Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1083

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
1,223,521	+		Psyr_1081	0.60	+0.1
1,223,521	+		Psyr_1081	0.60	-0.9
1,223,521	+		Psyr_1081	0.60	-2.5
1,223,521	+		Psyr_1081	0.60	+0.3
1,223,521	+		Psyr_1081	0.60	+1.6
1,223,521	+		Psyr_1081	0.60	+1.0
1,223,521	+		Psyr_1081	0.60	-0.3
1,223,521	+		Psyr_1081	0.60	-2.5
1,223,521	+		Psyr_1081	0.60	-2.3
1,223,521	+		Psyr_1081	0.60	-0.9
1,223,522	-		Psyr_1081	0.60	+1.9
1,223,522	-		Psyr_1081	0.60	-0.8
1,223,522	-		Psyr_1081	0.60	+2.4
1,223,522	-		Psyr_1081	0.60	+0.8
1,223,522	-		Psyr_1081	0.60	-0.9
1,223,522	-		Psyr_1081	0.60	-3.4
1,223,522	-		Psyr_1081	0.60	+0.6
1,223,522	-		Psyr_1081	0.60	+1.1
1,223,522	-		Psyr_1081	0.60	-0.5
1,223,573	+		Psyr_1081	0.66	+0.1
1,223,790	+		Psyr_1081	0.89	+0.3
1,223,853	+				+1.3
1,223,853	+				+0.7
1,223,853	+				-0.7
1,223,853	+				+1.9
1,223,853	+				-0.5
1,223,853	+				+0.7
1,223,853	+				-0.3
1,223,853	+				-2.3
1,223,854	-				-0.3
1,223,854	-				+1.4
1,223,957	-				-2.3
1,224,052	+		Psyr_1082	0.28	-0.9
1,224,052	+		Psyr_1082	0.28	-0.8
1,224,052	+		Psyr_1082	0.28	+0.9
1,224,052	+		Psyr_1082	0.28	-0.5
1,224,163	+		Psyr_1082	0.59	+0.9
1,224,163	+		Psyr_1082	0.59	-1.5
1,224,163	+		Psyr_1082	0.59	+2.9
1,224,163	+		Psyr_1082	0.59	+0.1
1,224,163	+		Psyr_1082	0.59	+0.2
1,224,163	+		Psyr_1082	0.59	+0.6
1,224,163	+		Psyr_1082	0.59	+1.4
1,224,163	+		Psyr_1082	0.59	-0.8
1,224,163	+		Psyr_1082	0.59	-2.5
1,224,164	-		Psyr_1082	0.60	+1.4
1,224,164	-		Psyr_1082	0.60	+0.1
1,224,164	-		Psyr_1082	0.60	-1.9
1,224,164	-		Psyr_1082	0.60	+0.5
1,224,164	-		Psyr_1082	0.60	-1.9
1,224,164	-		Psyr_1082	0.60	+0.1
1,224,164	-		Psyr_1082	0.60	-1.3
1,224,164	-		Psyr_1082	0.60	-0.6
1,224,164	-		Psyr_1082	0.60	+1.9
1,224,187	+		Psyr_1082	0.66	+1.0
1,224,188	-		Psyr_1082	0.66	+1.7
1,224,188	-		Psyr_1082	0.66	-0.1
1,224,188	-		Psyr_1082	0.66	+1.4
1,224,188	-		Psyr_1082	0.66	+0.6
1,224,251	-		Psyr_1082	0.84	+0.3
1,224,384	+				-2.0
1,224,385	-				+0.7
1,224,531	+		Psyr_1083	0.22	+1.4
1,224,531	+		Psyr_1083	0.22	+2.1
1,224,531	+		Psyr_1083	0.22	-1.9
1,224,531	+		Psyr_1083	0.22	+0.2
1,224,532	-		Psyr_1083	0.22	-3.5
1,224,532	-		Psyr_1083	0.22	+0.4
1,224,532	-		Psyr_1083	0.22	-0.1
1,224,532	-		Psyr_1083	0.22	+1.1
1,224,532	-		Psyr_1083	0.22	+0.1
1,224,532	-		Psyr_1083	0.22	+0.7
1,224,807	+		Psyr_1083	0.50	+1.2
1,224,807	+		Psyr_1083	0.50	+0.1
1,224,807	+		Psyr_1083	0.50	+1.3
1,224,807	+		Psyr_1083	0.50	+1.9
1,224,807	+		Psyr_1083	0.50	+0.9
1,224,807	+		Psyr_1083	0.50	-0.9
1,224,807	+		Psyr_1083	0.50	-1.8
1,224,807	+		Psyr_1083	0.50	-1.5
1,224,807	+		Psyr_1083	0.50	+0.1
1,224,807	+		Psyr_1083	0.50	+1.2
1,224,807	+		Psyr_1083	0.50	-2.9
1,224,808	-		Psyr_1083	0.50	+0.6
1,224,808	-		Psyr_1083	0.50	+0.7
1,224,808	-		Psyr_1083	0.50	+0.1
1,224,808	-		Psyr_1083	0.50	+1.4
1,224,808	-		Psyr_1083	0.50	+0.3
1,224,808	-		Psyr_1083	0.50	+1.0
1,224,808	-		Psyr_1083	0.50	+0.9
1,224,808	-		Psyr_1083	0.50	+1.0
1,224,808	-		Psyr_1083	0.50	+1.7
1,224,808	-		Psyr_1083	0.50	+2.4
1,224,808	-		Psyr_1083	0.50	-1.5
1,224,808	-		Psyr_1083	0.50	-0.3
1,224,844	+		Psyr_1083	0.53	+2.1
1,224,845	-		Psyr_1083	0.53	+0.3
1,224,961	-		Psyr_1083	0.65	+0.8
1,224,982	-		Psyr_1083	0.67	+0.1
1,225,093	+		Psyr_1083	0.78	-1.5
1,225,093	+		Psyr_1083	0.78	+1.3
1,225,093	+		Psyr_1083	0.78	-1.5
1,225,095	+		Psyr_1083	0.78	+1.2
1,225,095	+		Psyr_1083	0.78	+0.6
1,225,095	+		Psyr_1083	0.78	+2.1
1,225,095	+		Psyr_1083	0.78	+0.4
1,225,095	+		Psyr_1083	0.78	+0.3
1,225,095	+		Psyr_1083	0.78	+2.4
1,225,096	-		Psyr_1083	0.78	+0.2
1,225,096	-		Psyr_1083	0.78	-0.7
1,225,096	-		Psyr_1083	0.78	+1.1
1,225,096	-		Psyr_1083	0.78	+1.1
1,225,096	-		Psyr_1083	0.78	-1.7
1,225,096	-		Psyr_1083	0.78	+1.4
1,225,096	-		Psyr_1083	0.78	+3.5
1,225,096	-		Psyr_1083	0.78	+2.1
1,225,176	+		Psyr_1083	0.86	+0.8
1,225,176	+		Psyr_1083	0.86	+1.4
1,225,176	+		Psyr_1083	0.86	-2.7
1,225,177	-		Psyr_1083	0.86	+1.8
1,225,177	-		Psyr_1083	0.86	+0.1
1,225,177	-		Psyr_1083	0.86	+1.8
1,225,177	-		Psyr_1083	0.86	+3.2
1,225,177	-		Psyr_1083	0.86	-1.5
1,225,177	-		Psyr_1083	0.86	-1.5
1,225,177	-		Psyr_1083	0.86	+0.5
1,225,369	+				+2.1
1,225,370	-				+0.5
1,225,428	+				-0.6
1,225,428	+				+1.2
1,225,450	+				+2.1
1,225,450	+				-0.7
1,225,451	-				+1.6
1,225,456	+				-2.3
1,225,457	-				+1.7
1,225,457	-				+2.8
1,225,457	-				+1.3
1,225,480	-				+1.4
1,225,508	+				+0.7
1,225,532	+				-0.9
1,225,532	+				+1.7
1,225,532	+				-0.2
1,225,533	-				-2.3
1,225,533	-				+0.2
1,225,548	+				-1.3
1,225,548	+				+0.3
1,225,548	+				-1.3
1,225,548	+				+1.2
1,225,548	+				+0.7
1,225,548	+				+1.2
1,225,548	+				+0.9
1,225,548	+				+2.4
1,225,549	-				+0.6
1,225,549	-				+3.1
1,225,549	-				+1.4
1,225,549	-				-0.9
1,225,549	-				-0.4
1,225,549	-				+0.6
1,225,549	-				+2.6
1,225,549	-				+0.4
1,225,549	-				+1.6
1,225,549	-				-1.8
1,225,563	+				+0.3
1,225,563	+				-2.3
1,225,563	+				+0.1
1,225,563	+				+1.3
1,225,563	+				+0.2
1,225,564	-				+1.2
1,225,564	-				+1.5
1,225,564	-				+1.9
1,225,564	-				-1.7
1,225,564	-				-1.7
1,225,564	-				+2.0
1,225,589	+				+1.1
1,225,590	-				-0.1
1,225,593	+				+2.2
1,225,594	-				+0.7
1,225,594	-				+1.9
1,225,594	-				+0.1
1,225,594	-				-0.7
1,225,594	-				-0.0
1,225,594	-				+1.3
1,225,594	-				-0.2
1,225,594	-				+2.7
1,225,607	+				+1.3
1,225,608	-				+1.5
1,225,714	+				+2.1
1,225,714	+				-0.3
1,225,715	-				+1.1
1,225,715	-				-2.9
1,225,715	-				+1.3
1,225,718	-				+0.6
1,225,718	-				+0.1
1,225,985	+				+1.7
1,225,985	+				-0.0
1,225,985	+				-0.9
1,225,985	+				-0.3
1,225,985	+				+0.8
1,225,985	+				+1.5
1,225,985	+				+1.1
1,225,985	+				-0.2
1,225,985	+				+0.1
1,225,985	+				+0.2
1,225,985	+				+0.1
1,225,985	+				+1.3
1,225,985	+				+0.3
1,225,985	+				+0.8
1,225,986	-				+0.1
1,225,986	-				+0.7
1,225,986	-				-1.2
1,225,986	-				+0.2
1,225,986	-				-0.9
1,225,986	-				-2.3
1,225,986	-				+0.1
1,226,184	+				+1.7
1,226,185	-				-0.5
1,226,185	-				+0.1
1,226,242	+				+0.4
1,226,282	+				-0.3