Experiment: MoYLS4 with Tungstate 4mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0982 and DVU0983 are separated by 1 nucleotides DVU0983 and miaB overlap by 7 nucleotides miaB and DORF8626 are separated by 132 nucleotides DORF8626 and DVU0987 are separated by 191 nucleotides
DVU0982: DVU0982 - PHP domain protein (TIGR), at 1,079,062 to 1,079,721
DVU0982
DVU0983: DVU0983 - conserved hypothetical protein (TIGR), at 1,079,723 to 1,080,268
DVU0983
DVU0984: miaB - tRNA-i(6)A37 modification enzyme MiaB (TIGR), at 1,080,262 to 1,081,611
miaB
DORF8626: DORF8626 - no description, at 1,081,744 to 1,081,989
DORF8626
DVU0987: DVU0987 - heavy metal-binding domain protein (TIGR), at 1,082,181 to 1,082,384
DVU0987
Position (kb)
1080
1081
1082 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1079.282 kb on - strand, within DVU0982 at 1079.339 kb on - strand, within DVU0982 at 1079.374 kb on + strand, within DVU0982 at 1079.422 kb on + strand, within DVU0982 at 1079.431 kb on - strand, within DVU0982 at 1079.555 kb on - strand, within DVU0982 at 1079.656 kb on + strand at 1079.808 kb on + strand, within DVU0983 at 1079.813 kb on + strand, within DVU0983 at 1079.821 kb on - strand, within DVU0983 at 1079.935 kb on + strand, within DVU0983 at 1080.086 kb on - strand, within DVU0983 at 1080.272 kb on + strand at 1080.285 kb on - strand at 1080.310 kb on - strand at 1080.334 kb on - strand at 1080.345 kb on + strand at 1080.345 kb on + strand at 1080.353 kb on - strand at 1080.381 kb on - strand at 1080.502 kb on + strand, within miaB at 1080.512 kb on + strand, within miaB at 1080.512 kb on + strand, within miaB at 1080.521 kb on + strand, within miaB at 1080.536 kb on + strand, within miaB at 1080.582 kb on + strand, within miaB at 1080.590 kb on - strand, within miaB at 1080.673 kb on - strand, within miaB at 1080.721 kb on - strand, within miaB at 1080.799 kb on + strand, within miaB at 1080.868 kb on - strand, within miaB at 1080.892 kb on - strand, within miaB at 1080.924 kb on - strand, within miaB at 1081.012 kb on + strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.047 kb on - strand, within miaB at 1081.086 kb on + strand, within miaB at 1081.094 kb on - strand, within miaB at 1081.124 kb on + strand, within miaB at 1081.151 kb on + strand, within miaB at 1081.194 kb on - strand, within miaB at 1081.432 kb on + strand, within miaB at 1081.441 kb on - strand, within miaB at 1081.456 kb on + strand, within miaB at 1081.466 kb on + strand, within miaB at 1081.487 kb on + strand at 1081.487 kb on + strand at 1081.535 kb on - strand at 1081.598 kb on + strand at 1081.662 kb on - strand at 1081.669 kb on - strand at 1081.676 kb on + strand at 1081.800 kb on - strand, within DORF8626 at 1081.806 kb on - strand, within DORF8626 at 1081.859 kb on + strand, within DORF8626 at 1081.869 kb on + strand, within DORF8626 at 1081.869 kb on + strand, within DORF8626 at 1081.874 kb on + strand, within DORF8626 at 1081.877 kb on - strand, within DORF8626 at 1081.877 kb on - strand, within DORF8626 at 1081.877 kb on - strand, within DORF8626 at 1081.877 kb on - strand, within DORF8626 at 1081.879 kb on + strand, within DORF8626 at 1081.887 kb on - strand, within DORF8626 at 1081.944 kb on - strand, within DORF8626 at 1081.965 kb on - strand at 1082.016 kb on + strand at 1082.024 kb on - strand at 1082.042 kb on - strand at 1082.065 kb on - strand at 1082.115 kb on + strand at 1082.147 kb on + strand at 1082.196 kb on - strand at 1082.196 kb on - strand at 1082.243 kb on + strand, within DVU0987 at 1082.308 kb on + strand, within DVU0987 at 1082.316 kb on - strand, within DVU0987 at 1082.417 kb on - strand at 1082.541 kb on - strand at 1082.543 kb on + strand at 1082.551 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Tungstate 4mM remove 1,079,282 - DVU0982 0.33 -0.7 1,079,339 - DVU0982 0.42 +0.2 1,079,374 + DVU0982 0.47 +0.0 1,079,422 + DVU0982 0.55 -0.2 1,079,431 - DVU0982 0.56 -0.1 1,079,555 - DVU0982 0.75 +0.2 1,079,656 + -0.4 1,079,808 + DVU0983 0.16 +0.5 1,079,813 + DVU0983 0.16 -1.2 1,079,821 - DVU0983 0.18 +0.2 1,079,935 + DVU0983 0.39 +0.5 1,080,086 - DVU0983 0.66 -1.7 1,080,272 + -2.5 1,080,285 - -0.8 1,080,310 - -1.0 1,080,334 - -1.8 1,080,345 + -0.4 1,080,345 + +0.7 1,080,353 - +0.3 1,080,381 - -0.4 1,080,502 + miaB DVU0984 0.18 -0.5 1,080,512 + miaB DVU0984 0.19 -0.7 1,080,512 + miaB DVU0984 0.19 -1.4 1,080,521 + miaB DVU0984 0.19 -1.0 1,080,536 + miaB DVU0984 0.20 -0.5 1,080,582 + miaB DVU0984 0.24 -1.3 1,080,590 - miaB DVU0984 0.24 -0.1 1,080,673 - miaB DVU0984 0.30 -2.4 1,080,721 - miaB DVU0984 0.34 -0.8 1,080,799 + miaB DVU0984 0.40 -1.8 1,080,868 - miaB DVU0984 0.45 -0.8 1,080,892 - miaB DVU0984 0.47 -2.6 1,080,924 - miaB DVU0984 0.49 -0.6 1,081,012 + miaB DVU0984 0.56 -1.0 1,081,047 - miaB DVU0984 0.58 -1.3 1,081,047 - miaB DVU0984 0.58 -0.6 1,081,047 - miaB DVU0984 0.58 -2.0 1,081,086 + miaB DVU0984 0.61 -0.1 1,081,094 - miaB DVU0984 0.62 -1.3 1,081,124 + miaB DVU0984 0.64 -0.4 1,081,151 + miaB DVU0984 0.66 -0.5 1,081,194 - miaB DVU0984 0.69 -0.2 1,081,432 + miaB DVU0984 0.87 -0.4 1,081,441 - miaB DVU0984 0.87 -0.9 1,081,456 + miaB DVU0984 0.88 -0.2 1,081,466 + miaB DVU0984 0.89 -0.0 1,081,487 + +1.0 1,081,487 + -0.8 1,081,535 - -1.5 1,081,598 + -0.4 1,081,662 - +0.6 1,081,669 - -1.0 1,081,676 + +1.4 1,081,800 - DORF8626 0.23 +0.1 1,081,806 - DORF8626 0.25 +0.6 1,081,859 + DORF8626 0.47 -0.4 1,081,869 + DORF8626 0.51 -0.2 1,081,869 + DORF8626 0.51 -0.4 1,081,874 + DORF8626 0.53 +0.3 1,081,877 - DORF8626 0.54 +1.0 1,081,877 - DORF8626 0.54 -0.9 1,081,877 - DORF8626 0.54 -0.4 1,081,877 - DORF8626 0.54 -0.3 1,081,879 + DORF8626 0.55 -1.5 1,081,887 - DORF8626 0.58 -1.7 1,081,944 - DORF8626 0.81 -1.2 1,081,965 - -0.5 1,082,016 + -0.5 1,082,024 - -1.0 1,082,042 - -0.0 1,082,065 - +0.2 1,082,115 + -2.2 1,082,147 + -0.2 1,082,196 - +0.6 1,082,196 - +0.6 1,082,243 + DVU0987 0.30 +1.3 1,082,308 + DVU0987 0.62 +0.5 1,082,316 - DVU0987 0.66 +1.3 1,082,417 - -0.6 1,082,541 - -2.0 1,082,543 + +1.3 1,082,551 - +2.3
Or see this region's nucleotide sequence