Experiment: Chromium(III) Chloride Hexahydrate 0.000390625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1681 and Pf6N2E2_1682 are separated by 84 nucleotides Pf6N2E2_1682 and Pf6N2E2_1683 are separated by 0 nucleotides
Pf6N2E2_1681 - Multidrug resistance protein B, at 1,988,915 to 1,990,141
_1681
Pf6N2E2_1682 - RNA polymerase sigma-70 factor, ECF subfamily, at 1,990,226 to 1,990,741
_1682
Pf6N2E2_1683 - Fe2+-dicitrate sensor, membrane component, at 1,990,742 to 1,991,719
_1683
Position (kb)
1990
1991 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1989.279 kb on - strand, within Pf6N2E2_1681 at 1989.390 kb on + strand, within Pf6N2E2_1681 at 1989.391 kb on - strand, within Pf6N2E2_1681 at 1989.413 kb on + strand, within Pf6N2E2_1681 at 1989.413 kb on + strand, within Pf6N2E2_1681 at 1989.414 kb on - strand, within Pf6N2E2_1681 at 1989.414 kb on - strand, within Pf6N2E2_1681 at 1989.559 kb on + strand, within Pf6N2E2_1681 at 1989.559 kb on + strand, within Pf6N2E2_1681 at 1989.559 kb on + strand, within Pf6N2E2_1681 at 1989.559 kb on + strand, within Pf6N2E2_1681 at 1989.559 kb on + strand, within Pf6N2E2_1681 at 1989.560 kb on - strand, within Pf6N2E2_1681 at 1989.650 kb on + strand, within Pf6N2E2_1681 at 1989.650 kb on + strand, within Pf6N2E2_1681 at 1989.650 kb on + strand, within Pf6N2E2_1681 at 1989.650 kb on + strand, within Pf6N2E2_1681 at 1989.651 kb on - strand, within Pf6N2E2_1681 at 1989.651 kb on - strand, within Pf6N2E2_1681 at 1989.677 kb on - strand, within Pf6N2E2_1681 at 1989.794 kb on + strand, within Pf6N2E2_1681 at 1989.794 kb on + strand, within Pf6N2E2_1681 at 1989.795 kb on - strand, within Pf6N2E2_1681 at 1989.855 kb on + strand, within Pf6N2E2_1681 at 1989.856 kb on - strand, within Pf6N2E2_1681 at 1989.856 kb on - strand, within Pf6N2E2_1681 at 1990.049 kb on + strand at 1990.050 kb on - strand at 1990.050 kb on - strand at 1990.050 kb on - strand at 1990.055 kb on + strand at 1990.055 kb on + strand at 1990.055 kb on + strand at 1990.056 kb on - strand at 1990.056 kb on - strand at 1990.076 kb on + strand at 1990.077 kb on - strand at 1990.115 kb on - strand at 1990.283 kb on + strand, within Pf6N2E2_1682 at 1990.421 kb on + strand, within Pf6N2E2_1682 at 1990.422 kb on - strand, within Pf6N2E2_1682 at 1990.422 kb on - strand, within Pf6N2E2_1682 at 1990.646 kb on + strand, within Pf6N2E2_1682 at 1990.697 kb on + strand at 1990.698 kb on - strand at 1991.170 kb on - strand, within Pf6N2E2_1683 at 1991.349 kb on + strand, within Pf6N2E2_1683 at 1991.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chromium(III) Chloride Hexahydrate 0.000390625 M remove 1,989,279 - Pf6N2E2_1681 0.30 -0.0 1,989,390 + Pf6N2E2_1681 0.39 -0.1 1,989,391 - Pf6N2E2_1681 0.39 +0.7 1,989,413 + Pf6N2E2_1681 0.41 +0.1 1,989,413 + Pf6N2E2_1681 0.41 +0.3 1,989,414 - Pf6N2E2_1681 0.41 -1.1 1,989,414 - Pf6N2E2_1681 0.41 +0.0 1,989,559 + Pf6N2E2_1681 0.52 -0.2 1,989,559 + Pf6N2E2_1681 0.52 -1.1 1,989,559 + Pf6N2E2_1681 0.52 -0.1 1,989,559 + Pf6N2E2_1681 0.52 +0.8 1,989,559 + Pf6N2E2_1681 0.52 +1.1 1,989,560 - Pf6N2E2_1681 0.53 +0.9 1,989,650 + Pf6N2E2_1681 0.60 -0.5 1,989,650 + Pf6N2E2_1681 0.60 -2.1 1,989,650 + Pf6N2E2_1681 0.60 -1.0 1,989,650 + Pf6N2E2_1681 0.60 +0.3 1,989,651 - Pf6N2E2_1681 0.60 -1.0 1,989,651 - Pf6N2E2_1681 0.60 -1.2 1,989,677 - Pf6N2E2_1681 0.62 +0.9 1,989,794 + Pf6N2E2_1681 0.72 +0.2 1,989,794 + Pf6N2E2_1681 0.72 -1.3 1,989,795 - Pf6N2E2_1681 0.72 -1.3 1,989,855 + Pf6N2E2_1681 0.77 +0.4 1,989,856 - Pf6N2E2_1681 0.77 -0.7 1,989,856 - Pf6N2E2_1681 0.77 -0.4 1,990,049 + +0.2 1,990,050 - +0.4 1,990,050 - +1.1 1,990,050 - +0.5 1,990,055 + -0.2 1,990,055 + -1.2 1,990,055 + -0.0 1,990,056 - -0.1 1,990,056 - +1.3 1,990,076 + -0.4 1,990,077 - +0.6 1,990,115 - +2.7 1,990,283 + Pf6N2E2_1682 0.11 -0.1 1,990,421 + Pf6N2E2_1682 0.38 -0.5 1,990,422 - Pf6N2E2_1682 0.38 +0.2 1,990,422 - Pf6N2E2_1682 0.38 -1.5 1,990,646 + Pf6N2E2_1682 0.81 -1.2 1,990,697 + +0.7 1,990,698 - +1.2 1,991,170 - Pf6N2E2_1683 0.44 +0.8 1,991,349 + Pf6N2E2_1683 0.62 -0.6 1,991,733 - -0.6
Or see this region's nucleotide sequence