Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4825

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
5,721,823	+		Psyr_4824	0.13	-0.6
5,721,842	+		Psyr_4824	0.15	-0.2
5,721,843	-		Psyr_4824	0.16	-0.1
5,721,886	+		Psyr_4824	0.20	-3.8
5,721,886	+		Psyr_4824	0.20	+0.3
5,721,887	-		Psyr_4824	0.20	+1.2
5,721,895	-		Psyr_4824	0.21	-0.7
5,721,895	-		Psyr_4824	0.21	+0.5
5,722,001	+		Psyr_4824	0.32	+1.5
5,722,001	+		Psyr_4824	0.32	-0.1
5,722,001	+		Psyr_4824	0.32	+0.2
5,722,001	+		Psyr_4824	0.32	+0.1
5,722,002	-		Psyr_4824	0.33	+0.1
5,722,002	-		Psyr_4824	0.33	+0.7
5,722,002	-		Psyr_4824	0.33	+1.5
5,722,002	-		Psyr_4824	0.33	+0.5
5,722,076	+		Psyr_4824	0.40	-2.5
5,722,076	+		Psyr_4824	0.40	+0.7
5,722,076	+		Psyr_4824	0.40	+0.5
5,722,076	+		Psyr_4824	0.40	-0.4
5,722,076	+		Psyr_4824	0.40	+1.9
5,722,076	+		Psyr_4824	0.40	+0.5
5,722,077	-		Psyr_4824	0.41	+1.9
5,722,077	-		Psyr_4824	0.41	+0.4
5,722,077	-		Psyr_4824	0.41	+1.2
5,722,079	+		Psyr_4824	0.41	-2.0
5,722,079	+		Psyr_4824	0.41	-2.0
5,722,079	+		Psyr_4824	0.41	+0.5
5,722,079	+		Psyr_4824	0.41	-0.1
5,722,080	-		Psyr_4824	0.41	-1.4
5,722,080	-		Psyr_4824	0.41	+1.3
5,722,152	-		Psyr_4824	0.49	-0.4
5,722,152	-		Psyr_4824	0.49	-1.3
5,722,165	-		Psyr_4824	0.50	+0.7
5,722,165	-		Psyr_4824	0.50	-2.0
5,722,212	+		Psyr_4824	0.55	+0.3
5,722,212	+		Psyr_4824	0.55	-1.3
5,722,212	+		Psyr_4824	0.55	+2.3
5,722,212	+		Psyr_4824	0.55	-1.4
5,722,213	-		Psyr_4824	0.55	+1.6
5,722,213	-		Psyr_4824	0.55	+1.3
5,722,213	-		Psyr_4824	0.55	+0.3
5,722,337	+		Psyr_4824	0.68	+0.0
5,722,337	+		Psyr_4824	0.68	-0.4
5,722,337	+		Psyr_4824	0.68	+0.0
5,722,338	-		Psyr_4824	0.68	-0.1
5,722,338	-		Psyr_4824	0.68	+0.3
5,722,338	-		Psyr_4824	0.68	+0.6
5,722,726	+				-0.8
5,722,727	-				+0.3
5,722,753	+				-2.0
5,722,753	+				-2.0
5,722,754	-				+0.6
5,722,754	-				+1.5
5,722,804	-				+0.3
5,722,804	-				+0.2
5,722,832	+				+0.2
5,722,833	-				+0.8
5,723,317	-		Psyr_4825	0.43	+1.3
5,723,317	-		Psyr_4825	0.43	-1.5
5,723,518	-		Psyr_4825	0.58	-1.7
5,723,518	-		Psyr_4825	0.58	+0.7
5,723,741	+		Psyr_4825	0.75	-0.3
5,723,742	-		Psyr_4825	0.75	-0.4
5,723,760	+		Psyr_4825	0.77	-1.1
5,723,760	+		Psyr_4825	0.77	+0.3
5,723,760	+		Psyr_4825	0.77	-0.3
5,723,760	+		Psyr_4825	0.77	-0.1
5,723,760	+		Psyr_4825	0.77	+2.3
5,723,760	+		Psyr_4825	0.77	-0.7
5,723,761	-		Psyr_4825	0.77	-0.4
5,723,761	-		Psyr_4825	0.77	+0.3
5,723,761	-		Psyr_4825	0.77	+0.9
5,723,761	-		Psyr_4825	0.77	-2.5
5,723,761	-		Psyr_4825	0.77	+0.0
5,723,761	-		Psyr_4825	0.77	+0.1
5,723,761	-		Psyr_4825	0.77	+0.3
5,723,761	-		Psyr_4825	0.77	+2.1
5,723,761	-		Psyr_4825	0.77	-0.7
5,723,791	+		Psyr_4825	0.79	+1.9
5,723,792	-		Psyr_4825	0.79	-3.8
5,724,070	+				+1.3
5,724,070	+				+0.1
5,724,070	+				-2.5
5,724,071	-				-0.9
5,724,071	-				+2.1
5,724,082	+				-0.5
5,724,082	+				-0.8
5,724,082	+				-0.8
5,724,136	+				+0.4
5,724,172	+				-2.7
5,724,172	+				-2.0
5,724,172	+				+1.9
5,724,172	+				+0.5
5,724,172	+				+0.0
5,724,172	+				-0.2
5,724,172	+				+0.5
5,724,172	+				+1.0
5,724,173	-				-0.6
5,724,173	-				+2.5
5,724,173	-				-0.5
5,724,173	-				-1.1
5,724,173	-				+1.3
5,724,173	-				-1.5
5,724,203	-				+2.9
5,724,256	+				+0.0
5,724,257	-				+3.3
5,724,257	-				-1.3
5,724,332	-		Psyr_4826	0.10	-0.0
5,724,332	-		Psyr_4826	0.10	+1.1
5,724,355	+		Psyr_4826	0.11	+1.9
5,724,355	+		Psyr_4826	0.11	+1.5
5,724,355	+		Psyr_4826	0.11	+0.6
5,724,403	+		Psyr_4826	0.13	-1.2
5,724,403	+		Psyr_4826	0.13	-0.5
5,724,404	-		Psyr_4826	0.13	-0.7
5,724,418	+		Psyr_4826	0.14	-0.1
5,724,418	+		Psyr_4826	0.14	-0.3
5,724,418	+		Psyr_4826	0.14	+0.9
5,724,418	+		Psyr_4826	0.14	+1.5
5,724,419	-		Psyr_4826	0.14	-1.0
5,724,419	-		Psyr_4826	0.14	+0.3
5,724,520	+		Psyr_4826	0.18	-3.3
5,724,521	-		Psyr_4826	0.18	+0.2
5,724,661	+		Psyr_4826	0.25	+0.7
5,724,661	+		Psyr_4826	0.25	-0.9
5,724,661	+		Psyr_4826	0.25	+1.1
5,724,661	+		Psyr_4826	0.25	+0.1
5,724,661	+		Psyr_4826	0.25	+0.1
5,724,662	-		Psyr_4826	0.25	-0.9
5,724,662	-		Psyr_4826	0.25	-2.5
5,724,662	-		Psyr_4826	0.25	+0.2
5,724,662	-		Psyr_4826	0.25	+0.3
5,724,662	-		Psyr_4826	0.25	+0.8
5,724,662	-		Psyr_4826	0.25	-2.1
5,724,670	+		Psyr_4826	0.25	+0.1
5,724,670	+		Psyr_4826	0.25	+0.1
5,724,671	-		Psyr_4826	0.25	-1.6
5,724,808	+		Psyr_4826	0.31	-0.7
5,724,808	+		Psyr_4826	0.31	+0.4
5,724,808	+		Psyr_4826	0.31	-1.9
5,724,808	+		Psyr_4826	0.31	-1.4
5,724,835	+		Psyr_4826	0.32	+1.7
5,724,836	-		Psyr_4826	0.32	+0.1
5,724,836	-		Psyr_4826	0.32	-0.4
5,724,844	+		Psyr_4826	0.33	+1.6
5,724,844	+		Psyr_4826	0.33	+0.9
5,724,844	+		Psyr_4826	0.33	+0.8
5,724,844	+		Psyr_4826	0.33	+1.0
5,724,844	+		Psyr_4826	0.33	-3.1
5,724,844	+		Psyr_4826	0.33	+0.0
5,724,844	+		Psyr_4826	0.33	+2.1
5,724,844	+		Psyr_4826	0.33	-1.5
5,724,844	+		Psyr_4826	0.33	-1.1
5,724,844	+		Psyr_4826	0.33	-1.3
5,724,845	-		Psyr_4826	0.33	-1.7
5,724,845	-		Psyr_4826	0.33	+0.3
5,724,845	-		Psyr_4826	0.33	-1.7
5,724,845	-		Psyr_4826	0.33	+1.2
5,724,845	-		Psyr_4826	0.33	+0.7
5,724,845	-		Psyr_4826	0.33	-1.1
5,724,845	-		Psyr_4826	0.33	-1.5
5,724,845	-		Psyr_4826	0.33	+0.5
5,724,845	-		Psyr_4826	0.33	-0.5
5,724,845	-		Psyr_4826	0.33	+0.3
5,724,845	-		Psyr_4826	0.33	+0.6
5,724,845	-		Psyr_4826	0.33	-0.3
5,724,845	-		Psyr_4826	0.33	-0.7
5,724,845	-		Psyr_4826	0.33	+0.5
5,724,845	-		Psyr_4826	0.33	-0.7
5,724,845	-		Psyr_4826	0.33	+0.8
5,724,845	-		Psyr_4826	0.33	-0.8
5,724,845	-		Psyr_4826	0.33	+1.2
5,724,985	+		Psyr_4826	0.39	-0.6
5,724,985	+		Psyr_4826	0.39	-1.5
5,724,986	-		Psyr_4826	0.39	-1.8
5,724,986	-		Psyr_4826	0.39	+0.8
5,724,986	-		Psyr_4826	0.39	-0.4
5,724,986	-		Psyr_4826	0.39	+0.6