Experiment: Chromium(III) Chloride Hexahydrate 0.000390625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4635 and Pf6N2E2_4636 are separated by 266 nucleotides Pf6N2E2_4636 and Pf6N2E2_4637 are separated by 106 nucleotides Pf6N2E2_4637 and Pf6N2E2_4638 are separated by 11 nucleotides
Pf6N2E2_4635 - ATP-dependent RNA helicase RhlE, at 5,364,728 to 5,366,596
_4635
Pf6N2E2_4636 - periplasmic binding protein, putative, at 5,366,863 to 5,367,588
_4636
Pf6N2E2_4637 - hypothetical protein, at 5,367,695 to 5,367,838
_4637
Pf6N2E2_4638 - 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20), at 5,367,850 to 5,368,695
_4638
Position (kb)
5366
5367
5368 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5366.201 kb on + strand, within Pf6N2E2_4635 at 5366.201 kb on + strand, within Pf6N2E2_4635 at 5366.202 kb on - strand, within Pf6N2E2_4635 at 5366.202 kb on - strand, within Pf6N2E2_4635 at 5366.202 kb on - strand, within Pf6N2E2_4635 at 5366.202 kb on - strand, within Pf6N2E2_4635 at 5366.292 kb on + strand, within Pf6N2E2_4635 at 5366.312 kb on + strand, within Pf6N2E2_4635 at 5366.313 kb on - strand, within Pf6N2E2_4635 at 5366.313 kb on - strand, within Pf6N2E2_4635 at 5366.447 kb on - strand at 5366.452 kb on + strand at 5366.453 kb on - strand at 5366.453 kb on - strand at 5366.453 kb on - strand at 5366.525 kb on - strand at 5366.536 kb on - strand at 5366.600 kb on + strand at 5366.600 kb on + strand at 5366.600 kb on + strand at 5366.600 kb on + strand at 5366.600 kb on + strand at 5366.601 kb on - strand at 5366.601 kb on - strand at 5366.611 kb on + strand at 5366.611 kb on + strand at 5366.612 kb on - strand at 5366.812 kb on + strand at 5366.812 kb on + strand at 5366.812 kb on + strand at 5366.812 kb on + strand at 5366.813 kb on - strand at 5366.813 kb on - strand at 5366.813 kb on - strand at 5366.813 kb on - strand at 5366.813 kb on - strand at 5366.814 kb on + strand at 5366.814 kb on + strand at 5366.814 kb on + strand at 5366.815 kb on - strand at 5366.815 kb on - strand at 5366.815 kb on - strand at 5366.815 kb on - strand at 5366.859 kb on + strand at 5366.859 kb on + strand at 5366.860 kb on - strand at 5366.936 kb on + strand, within Pf6N2E2_4636 at 5367.023 kb on + strand, within Pf6N2E2_4636 at 5367.023 kb on + strand, within Pf6N2E2_4636 at 5367.222 kb on - strand, within Pf6N2E2_4636 at 5367.303 kb on - strand, within Pf6N2E2_4636 at 5367.319 kb on + strand, within Pf6N2E2_4636 at 5367.319 kb on + strand, within Pf6N2E2_4636 at 5367.319 kb on + strand, within Pf6N2E2_4636 at 5367.320 kb on - strand, within Pf6N2E2_4636 at 5367.320 kb on - strand, within Pf6N2E2_4636 at 5367.320 kb on - strand, within Pf6N2E2_4636 at 5367.320 kb on - strand, within Pf6N2E2_4636 at 5367.497 kb on + strand, within Pf6N2E2_4636 at 5367.497 kb on + strand, within Pf6N2E2_4636 at 5367.498 kb on - strand, within Pf6N2E2_4636 at 5367.498 kb on - strand, within Pf6N2E2_4636 at 5367.530 kb on + strand at 5367.531 kb on - strand at 5367.531 kb on - strand at 5367.536 kb on + strand at 5367.537 kb on - strand at 5367.537 kb on - strand at 5367.537 kb on - strand at 5367.537 kb on - strand at 5367.670 kb on + strand at 5367.670 kb on + strand at 5367.670 kb on + strand at 5367.671 kb on - strand at 5367.671 kb on - strand at 5367.671 kb on - strand at 5367.671 kb on - strand at 5367.674 kb on + strand at 5367.674 kb on + strand at 5367.674 kb on + strand at 5367.674 kb on + strand at 5367.675 kb on - strand at 5367.675 kb on - strand at 5367.675 kb on - strand at 5367.675 kb on - strand at 5367.696 kb on + strand at 5367.696 kb on + strand at 5367.697 kb on - strand at 5367.707 kb on + strand at 5367.708 kb on - strand at 5367.708 kb on - strand at 5367.833 kb on + strand at 5367.833 kb on + strand at 5367.834 kb on - strand at 5367.842 kb on - strand at 5367.910 kb on - strand at 5367.911 kb on + strand at 5367.912 kb on - strand at 5367.912 kb on - strand at 5368.010 kb on + strand, within Pf6N2E2_4638 at 5368.085 kb on + strand, within Pf6N2E2_4638 at 5368.086 kb on - strand, within Pf6N2E2_4638 at 5368.086 kb on - strand, within Pf6N2E2_4638 at 5368.163 kb on + strand, within Pf6N2E2_4638 at 5368.163 kb on + strand, within Pf6N2E2_4638 at 5368.163 kb on + strand, within Pf6N2E2_4638 at 5368.164 kb on - strand, within Pf6N2E2_4638 at 5368.164 kb on - strand, within Pf6N2E2_4638 at 5368.571 kb on + strand, within Pf6N2E2_4638 at 5368.571 kb on + strand, within Pf6N2E2_4638 at 5368.571 kb on + strand, within Pf6N2E2_4638
Per-strain Table
Position Strand Gene LocusTag Fraction Chromium(III) Chloride Hexahydrate 0.000390625 M remove 5,366,201 + Pf6N2E2_4635 0.79 -2.0 5,366,201 + Pf6N2E2_4635 0.79 +0.2 5,366,202 - Pf6N2E2_4635 0.79 +0.4 5,366,202 - Pf6N2E2_4635 0.79 +0.8 5,366,202 - Pf6N2E2_4635 0.79 +0.4 5,366,202 - Pf6N2E2_4635 0.79 -0.4 5,366,292 + Pf6N2E2_4635 0.84 +0.9 5,366,312 + Pf6N2E2_4635 0.85 +0.3 5,366,313 - Pf6N2E2_4635 0.85 +0.0 5,366,313 - Pf6N2E2_4635 0.85 +2.3 5,366,447 - +0.4 5,366,452 + -0.4 5,366,453 - -0.6 5,366,453 - -0.4 5,366,453 - -1.5 5,366,525 - +1.3 5,366,536 - +0.3 5,366,600 + -0.3 5,366,600 + +1.5 5,366,600 + -1.8 5,366,600 + +0.5 5,366,600 + +0.3 5,366,601 - +0.5 5,366,601 - +0.6 5,366,611 + +0.2 5,366,611 + -0.5 5,366,612 - -0.5 5,366,812 + -0.5 5,366,812 + +0.7 5,366,812 + -0.5 5,366,812 + -1.2 5,366,813 - +0.4 5,366,813 - +0.3 5,366,813 - +2.0 5,366,813 - +0.9 5,366,813 - -0.8 5,366,814 + -0.1 5,366,814 + -0.1 5,366,814 + -1.3 5,366,815 - -0.1 5,366,815 - +0.8 5,366,815 - +0.2 5,366,815 - -0.6 5,366,859 + -0.4 5,366,859 + -0.1 5,366,860 - -0.2 5,366,936 + Pf6N2E2_4636 0.10 -0.8 5,367,023 + Pf6N2E2_4636 0.22 -0.9 5,367,023 + Pf6N2E2_4636 0.22 -0.4 5,367,222 - Pf6N2E2_4636 0.49 -1.5 5,367,303 - Pf6N2E2_4636 0.61 -0.5 5,367,319 + Pf6N2E2_4636 0.63 +0.4 5,367,319 + Pf6N2E2_4636 0.63 -0.3 5,367,319 + Pf6N2E2_4636 0.63 -0.5 5,367,320 - Pf6N2E2_4636 0.63 -1.1 5,367,320 - Pf6N2E2_4636 0.63 -0.6 5,367,320 - Pf6N2E2_4636 0.63 -1.7 5,367,320 - Pf6N2E2_4636 0.63 -1.4 5,367,497 + Pf6N2E2_4636 0.87 -0.4 5,367,497 + Pf6N2E2_4636 0.87 -1.4 5,367,498 - Pf6N2E2_4636 0.87 +1.0 5,367,498 - Pf6N2E2_4636 0.87 -2.7 5,367,530 + -3.2 5,367,531 - -1.3 5,367,531 - -0.9 5,367,536 + -0.9 5,367,537 - -0.9 5,367,537 - -0.3 5,367,537 - -0.5 5,367,537 - -2.0 5,367,670 + -1.0 5,367,670 + -0.6 5,367,670 + -0.7 5,367,671 - +1.4 5,367,671 - -0.5 5,367,671 - -0.9 5,367,671 - -0.8 5,367,674 + -1.0 5,367,674 + -0.5 5,367,674 + +0.5 5,367,674 + -1.1 5,367,675 - -0.3 5,367,675 - +1.4 5,367,675 - +0.7 5,367,675 - -1.7 5,367,696 + -0.9 5,367,696 + +0.1 5,367,697 - -0.6 5,367,707 + +0.7 5,367,708 - +0.7 5,367,708 - -0.2 5,367,833 + -1.6 5,367,833 + -0.6 5,367,834 - +0.9 5,367,842 - +0.2 5,367,910 - -0.1 5,367,911 + +1.2 5,367,912 - -0.2 5,367,912 - +0.2 5,368,010 + Pf6N2E2_4638 0.19 -1.2 5,368,085 + Pf6N2E2_4638 0.28 +0.1 5,368,086 - Pf6N2E2_4638 0.28 -0.0 5,368,086 - Pf6N2E2_4638 0.28 -1.1 5,368,163 + Pf6N2E2_4638 0.37 -1.6 5,368,163 + Pf6N2E2_4638 0.37 -0.6 5,368,163 + Pf6N2E2_4638 0.37 -1.0 5,368,164 - Pf6N2E2_4638 0.37 +0.4 5,368,164 - Pf6N2E2_4638 0.37 +0.4 5,368,571 + Pf6N2E2_4638 0.85 +1.3 5,368,571 + Pf6N2E2_4638 0.85 +0.7 5,368,571 + Pf6N2E2_4638 0.85 -1.3
Or see this region's nucleotide sequence