Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_80

Experiment: Manganese (II) chloride tetrahydrate 0.00078125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 0.00078125 M
123,834	+				+0.1
123,848	+				+0.5
123,851	+				-1.0
123,852	-				+1.5
123,852	-				-0.0
123,990	+		Pf6N2E2_80	0.14	-2.4
123,990	+		Pf6N2E2_80	0.14	-0.7
123,991	-		Pf6N2E2_80	0.14	+0.4
123,991	-		Pf6N2E2_80	0.14	-1.1
123,992	+		Pf6N2E2_80	0.15	+1.3
123,993	-		Pf6N2E2_80	0.15	+0.9
123,993	-		Pf6N2E2_80	0.15	-2.5
123,993	-		Pf6N2E2_80	0.15	-0.8
123,993	-		Pf6N2E2_80	0.15	+0.1
124,028	+		Pf6N2E2_80	0.18	+0.3
124,029	-		Pf6N2E2_80	0.18	-1.7
124,029	-		Pf6N2E2_80	0.18	-0.2
124,029	-		Pf6N2E2_80	0.18	+0.1
124,029	-		Pf6N2E2_80	0.18	+0.0
124,035	+		Pf6N2E2_80	0.18	+1.0
124,190	+		Pf6N2E2_80	0.31	+0.1
124,191	-		Pf6N2E2_80	0.31	-0.3
124,191	-		Pf6N2E2_80	0.31	-1.2
124,192	+		Pf6N2E2_80	0.31	+0.5
124,192	+		Pf6N2E2_80	0.31	-0.6
124,192	+		Pf6N2E2_80	0.31	-1.1
124,193	-		Pf6N2E2_80	0.31	-1.5
124,193	-		Pf6N2E2_80	0.31	-0.7
124,193	-		Pf6N2E2_80	0.31	-0.4
124,193	-		Pf6N2E2_80	0.31	-0.3
124,193	-		Pf6N2E2_80	0.31	-0.9
124,193	-		Pf6N2E2_80	0.31	-0.5
124,242	-		Pf6N2E2_80	0.36	-0.4
124,254	-		Pf6N2E2_80	0.37	+0.2
124,254	-		Pf6N2E2_80	0.37	-1.2
124,254	-		Pf6N2E2_80	0.37	+0.3
124,254	-		Pf6N2E2_80	0.37	-0.5
124,254	-		Pf6N2E2_80	0.37	-1.1
124,254	-		Pf6N2E2_80	0.37	+0.7
124,274	+		Pf6N2E2_80	0.38	-1.5
124,293	+		Pf6N2E2_80	0.40	-0.9
124,294	-		Pf6N2E2_80	0.40	+0.8
124,388	+		Pf6N2E2_80	0.48	-0.3
124,388	+		Pf6N2E2_80	0.48	-1.1
124,440	+		Pf6N2E2_80	0.52	-0.4
124,441	-		Pf6N2E2_80	0.52	-0.9
124,493	+		Pf6N2E2_80	0.57	+0.6
124,494	-		Pf6N2E2_80	0.57	-1.4
124,494	-		Pf6N2E2_80	0.57	-1.1
124,494	-		Pf6N2E2_80	0.57	-0.5
124,557	+		Pf6N2E2_80	0.62	-0.4
124,558	-		Pf6N2E2_80	0.62	+0.2
124,558	-		Pf6N2E2_80	0.62	+0.9
124,572	+		Pf6N2E2_80	0.63	+0.7
124,592	+		Pf6N2E2_80	0.65	-1.4
124,592	+		Pf6N2E2_80	0.65	+0.9
124,592	+				+1.5
124,592	+		Pf6N2E2_80	0.65	-0.2
124,593	-		Pf6N2E2_80	0.65	-1.1
124,593	-		Pf6N2E2_80	0.65	-0.4
124,593	-		Pf6N2E2_80	0.65	-0.2
124,593	-		Pf6N2E2_80	0.65	-2.4
124,593	-		Pf6N2E2_80	0.65	-0.8
124,621	-		Pf6N2E2_80	0.68	-0.5
124,650	+		Pf6N2E2_80	0.70	-0.2
124,669	+		Pf6N2E2_80	0.72	-0.4
124,724	-		Pf6N2E2_80	0.76	+0.8
124,758	-		Pf6N2E2_80	0.79	+1.2
124,866	+		Pf6N2E2_80	0.88	+1.0
124,868	+		Pf6N2E2_80	0.88	-0.1
124,868	+		Pf6N2E2_80	0.88	-0.2
124,869	-		Pf6N2E2_80	0.89	+1.5
124,869	-		Pf6N2E2_80	0.89	-1.1
124,869	-		Pf6N2E2_80	0.89	+0.0
124,875	+		Pf6N2E2_80	0.89	-0.4
125,076	-				-1.6
125,076	-				+0.0
125,087	+				-1.4
125,087	+				+0.4
125,087	+				-0.6
125,146	+				-0.6
125,229	+				-0.3
125,430	+				+0.5
125,436	+				+0.1
125,436	+				-0.7
125,436	+				+1.3
125,436	+				+0.8
125,437	-				-1.5
125,437	-				+1.3
125,437	-				+0.5
125,437	-				-0.2
125,437	-				+0.7
125,483	+				-1.1
125,483	+				+1.2
125,507	+				+0.4
125,507	+				+0.4
125,508	-				+0.1
125,592	+				+0.9
125,592	+				+0.2
125,592	+				-0.4
125,592	+				+1.2
125,592	+				-0.4
125,592	+				+0.3
125,593	-				+1.3
125,628	+				-0.9
125,629	-				-1.1
125,629	-				+0.2
125,742	+				-0.7
125,742	+				+1.1
125,749	+				+0.5
125,749	+				-0.2
125,749	+				-0.4
125,749	+				-0.3
125,749	+				-0.4
125,749	+				-0.6
125,750	-				-0.8
125,782	+				+0.3
125,783	-				-1.1
125,783	-				+0.6
125,783	-				+0.9
125,783	-				-1.9
125,844	-				+0.3
125,905	+				+0.3
125,905	+				-0.4
125,929	+				-1.7