Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00021

Experiment: PYE 0.5x 4C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C
19,902	+		CCNA_00019	0.14	-1.1
19,904	+		CCNA_00019	0.14	-0.9
19,910	-		CCNA_00019	0.15	-2.4
19,937	+		CCNA_00019	0.19	-3.0
19,945	-		CCNA_00019	0.21	+2.0
20,000	+		CCNA_00019	0.29	-1.9
20,046	+		CCNA_00019	0.36	-2.0
20,170	-		CCNA_00019	0.56	+0.4
20,200	-		CCNA_00019	0.61	-1.0
20,239	+		CCNA_00019	0.67	-0.1
20,247	-		CCNA_00019	0.68	-0.6
20,247	-		CCNA_00019	0.68	-1.8
20,336	-		CCNA_00019	0.82	-1.4
20,336	-		CCNA_00019	0.82	+1.1
20,340	-		CCNA_00019	0.83	-1.0
20,355	+		CCNA_00019	0.85	-2.2
20,382	-		CCNA_00019	0.90	-0.0
20,434	+				-1.3
20,450	-				-0.5
20,574	-		CCNA_00020	0.58	-1.4
20,590	-		CCNA_00020	0.65	-1.3
20,678	-		CCNA_03911	0.11	+2.3
20,694	+		CCNA_03911	0.25	-2.3
20,697	-		CCNA_03911	0.28	-1.3
20,697	-		CCNA_03911	0.28	-2.1
20,738	-		CCNA_03911	0.64	-1.5
20,740	+		CCNA_03911	0.66	-0.5
20,749	+		CCNA_03911	0.74	-1.0
20,749	+		CCNA_03911	0.74	-2.5
20,754	+		CCNA_03911	0.78	-1.7
20,757	-		CCNA_03911	0.81	-0.7
20,863	-				-0.1
20,875	-				-1.6
20,880	+				+0.9
20,989	-				+2.0
21,008	-				-0.9
21,043	-				+1.2
21,069	-		CCNA_00021	0.10	+0.2
21,069	-		CCNA_00021	0.10	-0.8
21,091	+		CCNA_00021	0.11	+0.3
21,091	+		CCNA_00021	0.11	-1.1
21,091	+		CCNA_00021	0.11	-1.1
21,091	+		CCNA_00021	0.11	+0.6
21,091	+		CCNA_00021	0.11	-1.6
21,091	+		CCNA_00021	0.11	+1.6
21,091	+		CCNA_00021	0.11	-0.3
21,099	-		CCNA_00021	0.12	+0.3
21,108	+		CCNA_00021	0.12	-1.6
21,108	+		CCNA_00021	0.12	-1.5
21,156	-		CCNA_00021	0.14	-3.5
21,201	+		CCNA_00021	0.16	-2.1
21,201	+		CCNA_00021	0.16	+0.1
21,202	-		CCNA_00021	0.17	-0.8
21,208	+		CCNA_00021	0.17	-2.2
21,209	-		CCNA_00021	0.17	-0.7
21,209	-		CCNA_00021	0.17	-1.5
21,209	-		CCNA_00021	0.17	-0.6
21,209	-		CCNA_00021	0.17	-2.7
21,216	-		CCNA_00021	0.17	-3.4
21,280	+		CCNA_00021	0.20	-1.1
21,286	+		CCNA_00021	0.20	-2.4
21,291	+		CCNA_00021	0.21	-0.5
21,299	-		CCNA_00021	0.21	-0.3
21,299	-		CCNA_00021	0.21	-1.4
21,299	-		CCNA_00021	0.21	-3.9
21,299	-		CCNA_00021	0.21	+2.0
21,299	-		CCNA_00021	0.21	+0.1
21,306	+		CCNA_00021	0.21	+0.9
21,306	+		CCNA_00021	0.21	-0.7
21,316	-		CCNA_00021	0.22	-1.1
21,316	-		CCNA_00021	0.22	-1.9
21,369	+		CCNA_00021	0.24	-1.3
21,410	+		CCNA_00021	0.26	+0.3
21,466	-		CCNA_00021	0.29	+0.4
21,497	-		CCNA_00021	0.30	-0.1
21,514	+		CCNA_00021	0.31	-0.5
21,565	-		CCNA_00021	0.33	-0.6
21,565	-		CCNA_00021	0.33	-1.1
21,565	-		CCNA_00021	0.33	+0.1
21,565	-		CCNA_00021	0.33	-2.2
21,598	+		CCNA_00021	0.35	-0.4
21,598	-		CCNA_00021	0.35	+0.2
21,642	+		CCNA_00021	0.37	-2.9
21,650	-		CCNA_00021	0.37	+0.9
21,650	-		CCNA_00021	0.37	-0.8
21,694	-		CCNA_00021	0.39	+0.0
21,705	-		CCNA_00021	0.39	-1.4
21,717	+		CCNA_00021	0.40	+0.9
21,717	+		CCNA_00021	0.40	-0.5
21,717	+		CCNA_00021	0.40	-1.2
21,798	-		CCNA_00021	0.44	-1.1
21,852	-		CCNA_00021	0.46	-1.1
21,852	-		CCNA_00021	0.46	+0.3
21,863	+		CCNA_00021	0.47	-0.2
21,870	+		CCNA_00021	0.47	+1.2
21,870	+		CCNA_00021	0.47	+1.2
21,870	+		CCNA_00021	0.47	+0.3
21,871	-		CCNA_00021	0.47	-0.1
21,878	-		CCNA_00021	0.47	-1.8
21,890	+		CCNA_00021	0.48	-1.6
21,897	-		CCNA_00021	0.48	-0.0
21,898	-		CCNA_00021	0.48	-2.2
21,930	-		CCNA_00021	0.50	-0.0
22,023	+		CCNA_00021	0.54	-1.1
22,023	+		CCNA_00021	0.54	-1.6
22,060	+		CCNA_00021	0.56	-0.6
22,060	+		CCNA_00021	0.56	-0.7
22,060	+		CCNA_00021	0.56	-0.0
22,068	-		CCNA_00021	0.56	-1.5
22,068	-		CCNA_00021	0.56	-0.0
22,068	-		CCNA_00021	0.56	-1.4
22,068	-		CCNA_00021	0.56	-1.9
22,068	-		CCNA_00021	0.56	+1.1
22,068	-		CCNA_00021	0.56	-1.2
22,068	-		CCNA_00021	0.56	-1.1
22,068	-		CCNA_00021	0.56	-0.9
22,096	-		CCNA_00021	0.57	+1.5
22,105	-		CCNA_00021	0.58	-0.7
22,116	+		CCNA_00021	0.58	-1.7
22,123	-		CCNA_00021	0.59	-0.8
22,172	+		CCNA_00021	0.61	-0.1
22,198	+		CCNA_00021	0.62	+0.3
22,200	+		CCNA_00021	0.62	-3.0
22,208	+		CCNA_00021	0.62	+1.3
22,216	-		CCNA_00021	0.63	-0.1
22,249	+		CCNA_00021	0.64	-1.2
22,251	+		CCNA_00021	0.64	-2.6
22,257	-		CCNA_00021	0.65	-0.1
22,285	+		CCNA_00021	0.66	-1.7
22,293	+		CCNA_00021	0.66	-2.9
22,300	+		CCNA_00021	0.67	+2.0
22,300	-		CCNA_00021	0.67	+0.2
22,335	+		CCNA_00021	0.68	+0.9
22,389	+		CCNA_00021	0.71	-3.6
22,397	-		CCNA_00021	0.71	+0.8
22,412	-		CCNA_00021	0.72	+0.8
22,435	+		CCNA_00021	0.73	-1.8
22,438	-		CCNA_00021	0.73	-1.4
22,442	+		CCNA_00021	0.73	-2.5
22,451	-		CCNA_00021	0.73	+0.7
22,451	-		CCNA_00021	0.73	-0.2
22,459	+		CCNA_00021	0.74	-2.1
22,469	+		CCNA_00021	0.74	+0.0
22,469	+		CCNA_00021	0.74	-3.0
22,481	+		CCNA_00021	0.75	+0.1
22,494	+		CCNA_00021	0.75	-1.1
22,502	-		CCNA_00021	0.76	-0.1
22,504	-		CCNA_00021	0.76	+0.2
22,533	+		CCNA_00021	0.77	-1.0
22,533	-		CCNA_00021	0.77	+1.9
22,533	-		CCNA_00021	0.77	-0.4
22,550	+		CCNA_00021	0.78	-1.0
22,552	+		CCNA_00021	0.78	-0.9
22,558	-		CCNA_00021	0.78	-1.5
22,558	-		CCNA_00021	0.78	+0.2
22,632	+		CCNA_00021	0.82	+0.3
22,632	+		CCNA_00021	0.82	+1.1
22,679	+		CCNA_00021	0.84	-0.5
22,679	+		CCNA_00021	0.84	-1.5
22,706	+		CCNA_00021	0.85	-0.1
22,707	+		CCNA_00021	0.85	+1.6
22,707	+		CCNA_00021	0.85	-2.4
22,707	+		CCNA_00021	0.85	-1.4
22,707	+		CCNA_00021	0.85	-0.6
22,713	+		CCNA_00021	0.85	-0.1
22,715	-		CCNA_00021	0.85	+2.3
22,715	-		CCNA_00021	0.85	+3.2
22,719	+		CCNA_00021	0.86	-0.2
22,740	+		CCNA_00021	0.87	-0.7
22,740	+		CCNA_00021	0.87	-1.5
22,748	-		CCNA_00021	0.87	+0.2
22,748	-		CCNA_00021	0.87	+2.1
22,769	-		CCNA_00021	0.88	-1.0
22,787	+		CCNA_00021	0.89	-2.2
22,800	+		CCNA_00021	0.89	-2.4
22,815	+				+1.1
22,860	+				-1.7
22,860	+				-1.0
22,873	+				+0.3
22,873	+				+0.4
22,873	+				-1.5
22,873	+				-0.3
22,881	-				-0.6
22,881	-				-1.3
22,881	-				-1.9
22,918	-				+0.7
22,924	+				-1.2
22,972	-				+1.5
22,988	+				-1.1
23,008	-				-2.2
23,050	-				-2.6
23,090	+		CCNA_00022	0.11	+2.1
23,220	-		CCNA_00022	0.36	+0.2
23,232	+		CCNA_00022	0.38	+1.2
23,273	-		CCNA_00022	0.46	-2.7
23,297	+		CCNA_00022	0.50	-0.1
23,305	-		CCNA_00022	0.52	-2.8
23,307	+		CCNA_00022	0.52	+1.5
23,310	-		CCNA_00022	0.53	-0.3
23,326	+		CCNA_00022	0.56	-2.0
23,342	+		CCNA_00022	0.59	-2.9
23,366	+		CCNA_00022	0.63	-2.9
23,415	-		CCNA_00022	0.73	-0.5
23,415	-		CCNA_00022	0.73	-1.3
23,433	+		CCNA_00022	0.76	-1.2
23,462	+		CCNA_00022	0.82	-0.7
23,491	+		CCNA_00022	0.87	-1.0
23,491	+		CCNA_00022	0.87	-0.7
23,491	+		CCNA_00022	0.87	+0.5
23,494	-		CCNA_00022	0.88	+0.4
23,494	-		CCNA_00022	0.88	-1.6
23,548	+				-1.1
23,548	+				-1.1
23,548	+				+0.4
23,556	-				+1.5
23,556	-				-0.7
23,556	-				-1.1
23,556	-				-0.5
23,598	+				-1.3
23,607	+				+1.9
23,609	+				+1.9
23,609	+				-2.7
23,627	-				+0.5
23,627	-				+1.3
23,632	-				-0.6
23,666	+				+3.5
23,674	-				-0.8
23,723	+				+1.6
23,724	+				-3.4
23,732	-				-0.1
23,739	+				-0.6
23,876	+		CCNA_00023	0.40	+3.2
23,919	-		CCNA_00023	0.53	-0.3
23,965	+		CCNA_00023	0.67	+0.9
23,993	+		CCNA_00023	0.75	+0.1
24,001	-		CCNA_00023	0.78	+4.6
24,019	-		CCNA_00023	0.83	-0.3
24,020	-		CCNA_00023	0.83	-1.2