Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4632

Experiment: Chromium(III) Chloride Hexahydrate 0.000390625 M

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_4631 and Pf6N2E2_4632 are separated by 224 nucleotidesPf6N2E2_4632 and Pf6N2E2_4633 are separated by 590 nucleotides Pf6N2E2_4631 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62), at 5,359,322 to 5,360,728 _4631 Pf6N2E2_4632 - Amine oxidase [flavin-containing] (EC 1.4.3.4), at 5,360,953 to 5,362,716 _4632 Pf6N2E2_4633 - Cytochrome B561, at 5,363,307 to 5,363,858 _4633 Position (kb) 5360 5361 5362 5363Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 5359.986 kb on + strand, within Pf6N2E2_4631at 5360.031 kb on + strand, within Pf6N2E2_4631at 5360.031 kb on + strand, within Pf6N2E2_4631at 5360.031 kb on + strand, within Pf6N2E2_4631at 5360.032 kb on - strand, within Pf6N2E2_4631at 5360.175 kb on + strand, within Pf6N2E2_4631at 5360.176 kb on - strand, within Pf6N2E2_4631at 5360.223 kb on + strand, within Pf6N2E2_4631at 5360.223 kb on + strand, within Pf6N2E2_4631at 5360.224 kb on - strand, within Pf6N2E2_4631at 5360.224 kb on - strand, within Pf6N2E2_4631at 5360.224 kb on - strand, within Pf6N2E2_4631at 5360.224 kb on - strand, within Pf6N2E2_4631at 5360.283 kb on + strand, within Pf6N2E2_4631at 5360.283 kb on + strand, within Pf6N2E2_4631at 5360.284 kb on - strand, within Pf6N2E2_4631at 5360.341 kb on - strand, within Pf6N2E2_4631at 5360.394 kb on + strand, within Pf6N2E2_4631at 5360.583 kb on + strand, within Pf6N2E2_4631at 5360.717 kb on - strandat 5360.785 kb on + strandat 5360.785 kb on + strandat 5360.785 kb on + strandat 5360.785 kb on + strandat 5360.785 kb on + strandat 5360.786 kb on - strandat 5360.786 kb on - strandat 5360.879 kb on + strandat 5360.879 kb on + strandat 5360.925 kb on + strandat 5360.926 kb on - strandat 5360.929 kb on + strandat 5360.929 kb on + strandat 5360.929 kb on + strandat 5360.929 kb on + strandat 5360.930 kb on - strandat 5360.930 kb on - strandat 5360.993 kb on + strandat 5360.994 kb on - strandat 5360.994 kb on - strandat 5361.082 kb on + strandat 5361.082 kb on + strandat 5361.083 kb on - strandat 5361.208 kb on + strand, within Pf6N2E2_4632at 5361.208 kb on + strand, within Pf6N2E2_4632at 5361.208 kb on + strand, within Pf6N2E2_4632at 5361.208 kb on + strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.209 kb on - strand, within Pf6N2E2_4632at 5361.268 kb on + strand, within Pf6N2E2_4632at 5361.268 kb on + strand, within Pf6N2E2_4632at 5361.268 kb on + strand, within Pf6N2E2_4632at 5361.269 kb on - strand, within Pf6N2E2_4632at 5361.269 kb on - strand, within Pf6N2E2_4632at 5361.269 kb on - strand, within Pf6N2E2_4632at 5361.269 kb on - strand, within Pf6N2E2_4632at 5361.269 kb on - strand, within Pf6N2E2_4632at 5361.286 kb on + strand, within Pf6N2E2_4632at 5361.286 kb on + strand, within Pf6N2E2_4632at 5361.286 kb on + strand, within Pf6N2E2_4632at 5361.286 kb on + strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.287 kb on - strand, within Pf6N2E2_4632at 5361.568 kb on + strand, within Pf6N2E2_4632at 5361.736 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.748 kb on + strand, within Pf6N2E2_4632at 5361.749 kb on - strand, within Pf6N2E2_4632at 5361.749 kb on - strand, within Pf6N2E2_4632at 5361.845 kb on - strand, within Pf6N2E2_4632at 5361.845 kb on - strand, within Pf6N2E2_4632at 5361.845 kb on - strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.864 kb on + strand, within Pf6N2E2_4632at 5361.865 kb on - strand, within Pf6N2E2_4632at 5361.865 kb on - strand, within Pf6N2E2_4632at 5361.922 kb on + strand, within Pf6N2E2_4632at 5361.922 kb on + strand, within Pf6N2E2_4632at 5361.922 kb on + strand, within Pf6N2E2_4632at 5361.922 kb on + strand, within Pf6N2E2_4632at 5361.923 kb on - strand, within Pf6N2E2_4632at 5361.923 kb on - strand, within Pf6N2E2_4632at 5361.923 kb on - strand, within Pf6N2E2_4632at 5362.055 kb on + strand, within Pf6N2E2_4632at 5362.055 kb on + strand, within Pf6N2E2_4632at 5362.055 kb on + strand, within Pf6N2E2_4632at 5362.078 kb on + strand, within Pf6N2E2_4632at 5362.123 kb on + strand, within Pf6N2E2_4632at 5362.186 kb on + strand, within Pf6N2E2_4632at 5362.186 kb on + strand, within Pf6N2E2_4632at 5362.187 kb on - strand, within Pf6N2E2_4632at 5362.187 kb on - strand, within Pf6N2E2_4632at 5362.715 kb on - strandat 5362.750 kb on - strandat 5362.750 kb on - strandat 5362.750 kb on - strandat 5362.750 kb on - strandat 5362.750 kb on - strandat 5362.764 kb on - strandat 5362.931 kb on - strandat 5362.931 kb on - strandat 5362.962 kb on + strandat 5362.963 kb on - strandat 5362.963 kb on - strandat 5362.982 kb on + strandat 5362.983 kb on - strandat 5362.983 kb on - strandat 5362.983 kb on - strandat 5362.983 kb on - strandat 5362.984 kb on + strandat 5362.985 kb on - strandat 5362.985 kb on - strandat 5362.997 kb on + strandat 5362.998 kb on - strandat 5362.998 kb on - strandat 5363.017 kb on + strandat 5363.017 kb on + strandat 5363.017 kb on + strandat 5363.017 kb on + strandat 5363.017 kb on + strandat 5363.018 kb on - strandat 5363.018 kb on - strandat 5363.018 kb on - strandat 5363.021 kb on - strandat 5363.037 kb on + strandat 5363.038 kb on - strandat 5363.038 kb on - strandat 5363.038 kb on - strandat 5363.038 kb on - strandat 5363.038 kb on - strandat 5363.069 kb on + strandat 5363.069 kb on + strandat 5363.070 kb on - strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.072 kb on + strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.073 kb on - strandat 5363.139 kb on + strandat 5363.139 kb on + strandat 5363.140 kb on - strandat 5363.179 kb on + strandat 5363.180 kb on - strandat 5363.180 kb on - strandat 5363.180 kb on - strandat 5363.218 kb on + strandat 5363.218 kb on + strandat 5363.265 kb on + strandat 5363.265 kb on + strandat 5363.266 kb on - strandat 5363.266 kb on - strandat 5363.299 kb on + strandat 5363.299 kb on + strandat 5363.299 kb on + strandat 5363.300 kb on - strandat 5363.314 kb on + strandat 5363.314 kb on + strandat 5363.315 kb on - strandat 5363.315 kb on - strandat 5363.315 kb on - strandat 5363.349 kb on - strandat 5363.382 kb on + strand, within Pf6N2E2_4633at 5363.382 kb on + strand, within Pf6N2E2_4633at 5363.383 kb on - strand, within Pf6N2E2_4633at 5363.424 kb on + strand, within Pf6N2E2_4633at 5363.424 kb on + strand, within Pf6N2E2_4633at 5363.425 kb on - strand, within Pf6N2E2_4633at 5363.425 kb on - strand, within Pf6N2E2_4633at 5363.427 kb on + strand, within Pf6N2E2_4633at 5363.427 kb on + strand, within Pf6N2E2_4633at 5363.427 kb on + strand, within Pf6N2E2_4633at 5363.427 kb on + strand, within Pf6N2E2_4633at 5363.428 kb on - strand, within Pf6N2E2_4633at 5363.428 kb on - strand, within Pf6N2E2_4633at 5363.550 kb on + strand, within Pf6N2E2_4633at 5363.551 kb on - strand, within Pf6N2E2_4633at 5363.588 kb on + strand, within Pf6N2E2_4633at 5363.589 kb on - strand, within Pf6N2E2_4633at 5363.589 kb on - strand, within Pf6N2E2_4633at 5363.589 kb on - strand, within Pf6N2E2_4633at 5363.598 kb on + strand, within Pf6N2E2_4633at 5363.598 kb on + strand, within Pf6N2E2_4633at 5363.599 kb on - strand, within Pf6N2E2_4633

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Per-strain Table

Position Strand Gene LocusTag Fraction Chromium(III) Chloride Hexahydrate 0.000390625 M
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5,359,986 + Pf6N2E2_4631 0.47 -0.4
5,360,031 + Pf6N2E2_4631 0.50 -3.1
5,360,031 + Pf6N2E2_4631 0.50 +0.3
5,360,031 + Pf6N2E2_4631 0.50 -0.4
5,360,032 - Pf6N2E2_4631 0.50 +1.1
5,360,175 + Pf6N2E2_4631 0.61 -2.2
5,360,176 - Pf6N2E2_4631 0.61 -0.8
5,360,223 + Pf6N2E2_4631 0.64 -0.8
5,360,223 + Pf6N2E2_4631 0.64 -1.6
5,360,224 - Pf6N2E2_4631 0.64 +1.7
5,360,224 - Pf6N2E2_4631 0.64 -0.1
5,360,224 - Pf6N2E2_4631 0.64 +0.3
5,360,224 - Pf6N2E2_4631 0.64 +0.6
5,360,283 + Pf6N2E2_4631 0.68 -1.2
5,360,283 + Pf6N2E2_4631 0.68 -0.4
5,360,284 - Pf6N2E2_4631 0.68 -2.2
5,360,341 - Pf6N2E2_4631 0.72 -1.5
5,360,394 + Pf6N2E2_4631 0.76 -2.1
5,360,583 + Pf6N2E2_4631 0.90 +0.0
5,360,717 - -1.3
5,360,785 + +0.1
5,360,785 + +0.3
5,360,785 + -0.6
5,360,785 + -0.6
5,360,785 + -2.3
5,360,786 - -1.1
5,360,786 - +0.6
5,360,879 + +0.9
5,360,879 + -0.2
5,360,925 + +0.7
5,360,926 - -0.8
5,360,929 + -0.9
5,360,929 + -1.0
5,360,929 + +0.2
5,360,929 + -1.8
5,360,930 - -1.0
5,360,930 - -1.3
5,360,993 + -0.3
5,360,994 - -1.4
5,360,994 - -1.6
5,361,082 + -1.7
5,361,082 + -1.3
5,361,083 - -1.4
5,361,208 + Pf6N2E2_4632 0.14 -0.9
5,361,208 + Pf6N2E2_4632 0.14 -3.8
5,361,208 + Pf6N2E2_4632 0.14 -3.1
5,361,208 + Pf6N2E2_4632 0.14 -3.1
5,361,209 - Pf6N2E2_4632 0.15 -0.4
5,361,209 - Pf6N2E2_4632 0.15 -0.4
5,361,209 - Pf6N2E2_4632 0.15 -2.9
5,361,209 - Pf6N2E2_4632 0.15 -1.1
5,361,209 - Pf6N2E2_4632 0.15 -2.7
5,361,209 - Pf6N2E2_4632 0.15 -1.0
5,361,209 - Pf6N2E2_4632 0.15 -1.0
5,361,209 - Pf6N2E2_4632 0.15 -1.5
5,361,268 + Pf6N2E2_4632 0.18 -1.3
5,361,268 + Pf6N2E2_4632 0.18 -1.4
5,361,268 + Pf6N2E2_4632 0.18 -0.7
5,361,269 - Pf6N2E2_4632 0.18 -0.7
5,361,269 - Pf6N2E2_4632 0.18 -2.7
5,361,269 - Pf6N2E2_4632 0.18 -3.5
5,361,269 - Pf6N2E2_4632 0.18 -1.2
5,361,269 - Pf6N2E2_4632 0.18 -3.5
5,361,286 + Pf6N2E2_4632 0.19 -1.3
5,361,286 + Pf6N2E2_4632 0.19 -1.4
5,361,286 + Pf6N2E2_4632 0.19 -0.8
5,361,286 + Pf6N2E2_4632 0.19 -2.1
5,361,287 - Pf6N2E2_4632 0.19 -1.5
5,361,287 - Pf6N2E2_4632 0.19 -0.7
5,361,287 - Pf6N2E2_4632 0.19 -0.9
5,361,287 - Pf6N2E2_4632 0.19 -3.0
5,361,287 - Pf6N2E2_4632 0.19 -2.3
5,361,287 - Pf6N2E2_4632 0.19 -1.8
5,361,287 - Pf6N2E2_4632 0.19 -0.8
5,361,287 - Pf6N2E2_4632 0.19 -1.9
5,361,287 - Pf6N2E2_4632 0.19 -0.4
5,361,287 - Pf6N2E2_4632 0.19 -1.6
5,361,568 + Pf6N2E2_4632 0.35 -1.5
5,361,736 + Pf6N2E2_4632 0.44 -1.1
5,361,748 + Pf6N2E2_4632 0.45 -1.2
5,361,748 + Pf6N2E2_4632 0.45 -3.4
5,361,748 + Pf6N2E2_4632 0.45 -1.3
5,361,748 + Pf6N2E2_4632 0.45 -1.3
5,361,748 + Pf6N2E2_4632 0.45 -1.4
5,361,748 + Pf6N2E2_4632 0.45 -1.4
5,361,749 - Pf6N2E2_4632 0.45 -0.4
5,361,749 - Pf6N2E2_4632 0.45 -0.5
5,361,845 - Pf6N2E2_4632 0.51 -1.8
5,361,845 - Pf6N2E2_4632 0.51 -1.0
5,361,845 - Pf6N2E2_4632 0.51 -2.1
5,361,864 + Pf6N2E2_4632 0.52 -2.3
5,361,864 + Pf6N2E2_4632 0.52 -0.6
5,361,864 + Pf6N2E2_4632 0.52 -1.2
5,361,864 + Pf6N2E2_4632 0.52 -1.5
5,361,864 + Pf6N2E2_4632 0.52 -1.5
5,361,864 + Pf6N2E2_4632 0.52 -1.5
5,361,864 + Pf6N2E2_4632 0.52 -0.1
5,361,864 + Pf6N2E2_4632 0.52 -0.0
5,361,865 - Pf6N2E2_4632 0.52 -0.7
5,361,865 - Pf6N2E2_4632 0.52 -1.8
5,361,922 + Pf6N2E2_4632 0.55 -1.9
5,361,922 + Pf6N2E2_4632 0.55 -3.5
5,361,922 + Pf6N2E2_4632 0.55 -1.2
5,361,922 + Pf6N2E2_4632 0.55 -0.0
5,361,923 - Pf6N2E2_4632 0.55 -3.3
5,361,923 - Pf6N2E2_4632 0.55 -2.5
5,361,923 - Pf6N2E2_4632 0.55 -2.4
5,362,055 + Pf6N2E2_4632 0.62 -1.4
5,362,055 + Pf6N2E2_4632 0.62 -1.7
5,362,055 + Pf6N2E2_4632 0.62 -2.5
5,362,078 + Pf6N2E2_4632 0.64 -2.2
5,362,123 + Pf6N2E2_4632 0.66 -1.9
5,362,186 + Pf6N2E2_4632 0.70 -1.9
5,362,186 + Pf6N2E2_4632 0.70 -2.3
5,362,187 - Pf6N2E2_4632 0.70 -2.3
5,362,187 - Pf6N2E2_4632 0.70 -1.6
5,362,715 - -2.0
5,362,750 - +0.2
5,362,750 - -0.2
5,362,750 - -0.2
5,362,750 - -0.2
5,362,750 - -0.5
5,362,764 - +0.8
5,362,931 - +0.3
5,362,931 - -0.1
5,362,962 + -0.0
5,362,963 - -1.3
5,362,963 - +0.6
5,362,982 + +0.8
5,362,983 - +0.3
5,362,983 - +1.1
5,362,983 - -0.4
5,362,983 - -0.1
5,362,984 + +1.5
5,362,985 - +0.4
5,362,985 - +0.6
5,362,997 + +0.1
5,362,998 - -0.1
5,362,998 - +0.2
5,363,017 + +0.8
5,363,017 + +0.6
5,363,017 + -0.3
5,363,017 + -0.8
5,363,017 + -0.3
5,363,018 - +0.3
5,363,018 - +0.8
5,363,018 - +1.1
5,363,021 - -0.5
5,363,037 + -0.4
5,363,038 - -0.5
5,363,038 - -0.3
5,363,038 - +0.5
5,363,038 - -0.3
5,363,038 - -0.6
5,363,069 + -0.4
5,363,069 + -0.0
5,363,070 - +0.2
5,363,072 + +0.3
5,363,072 + +0.2
5,363,072 + +0.7
5,363,072 + +1.3
5,363,072 + +0.8
5,363,072 + -0.7
5,363,072 + -0.7
5,363,072 + +0.4
5,363,072 + +0.1
5,363,073 - +0.5
5,363,073 - -0.7
5,363,073 - +0.5
5,363,073 - -1.5
5,363,073 - -0.5
5,363,073 - -0.2
5,363,073 - -0.4
5,363,073 - +0.6
5,363,073 - -1.9
5,363,073 - +0.1
5,363,073 - +0.9
5,363,073 - -0.1
5,363,073 - +0.8
5,363,073 - -0.8
5,363,073 - -3.3
5,363,073 - +1.2
5,363,139 + -0.5
5,363,139 + -0.7
5,363,140 - -0.9
5,363,179 + -0.3
5,363,180 - -0.6
5,363,180 - +0.3
5,363,180 - -0.1
5,363,218 + +0.9
5,363,218 + +0.7
5,363,265 + -1.0
5,363,265 + +0.4
5,363,266 - -0.4
5,363,266 - +0.7
5,363,299 + +0.3
5,363,299 + -0.4
5,363,299 + +0.9
5,363,300 - +0.3
5,363,314 + +1.1
5,363,314 + +1.0
5,363,315 - -0.4
5,363,315 - -0.8
5,363,315 - +0.8
5,363,349 - -0.3
5,363,382 + Pf6N2E2_4633 0.14 -0.3
5,363,382 + Pf6N2E2_4633 0.14 -1.5
5,363,383 - Pf6N2E2_4633 0.14 +0.3
5,363,424 + Pf6N2E2_4633 0.21 -0.2
5,363,424 + Pf6N2E2_4633 0.21 -2.5
5,363,425 - Pf6N2E2_4633 0.21 -0.1
5,363,425 - Pf6N2E2_4633 0.21 +0.4
5,363,427 + Pf6N2E2_4633 0.22 +0.3
5,363,427 + Pf6N2E2_4633 0.22 +0.2
5,363,427 + Pf6N2E2_4633 0.22 +0.5
5,363,427 + Pf6N2E2_4633 0.22 -0.8
5,363,428 - Pf6N2E2_4633 0.22 +0.4
5,363,428 - Pf6N2E2_4633 0.22 -0.8
5,363,550 + Pf6N2E2_4633 0.44 +0.2
5,363,551 - Pf6N2E2_4633 0.44 -1.5
5,363,588 + Pf6N2E2_4633 0.51 +1.1
5,363,589 - Pf6N2E2_4633 0.51 +0.3
5,363,589 - Pf6N2E2_4633 0.51 +0.3
5,363,589 - Pf6N2E2_4633 0.51 -1.6
5,363,598 + Pf6N2E2_4633 0.53 +0.4
5,363,598 + Pf6N2E2_4633 0.53 +1.0
5,363,599 - Pf6N2E2_4633 0.53 -2.5

Or see this region's nucleotide sequence