Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4699 and Psyr_4700 are separated by 322 nucleotides Psyr_4700 and Psyr_4701 are separated by 66 nucleotides Psyr_4701 and Psyr_4702 are separated by 231 nucleotides
Psyr_4699: Psyr_4699 - Amino acid-binding ACT, at 5,568,229 to 5,568,771
_4699
Psyr_4700: Psyr_4700 - malate synthase, at 5,569,094 to 5,571,271
_4700
Psyr_4701: Psyr_4701 - Response regulator receiver, at 5,571,338 to 5,571,784
_4701
Psyr_4702: Psyr_4702 - Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase DUF294, at 5,572,016 to 5,573,950
_4702
Position (kb) 5569
5570
5571
5572 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5568.117 kb on + strand at 5568.117 kb on + strand at 5568.118 kb on - strand at 5568.195 kb on + strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.231 kb on - strand at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.755 kb on - strand at 5568.801 kb on - strand at 5568.801 kb on - strand at 5568.819 kb on + strand at 5568.819 kb on + strand at 5568.820 kb on - strand at 5568.825 kb on + strand at 5568.826 kb on - strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.867 kb on + strand at 5568.884 kb on + strand at 5568.922 kb on + strand at 5568.964 kb on + strand at 5568.964 kb on + strand at 5568.964 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.020 kb on - strand at 5569.020 kb on - strand at 5569.038 kb on + strand at 5569.038 kb on + strand at 5569.039 kb on - strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.104 kb on - strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.273 kb on - strand at 5569.334 kb on + strand, within Psyr_4700 at 5569.335 kb on - strand, within Psyr_4700 at 5569.508 kb on + strand, within Psyr_4700 at 5569.508 kb on + strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.573 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.721 kb on - strand, within Psyr_4700 at 5570.054 kb on + strand, within Psyr_4700 at 5570.054 kb on + strand, within Psyr_4700 at 5570.054 kb on + strand, within Psyr_4700 at 5570.054 kb on + strand, within Psyr_4700 at 5570.055 kb on - strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.343 kb on + strand, within Psyr_4700 at 5570.344 kb on - strand, within Psyr_4700 at 5570.359 kb on + strand, within Psyr_4700 at 5570.751 kb on - strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5571.269 kb on + strand at 5571.386 kb on - strand, within Psyr_4701 at 5571.808 kb on + strand at 5571.808 kb on + strand at 5571.823 kb on + strand at 5571.902 kb on - strand at 5571.902 kb on - strand at 5571.902 kb on - strand at 5571.902 kb on - strand at 5571.940 kb on + strand at 5571.940 kb on + strand at 5571.941 kb on - strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.139 kb on + strand at 5572.140 kb on - strand at 5572.170 kb on - strand at 5572.223 kb on + strand, within Psyr_4702 at 5572.223 kb on + strand, within Psyr_4702 at 5572.223 kb on + strand, within Psyr_4702 at 5572.223 kb on + strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 5,568,117 + -0.1 5,568,117 + +1.2 5,568,118 - -1.8 5,568,195 + -0.7 5,568,196 - +0.9 5,568,196 - -0.9 5,568,196 - -0.9 5,568,196 - +1.4 5,568,231 - +2.3 5,568,376 + Psyr_4699 0.27 +0.9 5,568,376 + Psyr_4699 0.27 +1.2 5,568,376 + Psyr_4699 0.27 -0.9 5,568,376 + Psyr_4699 0.27 -0.4 5,568,376 + Psyr_4699 0.27 -0.9 5,568,377 - Psyr_4699 0.27 -0.5 5,568,377 - Psyr_4699 0.27 +1.4 5,568,377 - Psyr_4699 0.27 +1.3 5,568,377 - Psyr_4699 0.27 +0.5 5,568,377 - Psyr_4699 0.27 -0.7 5,568,755 - +1.3 5,568,801 - +0.3 5,568,801 - +1.4 5,568,819 + -1.5 5,568,819 + -0.8 5,568,820 - +0.6 5,568,825 + +0.1 5,568,826 - -1.7 5,568,827 + +2.1 5,568,827 + +0.3 5,568,827 + -0.7 5,568,827 + -0.7 5,568,827 + +1.1 5,568,827 + +3.4 5,568,827 + -0.7 5,568,827 + -0.1 5,568,827 + -1.3 5,568,827 + -0.0 5,568,827 + -1.2 5,568,827 + -0.3 5,568,827 + +0.2 5,568,827 + -2.7 5,568,828 - -0.3 5,568,828 - +0.8 5,568,828 - +0.9 5,568,828 - +0.7 5,568,828 - +0.4 5,568,867 + -0.7 5,568,884 + +0.1 5,568,922 + +0.3 5,568,964 + -0.3 5,568,964 + -0.9 5,568,964 + +0.9 5,568,999 + +0.3 5,568,999 + +1.9 5,568,999 + +0.3 5,568,999 + -0.4 5,568,999 + +0.1 5,568,999 + -0.6 5,568,999 + +0.9 5,568,999 + -0.6 5,568,999 + +0.1 5,568,999 + -0.9 5,569,000 - -0.7 5,569,000 - -0.0 5,569,000 - +0.9 5,569,000 - +0.8 5,569,000 - -1.8 5,569,000 - +0.5 5,569,000 - +1.9 5,569,000 - -0.7 5,569,000 - +0.3 5,569,000 - +1.3 5,569,000 - +1.4 5,569,000 - +0.5 5,569,019 + +0.6 5,569,019 + +1.9 5,569,019 + +0.5 5,569,019 + +0.9 5,569,019 + -0.1 5,569,020 - +0.6 5,569,020 - +0.3 5,569,038 + -0.1 5,569,038 + +0.4 5,569,039 - +0.8 5,569,103 + -0.3 5,569,103 + +0.4 5,569,103 + -2.3 5,569,103 + -3.3 5,569,104 - +0.8 5,569,272 + +0.6 5,569,272 + -1.5 5,569,272 + -0.3 5,569,272 + -0.7 5,569,273 - +1.4 5,569,334 + Psyr_4700 0.11 -2.3 5,569,335 - Psyr_4700 0.11 -0.7 5,569,508 + Psyr_4700 0.19 +1.6 5,569,508 + Psyr_4700 0.19 +0.5 5,569,509 - Psyr_4700 0.19 -0.4 5,569,509 - Psyr_4700 0.19 -0.0 5,569,509 - Psyr_4700 0.19 +0.8 5,569,571 + Psyr_4700 0.22 -0.2 5,569,571 + Psyr_4700 0.22 +2.2 5,569,572 - Psyr_4700 0.22 +2.4 5,569,572 - Psyr_4700 0.22 -0.2 5,569,573 + Psyr_4700 0.22 +0.9 5,569,670 + Psyr_4700 0.26 +0.5 5,569,670 + Psyr_4700 0.26 +0.2 5,569,670 + Psyr_4700 0.26 +0.0 5,569,670 + Psyr_4700 0.26 +0.9 5,569,670 + Psyr_4700 0.26 +1.6 5,569,670 + Psyr_4700 0.26 +0.7 5,569,670 + Psyr_4700 0.26 +1.2 5,569,670 + Psyr_4700 0.26 +0.9 5,569,670 + Psyr_4700 0.26 -1.4 5,569,670 + Psyr_4700 0.26 +0.7 5,569,670 + Psyr_4700 0.26 -0.9 5,569,670 + Psyr_4700 0.26 +2.3 5,569,670 + Psyr_4700 0.26 -1.5 5,569,671 - Psyr_4700 0.26 -1.1 5,569,671 - Psyr_4700 0.26 -1.0 5,569,671 - Psyr_4700 0.26 -0.5 5,569,671 - Psyr_4700 0.26 +0.7 5,569,671 - Psyr_4700 0.26 +0.2 5,569,671 - Psyr_4700 0.26 -1.5 5,569,671 - Psyr_4700 0.26 +0.9 5,569,671 - Psyr_4700 0.26 +3.3 5,569,671 - Psyr_4700 0.26 +1.2 5,569,671 - Psyr_4700 0.26 +1.3 5,569,671 - Psyr_4700 0.26 +0.6 5,569,671 - Psyr_4700 0.26 +0.5 5,569,671 - Psyr_4700 0.26 +0.8 5,569,671 - Psyr_4700 0.26 -0.4 5,569,672 + Psyr_4700 0.27 -2.5 5,569,672 + Psyr_4700 0.27 +1.3 5,569,672 + Psyr_4700 0.27 -1.2 5,569,672 + Psyr_4700 0.27 +0.7 5,569,672 + Psyr_4700 0.27 -3.2 5,569,672 + Psyr_4700 0.27 +0.6 5,569,672 + Psyr_4700 0.27 +1.5 5,569,673 - Psyr_4700 0.27 -0.3 5,569,673 - Psyr_4700 0.27 +0.3 5,569,673 - Psyr_4700 0.27 +1.9 5,569,673 - Psyr_4700 0.27 +0.1 5,569,673 - Psyr_4700 0.27 +0.3 5,569,673 - Psyr_4700 0.27 -1.5 5,569,673 - Psyr_4700 0.27 -0.1 5,569,673 - Psyr_4700 0.27 +1.6 5,569,673 - Psyr_4700 0.27 +0.7 5,569,721 - Psyr_4700 0.29 -0.5 5,570,054 + Psyr_4700 0.44 -1.7 5,570,054 + Psyr_4700 0.44 -3.2 5,570,054 + Psyr_4700 0.44 -0.7 5,570,054 + Psyr_4700 0.44 -0.5 5,570,055 - Psyr_4700 0.44 -2.7 5,570,267 + Psyr_4700 0.54 +0.6 5,570,267 + Psyr_4700 0.54 +1.4 5,570,267 + Psyr_4700 0.54 -2.6 5,570,267 + Psyr_4700 0.54 +2.4 5,570,267 + Psyr_4700 0.54 +1.6 5,570,267 + Psyr_4700 0.54 +2.6 5,570,268 - Psyr_4700 0.54 -0.6 5,570,268 - Psyr_4700 0.54 +0.9 5,570,268 - Psyr_4700 0.54 +1.0 5,570,268 - Psyr_4700 0.54 +0.2 5,570,268 - Psyr_4700 0.54 +1.4 5,570,268 - Psyr_4700 0.54 -1.0 5,570,268 - Psyr_4700 0.54 +0.3 5,570,268 - Psyr_4700 0.54 +2.4 5,570,343 + Psyr_4700 0.57 +0.1 5,570,344 - Psyr_4700 0.57 -0.5 5,570,359 + Psyr_4700 0.58 +2.6 5,570,751 - Psyr_4700 0.76 -2.0 5,570,913 + Psyr_4700 0.84 +1.2 5,570,913 + Psyr_4700 0.84 +1.0 5,570,913 + Psyr_4700 0.84 -0.1 5,570,913 + Psyr_4700 0.84 +0.5 5,570,914 - Psyr_4700 0.84 +1.3 5,570,914 - Psyr_4700 0.84 -2.0 5,570,914 - Psyr_4700 0.84 +0.9 5,570,914 - Psyr_4700 0.84 +0.9 5,571,269 + -1.5 5,571,386 - Psyr_4701 0.11 +1.1 5,571,808 + -0.6 5,571,808 + -1.9 5,571,823 + -0.7 5,571,902 - +0.5 5,571,902 - -0.9 5,571,902 - -1.1 5,571,902 - +0.6 5,571,940 + +0.2 5,571,940 + -0.8 5,571,941 - -1.3 5,571,947 + -0.4 5,571,947 + +0.5 5,571,947 + +0.6 5,571,947 + +0.2 5,571,947 + -0.7 5,571,947 + +1.5 5,571,947 + +0.6 5,571,948 - -1.7 5,571,948 - -2.0 5,571,948 - -1.7 5,571,948 - -1.0 5,571,948 - +0.3 5,571,948 - +0.7 5,572,071 + -2.5 5,572,071 + -0.9 5,572,071 + +0.1 5,572,071 + -1.7 5,572,071 + +1.7 5,572,072 - +1.4 5,572,072 - +0.9 5,572,072 - +1.6 5,572,072 - +1.1 5,572,072 - +1.3 5,572,072 - +0.1 5,572,072 - -0.3 5,572,072 - -0.4 5,572,072 - +0.9 5,572,072 - +0.1 5,572,072 - +0.4 5,572,072 - -1.2 5,572,139 + +0.7 5,572,140 - -0.7 5,572,170 - -2.0 5,572,223 + Psyr_4702 0.11 +0.1 5,572,223 + Psyr_4702 0.11 +0.6 5,572,223 + Psyr_4702 0.11 +1.3 5,572,223 + Psyr_4702 0.11 -0.6 5,572,224 - Psyr_4702 0.11 +2.4 5,572,224 - Psyr_4702 0.11 +0.1 5,572,224 - Psyr_4702 0.11 -0.7 5,572,224 - Psyr_4702 0.11 +0.5 5,572,224 - Psyr_4702 0.11 +0.1 5,572,224 - Psyr_4702 0.11 -1.0 5,572,224 - Psyr_4702 0.11 +0.1
Or see this region's nucleotide sequence