Experiment: Chromium(III) Chloride Hexahydrate 0.000390625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3278 and Pf6N2E2_3279 are separated by 96 nucleotides Pf6N2E2_3279 and Pf6N2E2_3280 are separated by 148 nucleotides
Pf6N2E2_3278 - TldE protein, part of TldE/TldD proteolytic complex, at 3,781,105 to 3,782,463
_3278
Pf6N2E2_3279 - FIG138315: Putative alpha helix protein, at 3,782,560 to 3,783,084
_3279
Pf6N2E2_3280 - TldD protein, part of TldE/TldD proteolytic complex, at 3,783,233 to 3,784,675
_3280
Position (kb)
3782
3783
3784 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3781.839 kb on - strand, within Pf6N2E2_3278 at 3781.913 kb on + strand, within Pf6N2E2_3278 at 3781.944 kb on - strand, within Pf6N2E2_3278 at 3781.944 kb on - strand, within Pf6N2E2_3278 at 3781.966 kb on - strand, within Pf6N2E2_3278 at 3782.163 kb on + strand, within Pf6N2E2_3278 at 3782.164 kb on - strand, within Pf6N2E2_3278 at 3782.246 kb on + strand, within Pf6N2E2_3278 at 3782.246 kb on + strand, within Pf6N2E2_3278 at 3782.246 kb on + strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.247 kb on - strand, within Pf6N2E2_3278 at 3782.339 kb on - strand at 3782.339 kb on - strand at 3782.587 kb on + strand at 3782.854 kb on + strand, within Pf6N2E2_3279 at 3782.855 kb on - strand, within Pf6N2E2_3279 at 3782.855 kb on - strand, within Pf6N2E2_3279 at 3782.855 kb on - strand, within Pf6N2E2_3279 at 3782.966 kb on + strand, within Pf6N2E2_3279 at 3782.966 kb on + strand, within Pf6N2E2_3279 at 3782.966 kb on + strand, within Pf6N2E2_3279 at 3782.967 kb on - strand, within Pf6N2E2_3279 at 3782.967 kb on - strand, within Pf6N2E2_3279 at 3782.967 kb on - strand, within Pf6N2E2_3279 at 3783.043 kb on + strand at 3783.043 kb on + strand at 3783.043 kb on + strand at 3783.111 kb on - strand at 3783.111 kb on - strand at 3783.180 kb on - strand at 3783.186 kb on + strand at 3783.187 kb on - strand at 3783.450 kb on + strand, within Pf6N2E2_3280 at 3783.451 kb on - strand, within Pf6N2E2_3280 at 3783.451 kb on - strand, within Pf6N2E2_3280 at 3783.522 kb on + strand, within Pf6N2E2_3280 at 3783.522 kb on + strand, within Pf6N2E2_3280 at 3783.522 kb on + strand, within Pf6N2E2_3280 at 3783.522 kb on + strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.523 kb on - strand, within Pf6N2E2_3280 at 3783.527 kb on - strand, within Pf6N2E2_3280 at 3783.527 kb on - strand, within Pf6N2E2_3280 at 3783.527 kb on - strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.582 kb on + strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.583 kb on - strand, within Pf6N2E2_3280 at 3783.618 kb on + strand, within Pf6N2E2_3280 at 3783.687 kb on + strand, within Pf6N2E2_3280 at 3783.687 kb on + strand, within Pf6N2E2_3280 at 3783.840 kb on + strand, within Pf6N2E2_3280 at 3783.841 kb on - strand, within Pf6N2E2_3280
Per-strain Table
Position Strand Gene LocusTag Fraction Chromium(III) Chloride Hexahydrate 0.000390625 M remove 3,781,839 - Pf6N2E2_3278 0.54 +0.1 3,781,913 + Pf6N2E2_3278 0.59 +0.6 3,781,944 - Pf6N2E2_3278 0.62 +1.0 3,781,944 - Pf6N2E2_3278 0.62 +0.1 3,781,966 - Pf6N2E2_3278 0.63 -0.5 3,782,163 + Pf6N2E2_3278 0.78 -0.1 3,782,164 - Pf6N2E2_3278 0.78 -0.3 3,782,246 + Pf6N2E2_3278 0.84 -0.1 3,782,246 + Pf6N2E2_3278 0.84 +0.3 3,782,246 + Pf6N2E2_3278 0.84 -0.3 3,782,247 - Pf6N2E2_3278 0.84 -0.5 3,782,247 - Pf6N2E2_3278 0.84 +0.6 3,782,247 - Pf6N2E2_3278 0.84 -1.1 3,782,247 - Pf6N2E2_3278 0.84 -0.6 3,782,247 - Pf6N2E2_3278 0.84 +1.2 3,782,247 - Pf6N2E2_3278 0.84 +1.2 3,782,339 - +0.6 3,782,339 - +0.8 3,782,587 + -0.7 3,782,854 + Pf6N2E2_3279 0.56 +0.1 3,782,855 - Pf6N2E2_3279 0.56 -0.2 3,782,855 - Pf6N2E2_3279 0.56 -1.0 3,782,855 - Pf6N2E2_3279 0.56 -0.9 3,782,966 + Pf6N2E2_3279 0.77 +1.1 3,782,966 + Pf6N2E2_3279 0.77 -1.1 3,782,966 + Pf6N2E2_3279 0.77 -1.4 3,782,967 - Pf6N2E2_3279 0.78 -1.7 3,782,967 - Pf6N2E2_3279 0.78 -0.5 3,782,967 - Pf6N2E2_3279 0.78 -1.4 3,783,043 + -1.6 3,783,043 + -0.9 3,783,043 + -0.4 3,783,111 - +0.0 3,783,111 - +0.2 3,783,180 - +0.3 3,783,186 + +0.8 3,783,187 - +1.3 3,783,450 + Pf6N2E2_3280 0.15 -2.4 3,783,451 - Pf6N2E2_3280 0.15 +0.4 3,783,451 - Pf6N2E2_3280 0.15 -0.4 3,783,522 + Pf6N2E2_3280 0.20 -1.2 3,783,522 + Pf6N2E2_3280 0.20 -1.7 3,783,522 + Pf6N2E2_3280 0.20 +1.6 3,783,522 + Pf6N2E2_3280 0.20 -0.3 3,783,523 - Pf6N2E2_3280 0.20 +0.7 3,783,523 - Pf6N2E2_3280 0.20 -0.4 3,783,523 - Pf6N2E2_3280 0.20 +0.7 3,783,523 - Pf6N2E2_3280 0.20 -0.2 3,783,523 - Pf6N2E2_3280 0.20 +0.2 3,783,523 - Pf6N2E2_3280 0.20 +0.2 3,783,523 - Pf6N2E2_3280 0.20 +0.6 3,783,523 - Pf6N2E2_3280 0.20 -0.1 3,783,523 - Pf6N2E2_3280 0.20 -0.1 3,783,527 - Pf6N2E2_3280 0.20 -1.9 3,783,527 - Pf6N2E2_3280 0.20 -0.1 3,783,527 - Pf6N2E2_3280 0.20 -1.3 3,783,582 + Pf6N2E2_3280 0.24 +0.8 3,783,582 + Pf6N2E2_3280 0.24 -0.2 3,783,582 + Pf6N2E2_3280 0.24 +0.8 3,783,582 + Pf6N2E2_3280 0.24 +0.2 3,783,582 + Pf6N2E2_3280 0.24 -0.1 3,783,582 + Pf6N2E2_3280 0.24 +0.6 3,783,582 + Pf6N2E2_3280 0.24 -0.3 3,783,582 + Pf6N2E2_3280 0.24 +1.5 3,783,582 + Pf6N2E2_3280 0.24 -0.5 3,783,582 + Pf6N2E2_3280 0.24 +0.4 3,783,582 + Pf6N2E2_3280 0.24 +0.4 3,783,582 + Pf6N2E2_3280 0.24 +0.2 3,783,583 - Pf6N2E2_3280 0.24 +2.1 3,783,583 - Pf6N2E2_3280 0.24 +0.6 3,783,583 - Pf6N2E2_3280 0.24 -0.8 3,783,583 - Pf6N2E2_3280 0.24 +0.5 3,783,583 - Pf6N2E2_3280 0.24 -0.1 3,783,583 - Pf6N2E2_3280 0.24 -2.4 3,783,583 - Pf6N2E2_3280 0.24 -0.1 3,783,583 - Pf6N2E2_3280 0.24 +0.2 3,783,583 - Pf6N2E2_3280 0.24 -1.8 3,783,583 - Pf6N2E2_3280 0.24 -0.0 3,783,583 - Pf6N2E2_3280 0.24 -0.1 3,783,618 + Pf6N2E2_3280 0.27 +0.4 3,783,687 + Pf6N2E2_3280 0.31 -0.5 3,783,687 + Pf6N2E2_3280 0.31 -0.3 3,783,840 + Pf6N2E2_3280 0.42 +0.3 3,783,841 - Pf6N2E2_3280 0.42 +0.4
Or see this region's nucleotide sequence