Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4211

Experiment: D-Gluconic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic (C)
5,015,895	-				-0.4
5,015,895	-				+0.6
5,015,914	-				-1.0
5,015,931	+				-0.3
5,015,932	-				+1.1
5,016,016	+				+0.0
5,016,017	-				+0.7
5,016,075	+				+2.6
5,016,075	+				+0.6
5,016,076	-				+0.4
5,016,076	-				+1.1
5,016,084	+				-1.8
5,016,084	+				+1.5
5,016,084	+				+0.7
5,016,084	+				-1.0
5,016,084	+				+3.1
5,016,084	+				+0.8
5,016,084	+				-0.1
5,016,084	+				+0.5
5,016,084	+				-1.1
5,016,085	-				-0.8
5,016,085	-				-0.6
5,016,085	-				+0.5
5,016,085	-				+2.2
5,016,085	-				+1.0
5,016,085	-				+0.2
5,016,085	-				+0.0
5,016,085	-				-1.3
5,016,085	-				+1.9
5,016,087	+				-0.4
5,016,088	-				+0.5
5,016,088	-				+1.4
5,016,138	+				+0.6
5,016,138	+				-0.6
5,016,138	+				-0.1
5,016,138	+				+0.2
5,016,138	+				+0.4
5,016,138	+				+0.6
5,016,138	+				-0.0
5,016,138	+				+1.5
5,016,138	+				-0.7
5,016,138	+				-2.1
5,016,138	+				+1.0
5,016,138	+				-1.6
5,016,139	-				-1.0
5,016,139	-				-0.6
5,016,139	-				+0.0
5,016,139	-				+0.9
5,016,139	-				-0.9
5,016,139	-				+0.0
5,016,225	+		Psyr_4211	0.16	+1.3
5,016,225	+		Psyr_4211	0.16	+1.6
5,016,225	+		Psyr_4211	0.16	+0.6
5,016,225	+		Psyr_4211	0.16	+0.0
5,016,225	+		Psyr_4211	0.16	-0.8
5,016,225	+		Psyr_4211	0.16	+0.6
5,016,225	+		Psyr_4211	0.16	+0.7
5,016,225	+		Psyr_4211	0.16	-0.2
5,016,225	+		Psyr_4211	0.16	-0.7
5,016,225	+		Psyr_4211	0.16	+0.0
5,016,225	+		Psyr_4211	0.16	+0.0
5,016,225	+		Psyr_4211	0.16	+1.8
5,016,225	+		Psyr_4211	0.16	-0.5
5,016,225	+		Psyr_4211	0.16	-2.6
5,016,225	+		Psyr_4211	0.16	-0.5
5,016,225	+		Psyr_4211	0.16	-0.6
5,016,226	-		Psyr_4211	0.16	-0.6
5,016,226	-		Psyr_4211	0.16	+0.2
5,016,226	-		Psyr_4211	0.16	+0.4
5,016,226	-		Psyr_4211	0.16	-0.3
5,016,226	-		Psyr_4211	0.16	-0.6
5,016,226	-		Psyr_4211	0.16	-0.9
5,016,226	-		Psyr_4211	0.16	-1.0
5,016,226	-		Psyr_4211	0.16	+0.6
5,016,226	-		Psyr_4211	0.16	-2.0
5,016,226	-		Psyr_4211	0.16	+1.0
5,016,226	-		Psyr_4211	0.16	-2.0
5,016,226	-		Psyr_4211	0.16	-0.3
5,016,226	-		Psyr_4211	0.16	-0.4
5,016,226	-		Psyr_4211	0.16	+1.0
5,016,226	-		Psyr_4211	0.16	+1.9
5,016,226	-		Psyr_4211	0.16	-1.1
5,016,229	+		Psyr_4211	0.16	-0.4
5,016,229	+		Psyr_4211	0.16	-2.3
5,016,229	+		Psyr_4211	0.16	-1.6
5,016,230	-		Psyr_4211	0.16	-0.6
5,016,230	-		Psyr_4211	0.16	-0.7
5,016,230	-		Psyr_4211	0.16	-0.1
5,016,230	-		Psyr_4211	0.16	-0.5
5,016,297	+		Psyr_4211	0.20	-1.7
5,016,297	+		Psyr_4211	0.20	+1.8
5,016,297	+		Psyr_4211	0.20	+2.2
5,016,297	+		Psyr_4211	0.20	-1.2
5,016,297	+		Psyr_4211	0.20	+1.9
5,016,297	+		Psyr_4211	0.20	+2.8
5,016,297	+		Psyr_4211	0.20	+1.0
5,016,297	+		Psyr_4211	0.20	-0.6
5,016,297	+		Psyr_4211	0.20	+1.3
5,016,297	+		Psyr_4211	0.20	+0.0
5,016,298	-		Psyr_4211	0.20	-0.3
5,016,298	-		Psyr_4211	0.20	-1.0
5,016,298	-		Psyr_4211	0.20	+0.9
5,016,298	-		Psyr_4211	0.20	+1.4
5,016,298	-		Psyr_4211	0.20	+0.8
5,016,298	-		Psyr_4211	0.20	+0.0
5,016,298	-		Psyr_4211	0.20	-2.0
5,016,298	-		Psyr_4211	0.20	-2.0
5,016,298	-		Psyr_4211	0.20	-0.6
5,016,298	-		Psyr_4211	0.20	+1.4
5,016,298	-		Psyr_4211	0.20	+0.7
5,016,298	-		Psyr_4211	0.20	-3.1
5,016,315	+		Psyr_4211	0.21	+1.0
5,016,315	+		Psyr_4211	0.21	-0.4
5,016,453	+		Psyr_4211	0.31	+0.2
5,016,453	+		Psyr_4211	0.31	+0.4
5,016,453	+		Psyr_4211	0.31	+0.3
5,016,453	+		Psyr_4211	0.31	+0.9
5,016,453	+		Psyr_4211	0.31	+0.9
5,016,453	+		Psyr_4211	0.31	-1.4
5,016,454	-		Psyr_4211	0.31	+0.4
5,016,454	-		Psyr_4211	0.31	-0.6
5,016,454	-		Psyr_4211	0.31	+0.0
5,016,454	-		Psyr_4211	0.31	+0.6
5,016,454	-		Psyr_4211	0.31	+0.7
5,016,454	-		Psyr_4211	0.31	-0.6
5,016,516	+		Psyr_4211	0.35	+0.0
5,016,517	-		Psyr_4211	0.35	+0.6
5,016,541	-		Psyr_4211	0.36	-2.3
5,016,541	-		Psyr_4211	0.36	+0.9
5,016,972	+		Psyr_4211	0.65	+0.9
5,016,972	+		Psyr_4211	0.65	+0.3
5,016,973	-		Psyr_4211	0.65	+0.0
5,016,973	-		Psyr_4211	0.65	-0.8
5,016,973	-		Psyr_4211	0.65	+0.6
5,017,085	-		Psyr_4211	0.72	-1.4
5,017,122	+		Psyr_4211	0.75	-1.3
5,017,239	+		Psyr_4211	0.82	-1.7
5,017,239	+		Psyr_4211	0.82	-2.6
5,017,240	-		Psyr_4211	0.83	-3.4
5,017,240	-		Psyr_4211	0.83	-1.0
5,017,310	+		Psyr_4211	0.87	-2.3
5,017,310	+		Psyr_4211	0.87	+2.4
5,017,310	+		Psyr_4211	0.87	+0.4
5,017,311	-		Psyr_4211	0.87	-1.0
5,017,311	-		Psyr_4211	0.87	-2.6
5,017,329	+		Psyr_4211	0.88	-1.3
5,017,329	+		Psyr_4211	0.88	+1.0
5,017,330	-		Psyr_4211	0.88	+0.2
5,017,330	-		Psyr_4211	0.88	-0.3
5,017,330	-		Psyr_4211	0.88	-0.6
5,017,504	+				-0.5
5,017,504	+				+0.0
5,017,505	-				+0.0
5,017,505	-				+0.7
5,017,778	+		Psyr_4212	0.23	+1.6
5,017,778	+		Psyr_4212	0.23	-0.9
5,017,779	-		Psyr_4212	0.23	+0.2
5,017,841	+		Psyr_4212	0.29	-0.2
5,017,841	+		Psyr_4212	0.29	+0.4
5,017,841	+		Psyr_4212	0.29	-0.5
5,017,841	+		Psyr_4212	0.29	+1.6
5,017,841	+		Psyr_4212	0.29	+0.2
5,017,841	+		Psyr_4212	0.29	+1.0
5,017,841	+		Psyr_4212	0.29	-0.2
5,017,841	+		Psyr_4212	0.29	+1.0
5,017,841	+		Psyr_4212	0.29	+1.0
5,017,841	+		Psyr_4212	0.29	-0.2
5,017,842	-		Psyr_4212	0.29	-0.2
5,017,842	-		Psyr_4212	0.29	-1.3
5,017,842	-		Psyr_4212	0.29	-1.7
5,017,842	-		Psyr_4212	0.29	+0.6
5,017,842	-		Psyr_4212	0.29	-0.4
5,017,842	-		Psyr_4212	0.29	-1.8
5,017,842	-		Psyr_4212	0.29	+0.8
5,018,325	+		Psyr_4212	0.78	-1.1
5,018,326	-		Psyr_4212	0.79	-0.3
5,018,326	-		Psyr_4212	0.79	+0.0
5,018,326	-		Psyr_4212	0.79	+0.0