Strain Fitness in Pantoea sp. MT58 around IAI47_08645

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,823,787	-		IAI47_08635	0.34	-1.4
1,823,838	+		IAI47_08635	0.49	-0.8
1,823,838	+		IAI47_08635	0.49	-0.0
1,823,909	+		IAI47_08635	0.71	-0.6
1,823,910	-		IAI47_08635	0.71	+0.4
1,823,924	-		IAI47_08635	0.75	-0.3
1,823,924	-		IAI47_08635	0.75	+0.3
1,823,927	+		IAI47_08635	0.76	+1.3
1,823,927	+		IAI47_08635	0.76	-2.6
1,823,928	-		IAI47_08635	0.76	+0.2
1,823,934	+		IAI47_08635	0.78	-0.6
1,823,935	-		IAI47_08635	0.78	+0.1
1,823,935	-		IAI47_08635	0.78	+0.2
1,823,935	-		IAI47_08635	0.78	-0.9
1,823,935	-		IAI47_08635	0.78	+0.1
1,823,935	-		IAI47_08635	0.78	+0.6
1,823,936	+		IAI47_08635	0.79	-0.4
1,823,937	-		IAI47_08635	0.79	+0.1
1,824,009	+				+1.1
1,824,010	-				+2.0
1,824,010	-				+0.4
1,824,113	+		IAI47_08640	0.34	+0.6
1,824,113	+		IAI47_08640	0.34	+0.4
1,824,113	+		IAI47_08640	0.34	-0.8
1,824,113	+		IAI47_08640	0.34	-0.0
1,824,113	+		IAI47_08640	0.34	+1.1
1,824,113	+		IAI47_08640	0.34	+1.1
1,824,113	+		IAI47_08640	0.34	-0.2
1,824,113	+		IAI47_08640	0.34	+1.1
1,824,113	+		IAI47_08640	0.34	-0.3
1,824,114	-		IAI47_08640	0.35	+0.5
1,824,114	-		IAI47_08640	0.35	+0.7
1,824,114	-		IAI47_08640	0.35	+1.8
1,824,114	-		IAI47_08640	0.35	-1.4
1,824,114	-		IAI47_08640	0.35	+0.6
1,824,114	-		IAI47_08640	0.35	-0.5
1,824,114	-		IAI47_08640	0.35	-0.3
1,824,114	-		IAI47_08640	0.35	+0.4
1,824,115	+		IAI47_08640	0.35	-0.2
1,824,115	+		IAI47_08640	0.35	+0.8
1,824,115	+		IAI47_08640	0.35	+0.9
1,824,115	+		IAI47_08640	0.35	-0.8
1,824,116	-		IAI47_08640	0.35	+0.4
1,824,116	-		IAI47_08640	0.35	+1.9
1,824,116	-		IAI47_08640	0.35	-0.2
1,824,116	-		IAI47_08640	0.35	+0.2
1,824,124	+		IAI47_08640	0.38	+0.1
1,824,124	+		IAI47_08640	0.38	+2.9
1,824,125	-		IAI47_08640	0.38	+1.1
1,824,125	-		IAI47_08640	0.38	+1.5
1,824,125	-		IAI47_08640	0.38	+0.8
1,824,125	-		IAI47_08640	0.38	-1.0
1,824,129	+		IAI47_08640	0.39	-0.7
1,824,129	+		IAI47_08640	0.39	+1.1
1,824,129	+		IAI47_08640	0.39	-0.4
1,824,130	-		IAI47_08640	0.39	-0.8
1,824,130	-		IAI47_08640	0.39	+1.2
1,824,130	-		IAI47_08640	0.39	+0.8
1,824,130	-		IAI47_08640	0.39	-0.4
1,824,165	-		IAI47_08640	0.49	-0.8
1,824,183	+		IAI47_08640	0.54	+1.4
1,824,184	-		IAI47_08640	0.55	-1.6
1,824,184	-		IAI47_08640	0.55	+0.3
1,824,211	-		IAI47_08640	0.62	+1.5
1,824,211	-		IAI47_08640	0.62	+0.6
1,824,212	+		IAI47_08640	0.63	-0.0
1,824,212	+		IAI47_08640	0.63	+0.1
1,824,212	+		IAI47_08640	0.63	+0.6
1,824,212	+		IAI47_08640	0.63	-0.8
1,824,212	+		IAI47_08640	0.63	-0.3
1,824,212	+		IAI47_08640	0.63	-0.1
1,824,212	+		IAI47_08640	0.63	+1.1
1,824,212	+		IAI47_08640	0.63	+0.8
1,824,212	+		IAI47_08640	0.63	+0.4
1,824,212	+		IAI47_08640	0.63	+1.0
1,824,213	-		IAI47_08640	0.63	+0.2
1,824,213	-		IAI47_08640	0.63	-1.2
1,824,213	-		IAI47_08640	0.63	-0.2
1,824,213	-		IAI47_08640	0.63	+0.1
1,824,213	-		IAI47_08640	0.63	-0.4
1,824,245	+		IAI47_08640	0.72	-0.8
1,824,246	-		IAI47_08640	0.72	+2.1
1,824,265	+		IAI47_08640	0.78	-0.3
1,824,265	+		IAI47_08640	0.78	+0.7
1,824,266	-		IAI47_08640	0.78	+0.2
1,824,283	-		IAI47_08640	0.83	-0.8
1,824,297	+		IAI47_08640	0.87	-0.9
1,824,298	-		IAI47_08640	0.87	-1.6
1,824,325	+				-1.2
1,824,325	+				-0.2
1,824,326	-				-1.9
1,824,326	-				-1.4
1,824,326	-				-0.7
1,824,379	+				-0.8
1,824,412	-				-0.8
1,824,431	+				+1.2
1,824,431	+				+0.4
1,824,432	-				+1.3
1,824,432	-				+1.1
1,824,442	-				-0.3
1,824,442	-				-0.7
1,824,524	-				-1.2
1,824,563	+				-0.2
1,824,563	+				-0.6
1,824,564	-				-1.0
1,824,564	-				-1.9
1,824,594	-				-0.4
1,824,613	+				+0.8
1,824,628	+				-0.2
1,824,629	-				+4.2
1,824,696	+				+0.8
1,824,696	+				-0.4
1,824,696	+				+0.4
1,824,697	-				-0.3
1,824,697	-				-0.4
1,824,699	+				-0.4
1,824,699	+				-0.6
1,824,700	-				-1.2
1,824,700	-				-0.8
1,824,700	-				+0.3
1,824,702	+				+0.7
1,824,702	+				+0.6
1,824,702	+				-0.8
1,824,703	-				-2.2
1,824,703	-				-1.8
1,824,800	+				+0.1
1,824,800	+				-1.8
1,824,800	+				-0.1
1,824,800	+				-0.4
1,824,801	-				+2.1
1,824,801	-				-0.0
1,824,826	+				-0.4
1,824,826	+				-0.0
1,824,826	+				+2.6
1,824,826	+				-0.2
1,824,826	+				-1.1
1,824,826	+				-0.6
1,824,826	+				-1.2
1,824,826	+				-0.0
1,824,826	+				+0.8
1,824,826	+				-1.9
1,824,826	+				-0.7
1,824,826	+				-1.7
1,824,826	+				-0.2
1,824,827	-				+1.7
1,824,827	-				+1.1
1,824,827	-				+1.6
1,824,827	-				+2.8
1,824,827	-				+0.1
1,824,827	-				+1.1
1,824,827	-				-0.3
1,824,827	-				+0.4
1,824,827	-				-1.1
1,824,827	-				-1.6
1,824,827	-				+1.4
1,824,827	-				+1.0
1,824,827	-				+0.8
1,824,827	-				-0.0
1,824,827	-				-0.8
1,824,829	+				-1.3
1,824,829	+				-0.2
1,824,829	+				-1.2
1,824,829	+				-0.2
1,824,829	+				+0.8
1,824,830	-				+0.9
1,824,830	-				+0.6
1,824,830	-				+0.7
1,824,830	-				+3.4
1,824,830	-				+0.3
1,824,830	-				+1.8
1,824,830	-				+0.8
1,824,917	+				-1.5
1,824,938	+				-0.4
1,824,939	-				+2.5
1,824,960	+		IAI47_08645	0.11	-0.3
1,825,025	+		IAI47_08645	0.15	+0.6
1,825,025	+		IAI47_08645	0.15	+0.1
1,825,026	-		IAI47_08645	0.15	+1.1
1,825,026	-		IAI47_08645	0.15	+1.4
1,825,026	-		IAI47_08645	0.15	-1.2
1,825,032	-		IAI47_08645	0.15	+1.0
1,825,064	+		IAI47_08645	0.17	+0.9
1,825,065	-		IAI47_08645	0.17	+0.6
1,825,132	+		IAI47_08645	0.21	+0.0
1,825,132	+		IAI47_08645	0.21	+0.4
1,825,132	+		IAI47_08645	0.21	+0.7
1,825,132	+		IAI47_08645	0.21	-0.0
1,825,133	-		IAI47_08645	0.21	+1.4
1,825,133	-		IAI47_08645	0.21	+1.6
1,825,133	-		IAI47_08645	0.21	+0.7
1,825,133	-		IAI47_08645	0.21	+0.4
1,825,133	-		IAI47_08645	0.21	-0.0
1,825,133	-		IAI47_08645	0.21	+1.5
1,825,133	-		IAI47_08645	0.21	+1.5
1,825,136	+		IAI47_08645	0.21	+0.9
1,825,137	-		IAI47_08645	0.21	-1.0
1,825,137	-		IAI47_08645	0.21	+1.7
1,825,137	-		IAI47_08645	0.21	+1.6
1,825,179	-		IAI47_08645	0.24	+1.4
1,825,219	+		IAI47_08645	0.26	-0.9
1,825,219	+		IAI47_08645	0.26	+1.2
1,825,219	+		IAI47_08645	0.26	-1.1
1,825,219	+		IAI47_08645	0.26	+0.7
1,825,219	+		IAI47_08645	0.26	-0.9
1,825,219	+		IAI47_08645	0.26	-1.0
1,825,219	+		IAI47_08645	0.26	-1.0
1,825,219	+		IAI47_08645	0.26	-1.1
1,825,220	-		IAI47_08645	0.26	+0.8
1,825,220	-		IAI47_08645	0.26	+1.3
1,825,220	-		IAI47_08645	0.26	+1.8
1,825,338	-		IAI47_08645	0.33	+0.1
1,825,338	-		IAI47_08645	0.33	+1.1
1,825,338	-		IAI47_08645	0.33	+0.6
1,825,348	+		IAI47_08645	0.34	-1.8
1,825,348	+		IAI47_08645	0.34	+0.1
1,825,349	-		IAI47_08645	0.34	+2.1
1,825,349	-		IAI47_08645	0.34	-0.2
1,825,349	-		IAI47_08645	0.34	+2.1
1,825,352	+		IAI47_08645	0.34	+2.1
1,825,352	+		IAI47_08645	0.34	+0.4
1,825,353	-		IAI47_08645	0.34	+0.9
1,825,353	-		IAI47_08645	0.34	+1.6
1,825,353	-		IAI47_08645	0.34	+0.7
1,825,353	-		IAI47_08645	0.34	+0.8
1,825,375	+		IAI47_08645	0.36	+1.3
1,825,376	-		IAI47_08645	0.36	+2.1
1,825,376	-		IAI47_08645	0.36	+2.7
1,825,416	-		IAI47_08645	0.38	+1.9
1,825,463	+		IAI47_08645	0.41	-0.5
1,825,463	+		IAI47_08645	0.41	-0.1
1,825,463	+		IAI47_08645	0.41	-0.8
1,825,463	+		IAI47_08645	0.41	+1.1
1,825,464	-		IAI47_08645	0.41	+1.7
1,825,505	+		IAI47_08645	0.43	-0.2
1,825,505	+		IAI47_08645	0.43	-0.4
1,825,505	+		IAI47_08645	0.43	-0.0
1,825,506	-		IAI47_08645	0.43	+1.1
1,825,506	-		IAI47_08645	0.43	+1.9
1,825,506	-		IAI47_08645	0.43	+1.1
1,825,535	+		IAI47_08645	0.45	-0.6
1,825,535	+		IAI47_08645	0.45	+0.7
1,825,536	-		IAI47_08645	0.45	+0.7
1,825,543	+		IAI47_08645	0.46	-0.4
1,825,543	+		IAI47_08645	0.46	+1.2
1,825,544	-		IAI47_08645	0.46	+1.6
1,825,552	+		IAI47_08645	0.46	+1.9
1,825,552	+		IAI47_08645	0.46	-0.5
1,825,552	+		IAI47_08645	0.46	-0.4
1,825,552	+		IAI47_08645	0.46	-0.2
1,825,552	+		IAI47_08645	0.46	+1.1
1,825,552	+		IAI47_08645	0.46	+0.9
1,825,552	+		IAI47_08645	0.46	-2.3
1,825,552	+		IAI47_08645	0.46	-1.7
1,825,553	-		IAI47_08645	0.46	+2.3
1,825,553	-		IAI47_08645	0.46	+0.6
1,825,553	-		IAI47_08645	0.46	+1.6
1,825,553	-		IAI47_08645	0.46	-0.9
1,825,613	+		IAI47_08645	0.50	-0.7
1,825,679	+		IAI47_08645	0.54	+3.3
1,825,680	-		IAI47_08645	0.54	-0.2
1,825,680	-		IAI47_08645	0.54	+0.8
1,825,680	-		IAI47_08645	0.54	-0.1
1,825,680	-		IAI47_08645	0.54	+1.6
1,825,692	+		IAI47_08645	0.54	+0.4
1,825,692	+		IAI47_08645	0.54	-1.8
1,825,692	+		IAI47_08645	0.54	+0.1
1,825,692	+		IAI47_08645	0.54	-1.4
1,825,692	+		IAI47_08645	0.54	+0.2
1,825,692	+		IAI47_08645	0.54	-0.7
1,825,693	-		IAI47_08645	0.54	-0.3
1,825,693	-		IAI47_08645	0.54	+2.6
1,825,722	-		IAI47_08645	0.56	+2.3
1,825,722	-		IAI47_08645	0.56	+2.3
1,825,722	-		IAI47_08645	0.56	+1.3
1,825,722	-		IAI47_08645	0.56	+1.0
1,825,722	-		IAI47_08645	0.56	+0.8
1,825,722	-		IAI47_08645	0.56	+0.3
1,825,725	-		IAI47_08645	0.56	+0.6
1,825,750	+		IAI47_08645	0.58	+0.7
1,825,808	+		IAI47_08645	0.61	-1.5
1,825,808	+		IAI47_08645	0.61	-2.1
1,825,808	+		IAI47_08645	0.61	+1.0
1,825,808	+		IAI47_08645	0.61	-0.5
1,825,809	-		IAI47_08645	0.61	+0.8
1,825,849	+		IAI47_08645	0.64	-0.8
1,825,850	-		IAI47_08645	0.64	+0.9
1,825,887	+		IAI47_08645	0.66	-2.0
1,825,888	-		IAI47_08645	0.66	+0.1
1,825,888	-		IAI47_08645	0.66	+0.5
1,825,892	+		IAI47_08645	0.66	+2.1
1,825,892	+		IAI47_08645	0.66	+1.7
1,825,892	+		IAI47_08645	0.66	-1.0
1,825,892	+		IAI47_08645	0.66	-0.0
1,825,893	-		IAI47_08645	0.66	+1.3
1,825,925	-		IAI47_08645	0.68	+0.1
1,825,997	+		IAI47_08645	0.72	+1.6
1,825,998	-		IAI47_08645	0.73	+1.8
1,826,009	+		IAI47_08645	0.73	-0.6
1,826,064	-		IAI47_08645	0.76	+2.9
1,826,081	+		IAI47_08645	0.77	-0.3
1,826,082	-		IAI47_08645	0.78	-1.5
1,826,086	+		IAI47_08645	0.78	-0.9
1,826,087	-		IAI47_08645	0.78	+1.7
1,826,089	+		IAI47_08645	0.78	+0.5
1,826,089	+		IAI47_08645	0.78	-0.5
1,826,089	+		IAI47_08645	0.78	+0.7
1,826,089	+		IAI47_08645	0.78	+0.3
1,826,089	+		IAI47_08645	0.78	-0.3
1,826,089	+		IAI47_08645	0.78	-0.4
1,826,089	+		IAI47_08645	0.78	+0.8
1,826,090	-		IAI47_08645	0.78	+1.1
1,826,107	+		IAI47_08645	0.79	-2.0
1,826,108	-		IAI47_08645	0.79	+1.6
1,826,108	-		IAI47_08645	0.79	+0.3
1,826,108	-		IAI47_08645	0.79	+2.2
1,826,108	-		IAI47_08645	0.79	-0.4
1,826,108	-		IAI47_08645	0.79	-0.2
1,826,108	-		IAI47_08645	0.79	+0.8
1,826,108	-		IAI47_08645	0.79	+1.8
1,826,162	+		IAI47_08645	0.82	-0.3
1,826,173	+		IAI47_08645	0.83	-0.9
1,826,173	+		IAI47_08645	0.83	-0.3
1,826,173	+		IAI47_08645	0.83	-1.5
1,826,173	+		IAI47_08645	0.83	+1.3
1,826,174	-		IAI47_08645	0.83	+1.6
1,826,174	-		IAI47_08645	0.83	+0.9
1,826,174	-		IAI47_08645	0.83	+0.1
1,826,180	+		IAI47_08645	0.83	-1.2
1,826,181	-		IAI47_08645	0.83	+1.1
1,826,181	-		IAI47_08645	0.83	+0.4
1,826,181	-		IAI47_08645	0.83	+1.7
1,826,181	-		IAI47_08645	0.83	+0.8
1,826,181	-		IAI47_08645	0.83	-1.8
1,826,181	-		IAI47_08645	0.83	+0.8
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