Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_01895 and IAI47_01900 are separated by 72 nucleotides IAI47_01900 and IAI47_01905 are separated by 93 nucleotides IAI47_01905 and IAI47_01910 are separated by 67 nucleotides
IAI47_01895: IAI47_01895 - 3-dehydroquinate synthase, at 415,309 to 416,397
_01895
IAI47_01900: IAI47_01900 - SPOR domain-containing protein, at 416,470 to 417,516
_01900
IAI47_01905: IAI47_01905 - adenine-specific DNA-methyltransferase, at 417,610 to 418,425
_01905
IAI47_01910: IAI47_01910 - ribulose-phosphate 3-epimerase, at 418,493 to 419,176
_01910
Position (kb) 416
417
418 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 416.401 kb on + strand at 416.401 kb on + strand at 416.401 kb on + strand at 416.455 kb on + strand at 417.177 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.268 kb on + strand, within IAI47_01900 at 417.270 kb on + strand, within IAI47_01900 at 417.270 kb on + strand, within IAI47_01900 at 417.270 kb on + strand, within IAI47_01900 at 417.270 kb on + strand, within IAI47_01900 at 417.270 kb on + strand, within IAI47_01900 at 417.366 kb on + strand, within IAI47_01900 at 417.382 kb on + strand, within IAI47_01900 at 417.382 kb on + strand, within IAI47_01900 at 417.382 kb on + strand, within IAI47_01900 at 417.382 kb on + strand, within IAI47_01900 at 417.403 kb on + strand, within IAI47_01900 at 417.403 kb on + strand, within IAI47_01900 at 417.455 kb on + strand at 417.455 kb on + strand at 417.455 kb on + strand at 417.455 kb on + strand at 417.455 kb on + strand at 417.455 kb on + strand at 417.476 kb on + strand at 417.587 kb on + strand at 417.587 kb on + strand at 417.587 kb on + strand at 417.587 kb on + strand at 417.594 kb on + strand at 417.594 kb on + strand at 417.594 kb on + strand at 417.594 kb on + strand at 417.594 kb on + strand at 417.594 kb on + strand at 417.597 kb on + strand at 417.597 kb on + strand at 417.597 kb on + strand at 417.597 kb on + strand at 417.597 kb on + strand at 418.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 remove 416,401 + +0.5 416,401 + -0.2 416,401 + -0.3 416,455 + -0.5 417,177 + IAI47_01900 0.68 +1.5 417,268 + IAI47_01900 0.76 -0.9 417,268 + IAI47_01900 0.76 +1.6 417,268 + IAI47_01900 0.76 +0.2 417,268 + IAI47_01900 0.76 -0.0 417,268 + IAI47_01900 0.76 -0.9 417,268 + IAI47_01900 0.76 +2.8 417,270 + IAI47_01900 0.76 +0.9 417,270 + IAI47_01900 0.76 +0.1 417,270 + IAI47_01900 0.76 -1.9 417,270 + IAI47_01900 0.76 +4.0 417,270 + IAI47_01900 0.76 +4.4 417,366 + IAI47_01900 0.86 -0.8 417,382 + IAI47_01900 0.87 +0.8 417,382 + IAI47_01900 0.87 +0.1 417,382 + IAI47_01900 0.87 +3.2 417,382 + IAI47_01900 0.87 +0.2 417,403 + IAI47_01900 0.89 +1.5 417,403 + IAI47_01900 0.89 +1.6 417,455 + -0.4 417,455 + +2.1 417,455 + -1.0 417,455 + -1.0 417,455 + -1.6 417,455 + -0.2 417,476 + -1.1 417,587 + +1.0 417,587 + -0.4 417,587 + +0.6 417,587 + -1.4 417,594 + -0.8 417,594 + +2.2 417,594 + +0.5 417,594 + -0.3 417,594 + -0.5 417,594 + +1.1 417,597 + +0.9 417,597 + +0.1 417,597 + -0.9 417,597 + -1.4 417,597 + +3.8 418,423 + -0.3
Or see this region's nucleotide sequence