Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4394

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
5,256,078	+		Psyr_4393	0.73	+0.0
5,256,078	+		Psyr_4393	0.73	+0.9
5,256,078	+		Psyr_4393	0.73	-1.4
5,256,078	+		Psyr_4393	0.73	+1.5
5,256,078	+		Psyr_4393	0.73	+0.2
5,256,079	-		Psyr_4393	0.73	-2.8
5,256,079	-		Psyr_4393	0.73	+0.5
5,256,079	-		Psyr_4393	0.73	-0.5
5,256,118	+		Psyr_4393	0.76	-0.8
5,256,320	+				-0.8
5,256,320	+				-3.2
5,256,320	+				+0.2
5,256,320	+				-0.3
5,256,320	+				-1.4
5,256,320	+				+2.5
5,256,320	+				-0.3
5,256,320	+				-2.7
5,256,320	+				+1.7
5,256,320	+				+0.3
5,256,320	+				+0.8
5,256,320	+				+0.6
5,256,320	+				-2.2
5,256,320	+				-0.0
5,256,320	+				+0.5
5,256,320	+				-0.3
5,256,320	+				-1.1
5,256,320	+				+0.6
5,256,320	+				-2.5
5,256,320	+				+1.0
5,256,320	+				-0.2
5,256,320	+				+0.5
5,256,320	+				+2.4
5,256,320	+				-0.6
5,256,320	+				-1.7
5,256,320	+				+0.3
5,256,320	+				+1.5
5,256,320	+				+0.2
5,256,320	+				-0.8
5,256,320	+				-1.1
5,256,320	+				-2.8
5,256,320	+				+0.7
5,256,320	+				+0.2
5,256,320	+				+0.1
5,256,321	-				+1.8
5,256,321	-				+0.7
5,256,321	-				+2.6
5,256,321	-				+1.6
5,256,321	-				+0.0
5,256,321	-				+0.2
5,256,321	-				-0.2
5,256,321	-				-1.2
5,256,321	-				-0.0
5,256,321	-				+1.0
5,256,321	-				-2.4
5,256,321	-				+1.4
5,256,321	-				+0.2
5,256,321	-				-0.3
5,256,321	-				+0.5
5,256,321	-				+0.0
5,256,321	-				+0.2
5,256,321	-				-0.3
5,256,321	-				+0.6
5,256,321	-				+1.0
5,256,321	-				-0.8
5,256,321	-				+1.2
5,256,321	-				+0.5
5,256,321	-				-0.0
5,256,321	-				-1.3
5,256,484	+				-1.8
5,256,506	+				-0.3
5,256,506	+				+1.2
5,256,507	-				+0.7
5,256,507	-				+2.0
5,256,671	+		Psyr_4394	0.26	-0.6
5,256,671	+		Psyr_4394	0.26	+0.3
5,256,672	-		Psyr_4394	0.26	+0.2
5,256,672	-		Psyr_4394	0.26	-1.4
5,256,685	-		Psyr_4394	0.28	-1.1
5,256,685	-		Psyr_4394	0.28	+0.4
5,256,776	+		Psyr_4394	0.38	+1.4
5,256,776	+		Psyr_4394	0.38	-0.3
5,256,939	+		Psyr_4394	0.56	-2.4
5,256,939	+		Psyr_4394	0.56	+0.6
5,256,939	+		Psyr_4394	0.56	-0.0
5,256,939	+		Psyr_4394	0.56	-0.8
5,256,939	+		Psyr_4394	0.56	+0.2
5,256,939	+		Psyr_4394	0.56	-0.1
5,256,939	+		Psyr_4394	0.56	+1.5
5,256,939	+		Psyr_4394	0.56	+1.5
5,256,940	-		Psyr_4394	0.56	-0.0
5,256,940	-		Psyr_4394	0.56	+0.2
5,256,940	-		Psyr_4394	0.56	+0.8
5,256,940	-		Psyr_4394	0.56	+0.8
5,256,940	-		Psyr_4394	0.56	+0.2
5,256,989	+		Psyr_4394	0.62	+0.2
5,256,989	+		Psyr_4394	0.62	+2.2
5,256,989	+		Psyr_4394	0.62	+1.1
5,256,989	+		Psyr_4394	0.62	-1.7
5,256,989	+		Psyr_4394	0.62	+0.6
5,256,989	+		Psyr_4394	0.62	+0.2
5,256,989	+		Psyr_4394	0.62	+2.0
5,256,990	-		Psyr_4394	0.62	-0.6
5,256,990	-		Psyr_4394	0.62	-1.5
5,256,990	-		Psyr_4394	0.62	+0.9
5,256,990	-		Psyr_4394	0.62	+0.8
5,256,990	-		Psyr_4394	0.62	+0.8
5,256,990	-		Psyr_4394	0.62	+1.2
5,256,990	-		Psyr_4394	0.62	-2.0
5,257,214	+		Psyr_4394	0.87	-1.4
5,257,214	+		Psyr_4394	0.87	-0.1
5,257,214	+		Psyr_4394	0.87	+1.2
5,257,214	+		Psyr_4394	0.87	-0.6
5,257,215	-		Psyr_4394	0.88	+1.6
5,257,215	-		Psyr_4394	0.88	+1.2
5,257,215	-		Psyr_4394	0.88	+1.7
5,257,215	-		Psyr_4394	0.88	-0.7
5,257,215	-		Psyr_4394	0.88	-1.4
5,257,225	+		Psyr_4394	0.89	+0.0
5,257,225	+		Psyr_4394	0.89	-0.7
5,257,225	+		Psyr_4394	0.89	+0.2
5,257,225	+		Psyr_4394	0.89	-0.7
5,257,225	+		Psyr_4394	0.89	-0.5
5,257,225	+		Psyr_4394	0.89	-0.3
5,257,225	+		Psyr_4394	0.89	-0.7
5,257,225	+		Psyr_4394	0.89	+0.2
5,257,225	+		Psyr_4394	0.89	-2.2
5,257,225	+		Psyr_4394	0.89	+0.2
5,257,225	+		Psyr_4394	0.89	-0.2
5,257,225	+		Psyr_4394	0.89	+0.2
5,257,225	+		Psyr_4394	0.89	-1.8
5,257,225	+		Psyr_4394	0.89	-2.3
5,257,225	+		Psyr_4394	0.89	-1.1
5,257,225	+		Psyr_4394	0.89	-0.1
5,257,225	+		Psyr_4394	0.89	+0.6
5,257,225	+		Psyr_4394	0.89	-0.8
5,257,225	+		Psyr_4394	0.89	-0.4
5,257,226	-		Psyr_4394	0.89	-1.4
5,257,226	-		Psyr_4394	0.89	-2.2
5,257,226	-		Psyr_4394	0.89	-0.7
5,257,226	-		Psyr_4394	0.89	-0.4
5,257,226	-		Psyr_4394	0.89	-2.4
5,257,226	-		Psyr_4394	0.89	-0.3
5,257,226	-		Psyr_4394	0.89	+0.3
5,257,226	-		Psyr_4394	0.89	+0.2
5,257,226	-		Psyr_4394	0.89	+0.3
5,257,226	-		Psyr_4394	0.89	+0.7
5,257,226	-		Psyr_4394	0.89	+0.6
5,257,226	-		Psyr_4394	0.89	-0.2
5,257,226	-		Psyr_4394	0.89	+1.1
5,257,226	-		Psyr_4394	0.89	-0.8
5,257,226	-		Psyr_4394	0.89	+0.1
5,257,226	-		Psyr_4394	0.89	-1.1
5,257,226	-		Psyr_4394	0.89	+0.9
5,257,226	-		Psyr_4394	0.89	-2.1
5,257,226	-		Psyr_4394	0.89	-0.5
5,257,226	-		Psyr_4394	0.89	-0.1
5,257,226	-		Psyr_4394	0.89	+0.8
5,257,226	-		Psyr_4394	0.89	-1.0
5,257,400	+				-0.7
5,257,400	+				+0.3
5,257,400	+				-1.6
5,257,401	-				+1.9
5,257,401	-				+0.0
5,257,401	-				-0.2
5,257,401	-				+0.2
5,257,401	-				+0.6
5,257,401	-				-1.4
5,257,401	-				-2.3
5,257,401	-				-0.3
5,257,403	+				+1.2
5,257,403	+				+1.1
5,257,404	-				-0.3
5,257,404	-				+1.3
5,257,404	-				+0.6
5,257,404	-				+2.0
5,257,535	-		Psyr_4395	0.24	-2.1
5,257,535	-		Psyr_4395	0.24	-0.3
5,257,535	-		Psyr_4395	0.24	+2.2
5,257,705	-		Psyr_4395	0.43	+1.2
5,257,705	-		Psyr_4395	0.43	+0.4
5,257,776	-		Psyr_4395	0.51	+0.2
5,258,091	+		Psyr_4395	0.86	+1.9
5,258,091	+		Psyr_4395	0.86	+1.6
5,258,091	+		Psyr_4395	0.86	-1.2
5,258,091	+		Psyr_4395	0.86	-2.2
5,258,092	-		Psyr_4395	0.87	+0.3
5,258,092	-		Psyr_4395	0.87	+1.1
5,258,092	-		Psyr_4395	0.87	+0.6
5,258,181	-				+0.2
5,258,181	-				+1.3
5,258,181	-				-2.2
5,258,188	+				+0.2
5,258,188	+				-1.1
5,258,189	-				+2.0
5,258,189	-				-2.5
5,258,189	-				+0.5
5,258,219	+				-1.8
5,258,219	+				-0.3
5,258,220	-				-0.8
5,258,220	-				+0.2
5,258,220	-				-0.3
5,258,220	-				-0.5
5,258,262	+				+0.6
5,258,262	+				-2.4
5,258,262	+				-1.4
5,258,263	-				+1.5
5,258,265	+				+0.5
5,258,265	+				-2.2
5,258,265	+				+0.2
5,258,265	+				-0.1
5,258,265	+				-1.7
5,258,266	-				+1.1