+				+0.8
2,123,740	-				-0.6
2,123,740	-				-0.7
2,123,750	-				-0.0
2,123,802	-				+2.7
2,123,805	+				-1.2
2,123,838	+				+0.3
2,123,839	-				-1.0
2,123,856	+				-1.4
2,123,857	-				-0.1
2,123,925	+				+0.3
2,123,925	+				-0.0
2,123,925	+				-0.3
2,123,926	-				+0.8
2,123,926	-				+1.8
2,123,938	+				-0.8
2,123,939	-				-1.0
2,123,939	-				-1.6
2,123,939	-				-0.4
2,123,939	-				+1.3
2,123,939	-				-1.0
2,123,939	-				-1.4
2,123,939	-				-0.4
2,123,939	-				-0.8
2,123,939	-				+1.0
2,123,970	+				+1.7
2,123,970	+				-1.0
2,123,971	-				+0.5
2,124,005	+				+1.2
2,124,006	-				+1.0
2,124,006	-				-0.4
2,124,006	-				-1.0
2,124,057	-				-0.0
2,124,057	-				-1.0
2,124,095	+		IAI47_10030	0.12	+2.5
2,124,111	-		IAI47_10030	0.13	-1.6
2,124,126	+		IAI47_10030	0.14	-0.4
2,124,126	+		IAI47_10030	0.14	+3.0
2,124,127	-		IAI47_10030	0.14	+1.0
2,124,127	-		IAI47_10030	0.14	-0.3
2,124,151	+		IAI47_10030	0.16	+1.1
2,124,314	+		IAI47_10030	0.28	+0.1
2,124,452	+		IAI47_10030	0.39	-0.9
2,124,473	-		IAI47_10030	0.40	+0.4
2,124,473	-		IAI47_10030	0.40	+1.3
2,124,473	-		IAI47_10030	0.40	-0.8
2,124,675	-		IAI47_10030	0.55	-0.5
2,124,689	+		IAI47_10030	0.56	+1.0
2,124,689	+		IAI47_10030	0.56	+0.4
2,124,689	+		IAI47_10030	0.56	+1.8
2,124,689	+		IAI47_10030	0.56	-0.1
2,124,689	+		IAI47_10030	0.56	-0.0
2,124,689	+		IAI47_10030	0.56	-1.5
2,124,690	-		IAI47_10030	0.57	+2.0
2,124,690	-		IAI47_10030	0.57	+0.6
2,124,690	-		IAI47_10030	0.57	-0.7
2,124,690	-		IAI47_10030	0.57	-0.3
2,124,726	-		IAI47_10030	0.59	+1.3
2,124,726	-		IAI47_10030	0.59	+0.3
2,124,726	-		IAI47_10030	0.59	-0.4
2,124,737	-		IAI47_10030	0.60	+2.3
2,124,746	+		IAI47_10030	0.61	+1.2
2,124,746	+		IAI47_10030	0.61	+1.9
2,124,746	+		IAI47_10030	0.61	-0.4
2,124,746	+		IAI47_10030	0.61	+1.3
2,124,747	-		IAI47_10030	0.61	-0.4