Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3816

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
4,537,854	+		Psyr_3815	0.88	+2.5
4,537,854	+		Psyr_3815	0.88	+1.0
4,537,891	-		Psyr_3815	0.89	-1.0
4,537,996	+				+1.8
4,537,996	+				+1.1
4,537,996	+				+1.5
4,537,996	+				+0.7
4,537,996	+				+0.8
4,537,996	+				+0.9
4,537,996	+				-1.4
4,537,996	+				+1.1
4,537,996	+				-1.3
4,537,996	+				+2.0
4,537,996	+				+0.6
4,537,996	+				-0.1
4,537,996	+				+1.4
4,537,996	+				+1.4
4,537,996	+				-0.0
4,537,997	-				+1.3
4,537,997	-				-0.9
4,537,997	-				-1.3
4,537,997	-				-3.0
4,537,997	-				-0.8
4,537,997	-				+0.3
4,537,997	-				+0.5
4,537,997	-				-1.0
4,537,997	-				+2.1
4,537,997	-				-0.0
4,537,997	-				-0.8
4,537,997	-				+0.2
4,537,997	-				-0.6
4,537,997	-				+1.4
4,537,997	-				-0.5
4,537,997	-				-0.2
4,537,997	-				+0.2
4,537,997	-				+0.8
4,537,997	-				-0.4
4,537,997	-				-2.4
4,537,997	-				-0.5
4,538,014	-				+0.6
4,538,076	-				-0.7
4,538,076	-				+0.3
4,538,076	-				+1.6
4,538,076	-				+1.1
4,538,076	-				-0.4
4,538,133	+				+1.4
4,538,133	+				-1.4
4,538,134	-				-1.0
4,538,134	-				+1.4
4,538,134	-				+0.3
4,538,134	-				+0.8
4,538,142	-				+0.5
4,538,162	+				+1.8
4,538,163	-				-1.4
4,538,163	-				-0.8
4,538,163	-				+0.7
4,538,211	+				-0.6
4,538,272	-				-1.0
4,538,346	+				-1.1
4,538,347	-				+0.1
4,538,347	-				+1.9
4,538,347	-				-0.1
4,538,371	-				-0.6
4,538,418	+				+3.3
4,538,433	+				-0.2
4,538,433	+				-1.0
4,538,434	-				+0.7
4,538,491	+				-1.2
4,538,491	+				-0.5
4,538,491	+				+0.7
4,538,491	+				-0.9
4,538,492	-				+0.2
4,538,492	-				+0.9
4,538,492	-				+1.5
4,538,492	-				-3.7
4,538,492	-				-0.7
4,538,492	-				-0.3
4,538,542	+				+0.7
4,538,543	-				-1.6
4,538,554	-				+1.8
4,538,557	-				+0.5
4,538,557	-				+1.8
4,538,557	-				-0.8
4,538,557	-				+1.2
4,538,557	-				+0.8
4,538,574	+				+2.2
4,538,574	+				+0.8
4,538,587	+				-0.8
4,538,587	+				-0.0
4,538,587	+				+0.7
4,538,587	+				+1.0
4,538,587	+				+1.2
4,538,587	+				-0.6
4,538,587	+				-0.5
4,538,587	+				-0.0
4,538,587	+				+1.1
4,538,587	+				-0.8
4,538,587	+				+0.6
4,538,587	+				+0.5
4,538,587	+				+0.3
4,538,587	+				-1.1
4,538,587	+				+0.5
4,538,587	+				-2.0
4,538,587	+				-1.0
4,538,587	+				-2.6
4,538,587	+				+0.5
4,538,587	+				-1.6
4,538,587	+				+2.5
4,538,588	-				+0.3
4,538,588	-				+1.3
4,538,588	-				-0.0
4,538,588	-				+0.2
4,538,588	-				+1.4
4,538,588	-				+2.1
4,538,588	-				-0.0
4,538,588	-				+0.6
4,538,588	-				-2.2
4,538,588	-				-1.0
4,538,588	-				+1.2
4,538,588	-				+1.8
4,538,588	-				+0.4
4,538,588	-				+0.1
4,538,588	-				-3.0
4,538,596	+				-1.8
4,538,596	+				-1.0
4,538,597	-				-2.4
4,538,597	-				-0.2
4,538,626	+				-0.6
4,538,634	+				-0.5
4,538,634	+				+1.5
4,538,634	+				+0.8
4,538,635	-				-0.4
4,538,635	-				+0.2
4,538,635	-				+1.5
4,538,659	+				+0.3
4,538,705	-				+0.4
4,538,752	+				+0.6
4,538,752	+				+1.1
4,538,753	-				+1.1
4,538,753	-				+2.1
4,538,753	-				-1.0
4,538,753	-				-1.0
4,538,754	+				-0.9
4,538,754	+				+1.4
4,538,754	+				+0.5
4,538,755	-				-0.2
4,538,770	-				-0.6
4,538,784	-				+0.8
4,538,784	-				-3.7
4,538,784	-				-1.0
4,538,784	-				+1.1
4,538,872	-				-0.0
4,538,973	-				-1.6
4,538,983	+				-0.0
4,538,983	+				+2.3
4,539,026	+				+1.6
4,539,027	-				+0.1
4,539,027	-				-0.4
4,539,095	-		Psyr_3816	0.11	+1.0
4,539,169	+		Psyr_3816	0.14	+1.2
4,539,170	-		Psyr_3816	0.15	+0.9
4,539,170	-		Psyr_3816	0.15	-0.0
4,539,170	-		Psyr_3816	0.15	+0.6
4,539,171	+		Psyr_3816	0.15	+1.5
4,539,171	+		Psyr_3816	0.15	-1.4
4,539,171	+		Psyr_3816	0.15	+2.5
4,539,172	-		Psyr_3816	0.15	+1.1
4,539,172	-		Psyr_3816	0.15	+1.5
4,539,172	-		Psyr_3816	0.15	+1.1
4,539,220	+		Psyr_3816	0.17	-0.0
4,539,221	-		Psyr_3816	0.17	-0.2
4,539,221	-		Psyr_3816	0.17	+1.8
4,539,325	-		Psyr_3816	0.21	+0.3
4,539,430	-		Psyr_3816	0.26	+1.6
4,539,431	+		Psyr_3816	0.26	+2.1
4,539,431	+		Psyr_3816	0.26	-0.0
4,539,432	-		Psyr_3816	0.26	+0.4
4,539,432	-		Psyr_3816	0.26	-0.8
4,539,435	+		Psyr_3816	0.26	-0.0
4,539,435	+		Psyr_3816	0.26	-2.4
4,539,436	-		Psyr_3816	0.26	+0.2
4,539,436	-		Psyr_3816	0.26	-1.1
4,539,469	+		Psyr_3816	0.28	-1.8
4,539,470	-		Psyr_3816	0.28	-2.0
4,539,473	+		Psyr_3816	0.28	+1.4
4,539,499	-		Psyr_3816	0.29	+1.5
4,539,499	-		Psyr_3816	0.29	-1.1
4,539,554	+		Psyr_3816	0.31	+1.5
4,539,555	-		Psyr_3816	0.32	-0.0
4,539,580	-		Psyr_3816	0.33	+0.7
4,539,583	-		Psyr_3816	0.33	+1.0
4,539,664	+		Psyr_3816	0.36	-0.2
4,539,664	+		Psyr_3816	0.36	+1.3
4,539,664	+		Psyr_3816	0.36	+0.4
4,539,665	-		Psyr_3816	0.36	-0.0
4,539,751	-		Psyr_3816	0.40	+1.0
4,539,765	-		Psyr_3816	0.41	+1.8
4,539,843	-		Psyr_3816	0.44	+1.4
4,539,850	-		Psyr_3816	0.45	-0.0
4,539,877	+		Psyr_3816	0.46	+0.9
4,539,877	+		Psyr_3816	0.46	-0.1
4,539,878	-		Psyr_3816	0.46	-0.3
4,539,882	+		Psyr_3816	0.46	-0.2
4,539,915	-		Psyr_3816	0.47	-0.0
4,539,973	+		Psyr_3816	0.50	-3.6
4,539,988	+		Psyr_3816	0.51	+0.5
4,539,989	-		Psyr_3816	0.51	+0.4
4,540,079	-		Psyr_3816	0.55	+1.4
4,540,079	-		Psyr_3816	0.55	+1.2
4,540,079	-		Psyr_3816	0.55	-1.0
4,540,079	-		Psyr_3816	0.55	-1.0
4,540,079	-		Psyr_3816	0.55	-0.0
4,540,081	-		Psyr_3816	0.55	+1.0
4,540,298	+		Psyr_3816	0.64	+1.4
4,540,377	-		Psyr_3816	0.68	-0.8
4,540,438	-		Psyr_3816	0.71	+1.2
4,540,438	-		Psyr_3816	0.71	+1.1
4,540,492	+		Psyr_3816	0.73	+0.4
4,540,519	+		Psyr_3816	0.74	-2.0
4,540,519	+		Psyr_3816	0.74	-2.2
4,540,520	-		Psyr_3816	0.74	+0.0
4,540,530	+		Psyr_3816	0.75	+0.1
4,540,531	-		Psyr_3816	0.75	+2.0
4,540,531	-		Psyr_3816	0.75	-1.4
4,540,531	-		Psyr_3816	0.75	-0.9
4,540,531	-		Psyr_3816	0.75	+0.1
4,540,546	+		Psyr_3816	0.75	+1.0
4,540,546	+		Psyr_3816	0.75	+0.4
4,540,547	-		Psyr_3816	0.75	-0.6
4,540,637	-		Psyr_3816	0.79	+1.2
4,540,663	-		Psyr_3816	0.81	-0.0
4,540,677	+		Psyr_3816	0.81	+0.4
4,540,678	-		Psyr_3816	0.81	+1.8
4,540,678	-		Psyr_3816	0.81	-2.7
4,540,717	-		Psyr_3816	0.83	-0.0
4,540,737	+		Psyr_3816	0.84	+0.8
4,540,737	+		Psyr_3816	0.84	+1.3
4,540,737	+		Psyr_3816	0.84	+1.7
4,540,758	+		Psyr_3816	0.85	+0.3
4,540,758	+		Psyr_3816	0.85	-3.5
4,540,758	+		Psyr_3816	0.85	+0.3
4,540,758	+		Psyr_3816	0.85	+0.7
4,540,758	+		Psyr_3816	0.85	-0.0
4,540,758	+		Psyr_3816	0.85	+1.7
4,540,758	+		Psyr_3816	0.85	-0.6
4,540,798	+		Psyr_3816	0.86	-0.0
4,540,840	+		Psyr_3816	0.88	+0.9
4,540,871	+		Psyr_3816	0.90	+0.4
4,540,871	+		Psyr_3816	0.90	-1.3
4,540,871	+		Psyr_3816	0.90	+1.7
4,540,872	-		Psyr_3816	0.90	-0.5
4,540,872	-		Psyr_3816	0.90	+0.8
4,540,884	+				-2.2
4,540,950	+				-1.6
4,540,950	+				+1.5
4,540,950	+				-0.1
4,540,950	+				+1.0
4,540,950	+				-1.0
4,540,950	+				-0.4
4,540,951	-				+1.5
4,540,951	-				+1.2
4,540,951	-				+0.0
4,541,061	+				+0.3
4,541,065	+				-0.0
4,541,065	+				+0.9
4,541,066	-				+1.2
4,541,066	-				+1.9
4,541,103	+				+0.4
4,541,103	+				+1.0
4,541,104	-				-0.8
4,541,105	+				+0.2
4,541,105	+				+0.2
4,541,105	+				-0.9
4,541,105	+				-0.0
4,541,105	+				-1.0
4,541,105	+				-1.0
4,541,105	+				-2.6
4,541,105	+				+2.1
4,541,105	+				-0.4
4,541,105	+				-0.0
4,541,106	-				-0.7
4,541,106	-				+1.0
4,541,106	-				-0.2
4,541,106	-				-0.8
4,541,106	-				-2.5
4,541,106	-				+1.3
4,541,106	-				-0.4
4,541,106	-				+0.2
4,541,106	-				+1.0
4,541,106	-				-2.0
4,541,106	-				+1.2
4,541,127	+				+1.5
4,541,127	+				+1.0
4,541,199	-				+1.0
4,541,199	-				+0.5
4,541,236	+				+1.8
4,541,239	+				+1.0
4,541,239	+				-0.3
4,541,240	-				-0.0
4,541,240	-				+1.5
4,541,240	-				+1.5
4,541,240	-				+2.3
4,541,240	-				-1.4
4,541,240	-				-1.5
4,541,309	+				+1.7
4,541,349	-		Psyr_3817	0.12	-1.0
4,541,583	+		Psyr_3817	0.28	-0.5
4,541,583	+		Psyr_3817	0.28	-1.6
4,541,583	+		Psyr_3817	0.28	+1.1
4,541,583	+		Psyr_3817	0.28	-0.3
4,541,583	+		Psyr_3817	0.28	+1.5
4,541,584	-		Psyr_3817	0.28	+0.1
4,541,584	-		Psyr_3817	0.28	+1.3
4,541,584	-		Psyr_3817	0.28	+0.7
4,541,602	+		Psyr_3817	0.30	+1.4
4,541,602	+		Psyr_3817	0.30	-1.8
4,541,603	-		Psyr_3817	0.30	-0.0
4,541,603	-		Psyr_3817	0.30	+1.6
4,541,603	-		Psyr_3817	0.30	-0.0
4,541,603	-		Psyr_3817	0.30	+0.7
4,541,603	-		Psyr_3817	0.30	-0.9
4,541,603	-		Psyr_3817	0.30	+1.3
4,541,603	-		Psyr_3817	0.30	+0.8
4,541,603	-		Psyr_3817	0.30	-0.5
4,541,610	-		Psyr_3817	0.30	-0.7
4,541,677	-		Psyr_3817	0.35	-3.0
4,541,710	+		Psyr_3817	0.37	-0.4
4,541,710	+		Psyr_3817	0.37	-0.2
4,541,772	+		Psyr_3817	0.42	-1.0
4,541,772	+		Psyr_3817	0.42	+0.4
4,541,772	+		Psyr_3817	0.42	-2.0
4,541,773	-		Psyr_3817	0.42	-0.4
4,541,773	-		Psyr_3817	0.42	-0.6
4,541,773	-		Psyr_3817	0.42	-0.6
4,541,775	+		Psyr_3817	0.42	+1.4
4,541,775	+		Psyr_3817	0.42	-1.4
4,541,776	-		Psyr_3817	0.42	+1.8
4,541,778	+		Psyr_3817	0.42	+1.0
4,541,778	+		Psyr_3817	0.42	+0.6
4,541,778	+		Psyr_3817	0.42	+1.2
4,541,778	+		Psyr_3817	0.42	-0.0
4,541,778	+		Psyr_3817	0.42	-1.0
4,541,778	+		Psyr_3817	0.42	+1.0
4,541,778	+		Psyr_3817	0.42	+0.3
4,541,779	-		Psyr_3817	0.42	+0.8
4,541,779	-		Psyr_3817	0.42	+0.9
4,541,779	-		Psyr_3817	0.42	-0.5
4,541,779	-		Psyr_3817	0.42	-0.8
4,541,779	-		Psyr_3817	0.42	-0.5
4,541,779	-		Psyr_3817	0.42	-1.3
4,541,779	-		Psyr_3817	0.42	-2.6
4,541,779	-		Psyr_3817	0.42	+2.0
4,541,779	-		Psyr_3817	0.42	+0.4
4,541,783	-		Psyr_3817	0.42	-2.6
4,541,793	+		Psyr_3817	0.43	+1.0
4,542,044	+		Psyr_3817	0.61	-0.4
4,542,044	+		Psyr_3817	0.61	+0.5
4,542,044	+		Psyr_3817	0.61	+1.5
4,542,044	+		Psyr_3817	0.61	+3.1
4,542,044	+		Psyr_3817	0.61	-1.6
4,542,044	+		Psyr_3817	0.61	+0.9
4,542,044	+		Psyr_3817	0.61	+2.2
4,542,044	+		Psyr_3817	0.61	+1.6
4,542,044	+		Psyr_3817	0.61	-0.0
4,542,044	+		Psyr_3817	0.61	+0.8
4,542,044	+		Psyr_3817	0.61	+1.0
4,542,044	+		Psyr_3817	0.61	-1.6
4,542,044	+		Psyr_3817	0.61	+0.8
4,542,045	-		Psyr_3817	0.61	-0.2
4,542,045	-		Psyr_3817	0.61	+1.0
4,542,045	-		Psyr_3817	0.61	-0.8
4,542,045	-		Psyr_3817	0.61	+0.3
4,542,045	-		Psyr_3817	0.61	-0.0
4,542,045	-		Psyr_3817	0.61	-0.2
4,542,045	-		Psyr_3817	0.61	-1.5
4,542,045	-		Psyr_3817	0.61	+0.5
4,542,045	-		Psyr_3817	0.61	+0.5
4,542,045	-		Psyr_3817	0.61	+1.0
4,542,045	-		Psyr_3817	0.61	+1.7
4,542,045	-		Psyr_3817	0.61	+0.6
4,542,045	-		Psyr_3817	0.61	+0.2