Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3765

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
4,482,462	+		Psyr_3764	0.12	+1.5
4,482,529	+		Psyr_3764	0.20	+2.5
4,482,529	+		Psyr_3764	0.20	+3.8
4,482,529	+		Psyr_3764	0.20	-0.1
4,482,530	-		Psyr_3764	0.20	+1.5
4,482,530	-		Psyr_3764	0.20	+0.1
4,482,552	+		Psyr_3764	0.22	+1.5
4,482,552	+		Psyr_3764	0.22	-0.1
4,482,553	-		Psyr_3764	0.23	+3.8
4,482,553	-		Psyr_3764	0.23	-0.3
4,482,553	-		Psyr_3764	0.23	-0.1
4,482,553	-		Psyr_3764	0.23	-0.5
4,482,553	-		Psyr_3764	0.23	-2.4
4,482,553	-		Psyr_3764	0.23	-1.0
4,482,553	-		Psyr_3764	0.23	+0.0
4,482,553	-		Psyr_3764	0.23	+1.6
4,482,556	+		Psyr_3764	0.23	-0.9
4,482,556	+		Psyr_3764	0.23	+0.2
4,482,557	-		Psyr_3764	0.23	+0.6
4,482,557	-		Psyr_3764	0.23	+2.5
4,482,557	-		Psyr_3764	0.23	+1.4
4,482,557	-		Psyr_3764	0.23	+1.8
4,482,575	+		Psyr_3764	0.25	-0.1
4,482,576	-		Psyr_3764	0.25	+1.9
4,482,576	-		Psyr_3764	0.25	-0.1
4,482,576	-		Psyr_3764	0.25	-1.6
4,482,576	-		Psyr_3764	0.25	+2.9
4,482,576	-		Psyr_3764	0.25	-1.1
4,482,576	-		Psyr_3764	0.25	-0.2
4,482,576	-		Psyr_3764	0.25	-1.4
4,482,577	+		Psyr_3764	0.25	-1.1
4,482,577	+		Psyr_3764	0.25	+2.3
4,482,577	+		Psyr_3764	0.25	-3.2
4,482,577	+		Psyr_3764	0.25	-0.1
4,482,577	+		Psyr_3764	0.25	-0.6
4,482,577	+		Psyr_3764	0.25	-1.4
4,482,578	-		Psyr_3764	0.25	+0.1
4,482,578	-		Psyr_3764	0.25	+0.8
4,482,578	-		Psyr_3764	0.25	-2.9
4,482,578	-		Psyr_3764	0.25	+0.8
4,482,578	-		Psyr_3764	0.25	-1.1
4,482,578	-		Psyr_3764	0.25	-0.4
4,482,582	-		Psyr_3764	0.26	-0.8
4,482,663	-		Psyr_3764	0.35	+0.2
4,482,672	+		Psyr_3764	0.36	+0.7
4,482,683	-		Psyr_3764	0.37	+0.4
4,482,755	+		Psyr_3764	0.46	+0.1
4,482,755	+		Psyr_3764	0.46	+0.3
4,482,755	+		Psyr_3764	0.46	-0.1
4,482,755	+		Psyr_3764	0.46	-1.9
4,482,755	+		Psyr_3764	0.46	+0.5
4,482,755	+		Psyr_3764	0.46	+0.8
4,482,756	-		Psyr_3764	0.46	-1.1
4,482,756	-		Psyr_3764	0.46	+1.5
4,482,756	-		Psyr_3764	0.46	+2.9
4,482,756	-		Psyr_3764	0.46	+0.9
4,482,756	-		Psyr_3764	0.46	+0.4
4,482,756	-		Psyr_3764	0.46	-0.9
4,482,785	+		Psyr_3764	0.49	-2.1
4,482,786	-		Psyr_3764	0.49	+1.4
4,482,820	+		Psyr_3764	0.53	-1.5
4,482,820	+		Psyr_3764	0.53	+0.4
4,482,820	+		Psyr_3764	0.53	+3.1
4,482,821	-		Psyr_3764	0.53	+0.3
4,482,821	-		Psyr_3764	0.53	-2.4
4,482,821	-		Psyr_3764	0.53	-1.1
4,482,821	-		Psyr_3764	0.53	+0.7
4,482,821	-		Psyr_3764	0.53	+0.5
4,482,850	-		Psyr_3764	0.57	+0.5
4,482,850	-		Psyr_3764	0.57	+1.4
4,482,872	+		Psyr_3764	0.59	+1.5
4,482,872	+		Psyr_3764	0.59	-0.5
4,482,872	+		Psyr_3764	0.59	-0.6
4,482,872	+		Psyr_3764	0.59	-0.1
4,482,872	+		Psyr_3764	0.59	-0.1
4,482,872	+		Psyr_3764	0.59	+0.9
4,482,872	+		Psyr_3764	0.59	+2.3
4,482,873	-		Psyr_3764	0.59	+0.8
4,482,873	-		Psyr_3764	0.59	-0.1
4,482,873	-		Psyr_3764	0.59	+2.3
4,482,873	-		Psyr_3764	0.59	-0.3
4,482,873	-		Psyr_3764	0.59	+0.8
4,482,873	-		Psyr_3764	0.59	+0.9
4,482,873	-		Psyr_3764	0.59	-0.3
4,482,873	-		Psyr_3764	0.59	+2.4
4,482,874	+		Psyr_3764	0.59	+0.1
4,482,875	-		Psyr_3764	0.60	+0.6
4,482,875	-		Psyr_3764	0.60	+0.2
4,482,875	-		Psyr_3764	0.60	-1.4
4,482,875	-		Psyr_3764	0.60	+0.2
4,482,875	-		Psyr_3764	0.60	+3.1
4,482,875	-		Psyr_3764	0.60	+1.1
4,482,907	+		Psyr_3764	0.63	+0.4
4,482,907	+		Psyr_3764	0.63	-0.1
4,482,908	-		Psyr_3764	0.63	+1.4
4,482,944	-		Psyr_3764	0.67	+0.1
4,482,979	-		Psyr_3764	0.71	-1.4
4,483,062	+		Psyr_3764	0.81	+1.5
4,483,063	-		Psyr_3764	0.81	+0.5
4,483,169	+				-0.5
4,483,169	+				-0.2
4,483,170	-				-0.5
4,483,215	+				+0.3
4,483,215	+				+0.7
4,483,215	+				-1.1
4,483,216	-				+1.9
4,483,216	-				-0.8
4,483,286	-				+1.6
4,483,286	-				+0.6
4,483,291	-				+0.4
4,483,379	-		Psyr_3765	0.23	+2.1
4,483,379	-		Psyr_3765	0.23	+0.9
4,483,382	+		Psyr_3765	0.23	-1.9
4,483,382	+		Psyr_3765	0.23	+0.9
4,483,382	+		Psyr_3765	0.23	-0.6
4,483,383	-		Psyr_3765	0.23	+2.7
4,483,383	-		Psyr_3765	0.23	-0.1
4,483,383	-		Psyr_3765	0.23	+0.7
4,483,383	-		Psyr_3765	0.23	+1.3
4,483,433	+		Psyr_3765	0.35	+1.1
4,483,433	+		Psyr_3765	0.35	+0.2
4,483,433	+		Psyr_3765	0.35	-0.8
4,483,433	+		Psyr_3765	0.35	+0.7
4,483,434	-		Psyr_3765	0.35	+1.2
4,483,439	+		Psyr_3765	0.36	+3.3
4,483,439	+		Psyr_3765	0.36	-0.1
4,483,439	+		Psyr_3765	0.36	-2.4
4,483,439	+		Psyr_3765	0.36	-1.9
4,483,439	+		Psyr_3765	0.36	+2.2
4,483,439	+		Psyr_3765	0.36	+0.5
4,483,439	+		Psyr_3765	0.36	+0.9
4,483,440	-		Psyr_3765	0.37	-1.6
4,483,440	-		Psyr_3765	0.37	-0.1
4,483,440	-		Psyr_3765	0.37	+1.4
4,483,440	-		Psyr_3765	0.37	+1.1
4,483,440	-		Psyr_3765	0.37	+3.9
4,483,440	-		Psyr_3765	0.37	+0.3
4,483,440	-		Psyr_3765	0.37	+1.3
4,483,456	-		Psyr_3765	0.40	+0.3
4,483,568	-		Psyr_3765	0.66	+0.8
4,483,622	+		Psyr_3765	0.78	-0.5
4,483,654	+		Psyr_3765	0.86	+0.6
4,483,734	+				+0.2
4,483,740	+				+0.2
4,483,795	-				-1.1
4,483,984	+				-1.1
4,483,984	+				+1.5
4,483,984	+				-0.2
4,484,002	+		Psyr_3766	0.11	+1.0
4,484,034	+		Psyr_3766	0.16	+1.4
4,484,034	+		Psyr_3766	0.16	+2.4
4,484,035	-		Psyr_3766	0.16	+0.3
4,484,091	+		Psyr_3766	0.23	-0.3
4,484,092	-		Psyr_3766	0.24	+0.4
4,484,092	-		Psyr_3766	0.24	-0.1
4,484,199	+		Psyr_3766	0.38	-0.5
4,484,199	+		Psyr_3766	0.38	+0.5
4,484,199	+		Psyr_3766	0.38	+0.5
4,484,199	+		Psyr_3766	0.38	-1.8
4,484,200	-		Psyr_3766	0.38	-2.4
4,484,200	-		Psyr_3766	0.38	-0.1
4,484,236	+		Psyr_3766	0.43	-1.6
4,484,237	-		Psyr_3766	0.43	+1.5
4,484,239	-		Psyr_3766	0.44	+0.5
4,484,363	+		Psyr_3766	0.61	-0.5
4,484,363	+		Psyr_3766	0.61	+0.1
4,484,572	+		Psyr_3766	0.89	-1.5
4,484,572	+		Psyr_3766	0.89	-1.4
4,484,573	-		Psyr_3766	0.89	+0.3
4,484,575	+		Psyr_3766	0.90	+0.9
4,484,576	-		Psyr_3766	0.90	-3.4
4,484,576	-		Psyr_3766	0.90	-3.4